RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 BCL9O00512 1426 aa7.79□□□□□ -1.16
CDH13-206ENST00000562601 TOGARAM1Q9Y4F4 1720 aa7.79□□□□□ -1.16
CDH13-206ENST00000562601 ZBTB24O43167 697 aaPredicted RBP7.79□□□□□ -1.16
CDH13-206ENST00000562601 KCNQ4P56696 695 aa7.79□□□□□ -1.16
CDH13-206ENST00000562601 R3HDM1Q15032 1099 aaKnown RBP7.79□□□□□ -1.16
CDH13-206ENST00000562601 PTPRNQ16849 979 aa7.79□□□□□ -1.16
CDH13-206ENST00000562601 COL3A1P02461 1466 aaPredicted RBP7.79□□□□□ -1.16
CDH13-206ENST00000562601 PLSCR1O15162 318 aa7.78□□□□□ -1.16
CDH13-206ENST00000562601 PHKG2P15735 406 aa7.78□□□□□ -1.16
CDH13-206ENST00000562601 SLC19A1P41440 591 aa7.78□□□□□ -1.16
CDH13-206ENST00000562601 RPIAP49247 311 aa7.78□□□□□ -1.16
CDH13-206ENST00000562601 QPCTQ16769 361 aa7.78□□□□□ -1.16
CDH13-206ENST00000562601 TXNRD1Q16881 649 aa7.78□□□□□ -1.16
CDH13-206ENST00000562601 PLEKHO1Q53GL0 409 aaPredicted RBP7.78□□□□□ -1.16
CDH13-206ENST00000562601 ZNF530Q6P9A1 599 aaPredicted RBP7.78□□□□□ -1.16
CDH13-206ENST00000562601 MPRIPQ6WCQ1 1025 aa7.78□□□□□ -1.16
CDH13-206ENST00000562601 NUDT12Q9BQG2 462 aa7.78□□□□□ -1.16
CDH13-206ENST00000562601 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.78□□□□□ -1.16
CDH13-206ENST00000562601 VIRMAQ69YN4 1812 aaKnown RBP7.78□□□□□ -1.16
CDH13-206ENST00000562601 CFAP99D6REC4 459 aa7.77□□□□□ -1.17
CDH13-206ENST00000562601 CCNYL3P0C7X3 344 aa7.77□□□□□ -1.17
CDH13-206ENST00000562601 IFNL2Q8IZJ0 200 aa7.77□□□□□ -1.17
CDH13-206ENST00000562601 CCDC24Q8N4L8 307 aa7.77□□□□□ -1.17
CDH13-206ENST00000562601 TSC1Q92574 1164 aa7.77□□□□□ -1.17
CDH13-206ENST00000562601 CFAP53Q96M91 514 aa7.77□□□□□ -1.17
CDH13-206ENST00000562601 RGPD3A6NKT7 1758 aaPredicted RBP7.76□□□□□ -1.17
CDH13-206ENST00000562601 RGPD4Q7Z3J3 1758 aa7.76□□□□□ -1.17
CDH13-206ENST00000562601 PARD3Q8TEW0 1356 aa7.76□□□□□ -1.17
CDH13-206ENST00000562601 LCE2BO14633 110 aa7.76□□□□□ -1.17
CDH13-206ENST00000562601 NBPF14Q5TI25 921 aa7.76□□□□□ -1.17
CDH13-206ENST00000562601 PPP2R2DQ66LE6 453 aa7.76□□□□□ -1.17
CDH13-206ENST00000562601 PROCA1Q8NCQ7 364 aaPredicted RBP7.76□□□□□ -1.17
CDH13-206ENST00000562601 PIGBQ92521 554 aa7.76□□□□□ -1.17
CDH13-206ENST00000562601 LRRC4BQ9NT99 713 aa7.76□□□□□ -1.17
CDH13-206ENST00000562601 KDRP35968 1356 aa7.75□□□□□ -1.17
CDH13-206ENST00000562601 CD2BP2O95400 341 aaKnown RBP7.75□□□□□ -1.17
CDH13-206ENST00000562601 U2AF1L5P0DN76 240 aaPredicted RBP7.75□□□□□ -1.17
CDH13-206ENST00000562601 U2AF1Q01081 240 aaKnown RBP eCLIP7.75□□□□□ -1.17
CDH13-206ENST00000562601 MTHFSDQ2M296 383 aaKnown RBP7.75□□□□□ -1.17
CDH13-206ENST00000562601 AMOTQ4VCS5 1084 aa7.75□□□□□ -1.17
CDH13-206ENST00000562601 C1orf141Q5JVX7 400 aa7.75□□□□□ -1.17
CDH13-206ENST00000562601 LYPD8Q6UX82 237 aa7.75□□□□□ -1.17
CDH13-206ENST00000562601 LGR6Q9HBX8 967 aa7.75□□□□□ -1.17
CDH13-206ENST00000562601 LY75O60449 1722 aa7.75□□□□□ -1.17
CDH13-206ENST00000562601 SRCAPQ6ZRS2 3230 aa7.74□□□□□ -1.17
CDH13-206ENST00000562601 PRKAR2BP31323 418 aa7.74□□□□□ -1.17
CDH13-206ENST00000562601 RALBP1Q15311 655 aa7.74□□□□□ -1.17
CDH13-206ENST00000562601 RTL5Q5HYW3 569 aaPredicted RBP7.74□□□□□ -1.17
CDH13-206ENST00000562601 PLA2G2CQ5R387 149 aa7.74□□□□□ -1.17
CDH13-206ENST00000562601 SPRYD7Q5W111 196 aa7.74□□□□□ -1.17
CDH13-206ENST00000562601 PHACTR3Q96KR7 559 aa7.74□□□□□ -1.17
CDH13-206ENST00000562601 PDGFDQ9GZP0 370 aaPredicted RBP7.74□□□□□ -1.17
CDH13-206ENST00000562601 STK32BQ9NY57 414 aa7.74□□□□□ -1.17
CDH13-206ENST00000562601 TMOD3Q9NYL9 352 aa7.74□□□□□ -1.17
CDH13-206ENST00000562601 CCNL1Q9UK58 526 aaPredicted RBP7.74□□□□□ -1.17
CDH13-206ENST00000562601 ASAP1Q9ULH1 1129 aa7.74□□□□□ -1.17
CDH13-206ENST00000562601 NUDCQ9Y266 331 aa7.74□□□□□ -1.17
CDH13-206ENST00000562601 KDM6AO15550 1401 aaPredicted RBP7.74□□□□□ -1.17
CDH13-206ENST00000562601 SCN11AQ9UI33 1791 aa7.74□□□□□ -1.17
CDH13-206ENST00000562601 CABP4P57796 275 aa7.73□□□□□ -1.17
CDH13-206ENST00000562601 ZNF827Q17R98 1081 aa7.73□□□□□ -1.17
CDH13-206ENST00000562601 AKAP4Q5JQC9 854 aa7.73□□□□□ -1.17
CDH13-206ENST00000562601 LIAT1Q6ZQX7 453 aa7.73□□□□□ -1.17
CDH13-206ENST00000562601 ZNF598Q86UK7 904 aaKnown RBP7.73□□□□□ -1.17
CDH13-206ENST00000562601 NFATC2IPQ8NCF5 419 aa7.73□□□□□ -1.17
CDH13-206ENST00000562601 DCAF5Q96JK2 942 aa7.73□□□□□ -1.17
CDH13-206ENST00000562601 EVA1BQ9NVM1 165 aa7.73□□□□□ -1.17
CDH13-206ENST00000562601 PALLDQ8WX93 1383 aa7.72□□□□□ -1.17
CDH13-206ENST00000562601 ERVV-2B6SEH9 535 aa7.72□□□□□ -1.17
CDH13-206ENST00000562601 HSP90AB1P08238 724 aaKnown RBP7.72□□□□□ -1.17
CDH13-206ENST00000562601 KCNH2Q12809 1159 aa7.72□□□□□ -1.17
CDH13-206ENST00000562601 SLC15A2Q16348 729 aa7.72□□□□□ -1.17
CDH13-206ENST00000562601 SMIM5Q71RC9 77 aa7.72□□□□□ -1.17
CDH13-206ENST00000562601 ATG3Q9NT62 314 aa7.72□□□□□ -1.17
CDH13-206ENST00000562601 TAF1LQ8IZX4 1826 aa7.72□□□□□ -1.17
CDH13-206ENST00000562601 TUBGCP6Q96RT7 1819 aa7.72□□□□□ -1.17
CDH13-206ENST00000562601 MYBBP1AQ9BQG0 1328 aaKnown RBP7.72□□□□□ -1.17
CDH13-206ENST00000562601 PAPPAQ13219 1627 aa7.71□□□□□ -1.17
CDH13-206ENST00000562601 C5P01031 1676 aa7.71□□□□□ -1.18
CDH13-206ENST00000562601 RNMTO43148 476 aaKnown RBP7.71□□□□□ -1.18
CDH13-206ENST00000562601 ZBTB7AO95365 584 aa7.71□□□□□ -1.18
CDH13-206ENST00000562601 CTHP32929 405 aa7.71□□□□□ -1.18
CDH13-206ENST00000562601 RFC5P40937 340 aa7.71□□□□□ -1.18
CDH13-206ENST00000562601 TRIM32Q13049 653 aa7.71□□□□□ -1.18
CDH13-206ENST00000562601 TMEM259Q4ZIN3 620 aa7.71□□□□□ -1.18
CDH13-206ENST00000562601 SLC27A3Q5K4L6 730 aa7.71□□□□□ -1.18
CDH13-206ENST00000562601 ZNF697Q5TEC3 545 aa7.71□□□□□ -1.18
CDH13-206ENST00000562601 SMARCC1Q92922 1105 aaPredicted RBP7.71□□□□□ -1.18
CDH13-206ENST00000562601 PRKRIP1Q9H875 184 aaPredicted RBP7.71□□□□□ -1.18
CDH13-206ENST00000562601 DLG5Q8TDM6 1919 aa7.7□□□□□ -1.18
CDH13-206ENST00000562601 CASZ1Q86V15 1759 aa7.7□□□□□ -1.18
CDH13-206ENST00000562601 PTCD1O75127 700 aaKnown RBP7.7□□□□□ -1.18
CDH13-206ENST00000562601 SLC39A6Q13433 755 aa7.7□□□□□ -1.18
CDH13-206ENST00000562601 EMID1Q96A84 441 aaPredicted RBP7.7□□□□□ -1.18
CDH13-206ENST00000562601 TFCP2L1Q9NZI6 479 aa7.7□□□□□ -1.18
CDH13-206ENST00000562601 PLEKHG2Q9H7P9 1386 aa7.7□□□□□ -1.18
CDH13-206ENST00000562601 LOC102724428A0A0B4J2F2 783 aa7.69□□□□□ -1.18
CDH13-206ENST00000562601 GNAT3A8MTJ3 354 aa7.69□□□□□ -1.18
CDH13-206ENST00000562601 AP1G2O75843 785 aa7.69□□□□□ -1.18
CDH13-206ENST00000562601 WNT7BP56706 349 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms