RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 USP26Q9BXU7 913 aa11.64□□□□□ -0.55
CDH13-205ENST00000562307 CCDC8Q9H0W5 538 aaPredicted RBP11.64□□□□□ -0.55
CDH13-205ENST00000562307 BCL2L12Q9HB09 334 aa11.64□□□□□ -0.55
CDH13-205ENST00000562307 NIP7Q9Y221 180 aaKnown RBP eCLIP11.64□□□□□ -0.55
CDH13-205ENST00000562307 RTCBQ9Y3I0 505 aaKnown RBP11.64□□□□□ -0.55
CDH13-205ENST00000562307 BCORQ6W2J9 1755 aa11.64□□□□□ -0.55
CDH13-205ENST00000562307 TRIM6-TRIM34B2RNG4 842 aa11.63□□□□□ -0.55
CDH13-205ENST00000562307 GNPATO15228 680 aa11.63□□□□□ -0.55
CDH13-205ENST00000562307 EPB41L2O43491 1005 aaKnown RBP11.63□□□□□ -0.55
CDH13-205ENST00000562307 ATP5JP18859 108 aa11.63□□□□□ -0.55
CDH13-205ENST00000562307 LRRC24Q50LG9 513 aa11.63□□□□□ -0.55
CDH13-205ENST00000562307 CNTROBQ8N137 903 aa11.63□□□□□ -0.55
CDH13-205ENST00000562307 RILPL2Q969X0 211 aa11.63□□□□□ -0.55
CDH13-205ENST00000562307 ZNF594Q96JF6 807 aaPredicted RBP11.63□□□□□ -0.55
CDH13-205ENST00000562307 PUS3Q9BZE2 481 aaKnown RBP11.63□□□□□ -0.55
CDH13-205ENST00000562307 LRRC4BQ9NT99 713 aa11.63□□□□□ -0.55
CDH13-205ENST00000562307 TLR7Q9NYK1 1049 aaKnown RBP11.63□□□□□ -0.55
CDH13-205ENST00000562307 DBNLQ9UJU6 430 aaKnown RBP11.63□□□□□ -0.55
CDH13-205ENST00000562307 RIPOR2Q9Y4F9 1068 aa11.63□□□□□ -0.55
CDH13-205ENST00000562307 RTL9Q8NET4 1388 aa11.63□□□□□ -0.55
CDH13-205ENST00000562307 ANKRD18BA2A2Z9 1011 aa11.62□□□□□ -0.55
CDH13-205ENST00000562307 REC8O95072 547 aa11.62□□□□□ -0.55
CDH13-205ENST00000562307 ADRA2BP18089 450 aa11.62□□□□□ -0.55
CDH13-205ENST00000562307 ITGA6P23229 1130 aa11.62□□□□□ -0.55
CDH13-205ENST00000562307 SLC10A5Q5PT55 438 aa11.62□□□□□ -0.55
CDH13-205ENST00000562307 ARHGEF1Q92888 912 aaKnown RBP11.62□□□□□ -0.55
CDH13-205ENST00000562307 EVI5LQ96CN4 794 aa11.62□□□□□ -0.55
CDH13-205ENST00000562307 ESYT1Q9BSJ8 1104 aa11.62□□□□□ -0.55
CDH13-205ENST00000562307 GREM2Q9H772 168 aa11.62□□□□□ -0.55
CDH13-205ENST00000562307 BRWD3Q6RI45 1802 aa11.62□□□□□ -0.55
CDH13-205ENST00000562307 C4BP0C0L5 1744 aa11.61□□□□□ -0.55
CDH13-205ENST00000562307 TAF1LQ8IZX4 1826 aa11.61□□□□□ -0.55
CDH13-205ENST00000562307 TRIM37O94972 964 aa11.61□□□□□ -0.55
CDH13-205ENST00000562307 RXRBP28702 533 aa11.61□□□□□ -0.55
CDH13-205ENST00000562307 USPL1Q5W0Q7 1092 aa11.61□□□□□ -0.55
CDH13-205ENST00000562307 TICAM2Q86XR7 235 aa11.61□□□□□ -0.55
CDH13-205ENST00000562307 KIF2CQ99661 725 aa11.61□□□□□ -0.55
CDH13-205ENST00000562307 CEP126Q9P2H0 1117 aa11.61□□□□□ -0.55
CDH13-205ENST00000562307 AKAP2Q9Y2D5 859 aa11.61□□□□□ -0.55
CDH13-205ENST00000562307 SCN7AQ01118 1682 aa11.61□□□□□ -0.55
CDH13-205ENST00000562307 PLSCR1O15162 318 aa11.6□□□□□ -0.55
CDH13-205ENST00000562307 ZPR1O75312 459 aa11.6□□□□□ -0.55
CDH13-205ENST00000562307 HCLS1P14317 486 aaPredicted RBP11.6□□□□□ -0.55
CDH13-205ENST00000562307 TAF7LQ5H9L4 462 aa11.6□□□□□ -0.55
CDH13-205ENST00000562307 TRAPPC3LQ5T215 181 aa11.6□□□□□ -0.55
CDH13-205ENST00000562307 TBC1D9BQ66K14 1250 aa11.6□□□□□ -0.55
CDH13-205ENST00000562307 AMIGO3Q86WK7 504 aa11.6□□□□□ -0.55
CDH13-205ENST00000562307 DBNDD2Q9BQY9 259 aa11.6□□□□□ -0.55
CDH13-205ENST00000562307 ZNF609O15014 1411 aa11.6□□□□□ -0.55
CDH13-205ENST00000562307 MAP4K4O95819 1239 aaPredicted RBP11.59□□□□□ -0.55
CDH13-205ENST00000562307 TIMM10P62072 90 aa11.59□□□□□ -0.55
CDH13-205ENST00000562307 SF3B3Q15393 1217 aaKnown RBP11.59□□□□□ -0.55
CDH13-205ENST00000562307 CCDC152Q4G0S7 254 aa11.59□□□□□ -0.55
CDH13-205ENST00000562307 LDHAL6AQ6ZMR3 332 aa11.59□□□□□ -0.55
CDH13-205ENST00000562307 SMIM5Q71RC9 77 aa11.59□□□□□ -0.55
CDH13-205ENST00000562307 PROM2Q8N271 834 aa11.59□□□□□ -0.55
CDH13-205ENST00000562307 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.59□□□□□ -0.55
CDH13-205ENST00000562307 CCDC85AQ96PX6 553 aaPredicted RBP11.59□□□□□ -0.55
CDH13-205ENST00000562307 HAUS7Q99871 368 aa11.59□□□□□ -0.55
CDH13-205ENST00000562307 NYXQ9GZU5 481 aa11.59□□□□□ -0.55
CDH13-205ENST00000562307 RGS17Q9UGC6 210 aaPredicted RBP11.59□□□□□ -0.55
CDH13-205ENST00000562307 SRP68Q9UHB9 627 aaKnown RBP11.59□□□□□ -0.55
CDH13-205ENST00000562307 A0A1B0GUL7 405 aa11.58□□□□□ -0.56
CDH13-205ENST00000562307 HIP1O00291 1037 aa11.58□□□□□ -0.56
CDH13-205ENST00000562307 SGSM2O43147 1006 aa11.58□□□□□ -0.56
CDH13-205ENST00000562307 RFC4P35249 363 aa11.58□□□□□ -0.56
CDH13-205ENST00000562307 BECN1Q14457 450 aa11.58□□□□□ -0.56
CDH13-205ENST00000562307 VGLL2Q8N8G2 317 aa11.58□□□□□ -0.56
CDH13-205ENST00000562307 SNX21Q969T3 373 aa11.58□□□□□ -0.56
CDH13-205ENST00000562307 IL17RAQ96F46 866 aa11.58□□□□□ -0.56
CDH13-205ENST00000562307 SETDB2Q96T68 719 aa11.58□□□□□ -0.56
CDH13-205ENST00000562307 BOLA2Q9H3K6 86 aa11.58□□□□□ -0.56
CDH13-205ENST00000562307 SNRKQ9NRH2 765 aa11.58□□□□□ -0.56
CDH13-205ENST00000562307 RIC1Q4ADV7 1423 aa11.58□□□□□ -0.56
CDH13-205ENST00000562307 LRP5O75197 1615 aa11.57□□□□□ -0.56
CDH13-205ENST00000562307 LAMB2P55268 1798 aa11.57□□□□□ -0.56
CDH13-205ENST00000562307 MYH3P11055 1940 aa11.57□□□□□ -0.56
CDH13-205ENST00000562307 FAM177BA6PVY3 158 aa11.57□□□□□ -0.56
CDH13-205ENST00000562307 SSFA2P28290 1259 aa11.57□□□□□ -0.56
CDH13-205ENST00000562307 TXNRD1Q16881 649 aa11.57□□□□□ -0.56
CDH13-205ENST00000562307 ERFEQ4G0M1 354 aa11.57□□□□□ -0.56
CDH13-205ENST00000562307 RUFY2Q8WXA3 655 aa11.57□□□□□ -0.56
CDH13-205ENST00000562307 NEUROD6Q96NK8 337 aa11.57□□□□□ -0.56
CDH13-205ENST00000562307 DDX60Q8IY21 1712 aaKnown RBP11.57□□□□□ -0.56
CDH13-205ENST00000562307 MROH5Q6ZUA9 1318 aa11.57□□□□□ -0.56
CDH13-205ENST00000562307 RFX7Q2KHR2 1363 aa11.56□□□□□ -0.56
CDH13-205ENST00000562307 PDE8BO95263 885 aa11.56□□□□□ -0.56
CDH13-205ENST00000562307 COL24A1Q17RW2 1714 aa11.56□□□□□ -0.56
CDH13-205ENST00000562307 METTL24Q5JXM2 366 aa11.56□□□□□ -0.56
CDH13-205ENST00000562307 TPTE2Q6XPS3 522 aa11.56□□□□□ -0.56
CDH13-205ENST00000562307 ZNF512BQ96KM6 892 aaPredicted RBP11.56□□□□□ -0.56
CDH13-205ENST00000562307 TBC1D2Q9BYX2 928 aa11.56□□□□□ -0.56
CDH13-205ENST00000562307 CNNM1Q9NRU3 951 aa11.56□□□□□ -0.56
CDH13-205ENST00000562307 ABCC12Q96J65 1359 aa11.55□□□□□ -0.56
CDH13-205ENST00000562307 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.55□□□□□ -0.56
CDH13-205ENST00000562307 FGFR2P21802 821 aa11.55□□□□□ -0.56
CDH13-205ENST00000562307 ANAPC15P60006 121 aa11.55□□□□□ -0.56
CDH13-205ENST00000562307 ATP2B3Q16720 1220 aa11.55□□□□□ -0.56
CDH13-205ENST00000562307 POTEAQ6S8J7 498 aa11.55□□□□□ -0.56
CDH13-205ENST00000562307 BICDL1Q6ZP65 573 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms