RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 GMPSP49915 693 aaPredicted RBP13.46□□□□□ -0.25
BBS4-205ENST00000562219 KIAA2012Q0VF49 1180 aa13.46□□□□□ -0.25
BBS4-205ENST00000562219 GRM1Q13255 1194 aa13.46□□□□□ -0.25
BBS4-205ENST00000562219 COPS6Q7L5N1 327 aa13.46□□□□□ -0.25
BBS4-205ENST00000562219 GPR101Q96P66 508 aaPredicted RBP13.46□□□□□ -0.25
BBS4-205ENST00000562219 HCLS1P14317 486 aaPredicted RBP13.45□□□□□ -0.26
BBS4-205ENST00000562219 TMPOP42166 694 aaKnown RBP13.45□□□□□ -0.26
BBS4-205ENST00000562219 TCIRG1Q13488 830 aa13.45□□□□□ -0.26
BBS4-205ENST00000562219 CIAPIN1Q6FI81 312 aa13.45□□□□□ -0.26
BBS4-205ENST00000562219 DDX46Q7L014 1031 aaKnown RBP13.45□□□□□ -0.26
BBS4-205ENST00000562219 MPNDQ8N594 471 aa13.45□□□□□ -0.26
BBS4-205ENST00000562219 XAGE3Q8WTP9 111 aa13.45□□□□□ -0.26
BBS4-205ENST00000562219 ABHD8Q96I13 439 aa13.45□□□□□ -0.26
BBS4-205ENST00000562219 TRMT112Q9UI30 125 aaKnown RBP13.45□□□□□ -0.26
BBS4-205ENST00000562219 PSME4Q14997 1843 aa13.45□□□□□ -0.26
BBS4-205ENST00000562219 SCN9AQ15858 1988 aa13.44□□□□□ -0.26
BBS4-205ENST00000562219 CELF2O95319 508 aaKnown RBP13.44□□□□□ -0.26
BBS4-205ENST00000562219 MAP2K2P36507 400 aa13.44□□□□□ -0.26
BBS4-205ENST00000562219 AIMP1Q12904 312 aaKnown RBP13.44□□□□□ -0.26
BBS4-205ENST00000562219 GRAPQ13588 217 aa13.44□□□□□ -0.26
BBS4-205ENST00000562219 TNIP1Q15025 636 aa13.44□□□□□ -0.26
BBS4-205ENST00000562219 TMC4Q7Z404 712 aa13.44□□□□□ -0.26
BBS4-205ENST00000562219 SAPCD2Q86UD0 394 aa13.44□□□□□ -0.26
BBS4-205ENST00000562219 GRAPLQ8TC17 118 aaPredicted RBP13.44□□□□□ -0.26
BBS4-205ENST00000562219 NECTIN2Q92692 538 aa13.44□□□□□ -0.26
BBS4-205ENST00000562219 PGAP2Q9UHJ9 254 aa13.44□□□□□ -0.26
BBS4-205ENST00000562219 AKAP11Q9UKA4 1901 aa13.43□□□□□ -0.26
BBS4-205ENST00000562219 RAD17O75943 681 aa13.43□□□□□ -0.26
BBS4-205ENST00000562219 RALBP1Q15311 655 aa13.43□□□□□ -0.26
BBS4-205ENST00000562219 ZC3H15Q8WU90 426 aaKnown RBP13.43□□□□□ -0.26
BBS4-205ENST00000562219 HHIPL1Q96JK4 782 aa13.43□□□□□ -0.26
BBS4-205ENST00000562219 BCL2L13Q9BXK5 485 aa13.43□□□□□ -0.26
BBS4-205ENST00000562219 GLIS2Q9BZE0 524 aaPredicted RBP13.43□□□□□ -0.26
BBS4-205ENST00000562219 COL4A1P02462 1669 aa13.43□□□□□ -0.26
BBS4-205ENST00000562219 YDJCA8MPS7 323 aa13.42□□□□□ -0.26
BBS4-205ENST00000562219 AOC2O75106 756 aa13.42□□□□□ -0.26
BBS4-205ENST00000562219 CHPF2Q9P2E5 772 aa13.42□□□□□ -0.26
BBS4-205ENST00000562219 MYH3P11055 1940 aa13.41□□□□□ -0.26
BBS4-205ENST00000562219 CHL1O00533 1208 aa13.41□□□□□ -0.26
BBS4-205ENST00000562219 CA12O43570 354 aa13.41□□□□□ -0.26
BBS4-205ENST00000562219 HIRAP54198 1017 aaPredicted RBP13.41□□□□□ -0.26
BBS4-205ENST00000562219 KRT24Q2M2I5 525 aa13.41□□□□□ -0.26
BBS4-205ENST00000562219 TRPM4Q8TD43 1214 aa13.41□□□□□ -0.26
BBS4-205ENST00000562219 CNOT7Q9UIV1 285 aaKnown RBP13.41□□□□□ -0.26
BBS4-205ENST00000562219 HOXB7P09629 217 aa13.4□□□□□ -0.26
BBS4-205ENST00000562219 BRPF1P55201 1214 aaPredicted RBP13.4□□□□□ -0.26
BBS4-205ENST00000562219 HDGFL1Q5TGJ6 251 aa13.4□□□□□ -0.26
BBS4-205ENST00000562219 CDC37L1Q7L3B6 337 aa13.4□□□□□ -0.26
BBS4-205ENST00000562219 MICALL2Q8IY33 904 aa13.4□□□□□ -0.26
BBS4-205ENST00000562219 PLBD2Q8NHP8 589 aa13.4□□□□□ -0.26
BBS4-205ENST00000562219 ZNF408Q9H9D4 720 aa13.4□□□□□ -0.26
BBS4-205ENST00000562219 TSKSQ9UJT2 592 aa13.4□□□□□ -0.26
BBS4-205ENST00000562219 SPEF2Q9C093 1822 aa13.4□□□□□ -0.26
BBS4-205ENST00000562219 SHTN1A0MZ66 631 aa13.39□□□□□ -0.27
BBS4-205ENST00000562219 H7C1D1 291 aa13.39□□□□□ -0.27
BBS4-205ENST00000562219 NEUROD2Q15784 382 aa13.39□□□□□ -0.27
BBS4-205ENST00000562219 CCDC146Q8IYE0 955 aa13.39□□□□□ -0.27
BBS4-205ENST00000562219 ZNF428Q96B54 188 aa13.39□□□□□ -0.27
BBS4-205ENST00000562219 DBF4Q9UBU7 674 aaPredicted RBP13.39□□□□□ -0.27
BBS4-205ENST00000562219 SF3B3Q15393 1217 aaKnown RBP13.38□□□□□ -0.27
BBS4-205ENST00000562219 WASHC4Q2M389 1173 aa13.38□□□□□ -0.27
BBS4-205ENST00000562219 FAM161AQ3B820 660 aa13.38□□□□□ -0.27
BBS4-205ENST00000562219 ANKRD13DQ6ZTN6 518 aa13.38□□□□□ -0.27
BBS4-205ENST00000562219 DPF2Q92785 391 aa13.38□□□□□ -0.27
BBS4-205ENST00000562219 CELF1Q92879 486 aaKnown RBP13.38□□□□□ -0.27
BBS4-205ENST00000562219 ISCA1Q9BUE6 129 aa13.38□□□□□ -0.27
BBS4-205ENST00000562219 NSFL1CQ9UNZ2 370 aaKnown RBP13.38□□□□□ -0.27
BBS4-205ENST00000562219 TRIM35Q9UPQ4 493 aa13.38□□□□□ -0.27
BBS4-205ENST00000562219 LAS1LQ9Y4W2 734 aaKnown RBP13.38□□□□□ -0.27
BBS4-205ENST00000562219 MYBBP1AQ9BQG0 1328 aaKnown RBP13.38□□□□□ -0.27
BBS4-205ENST00000562219 PSMD14O00487 310 aa13.37□□□□□ -0.27
BBS4-205ENST00000562219 RUNDC1Q96C34 613 aa13.37□□□□□ -0.27
BBS4-205ENST00000562219 FAM89AQ96GI7 184 aa13.37□□□□□ -0.27
BBS4-205ENST00000562219 DBNDD1Q9H9R9 158 aa13.37□□□□□ -0.27
BBS4-205ENST00000562219 ZBTB12Q9Y330 459 aaPredicted RBP13.37□□□□□ -0.27
BBS4-205ENST00000562219 CCDC85CA6NKD9 419 aa13.36□□□□□ -0.27
BBS4-205ENST00000562219 ATP5J2-PTCD1G3V325 749 aa13.36□□□□□ -0.27
BBS4-205ENST00000562219 C6orf229H3BNL8 230 aa13.36□□□□□ -0.27
BBS4-205ENST00000562219 RPS12P25398 132 aaKnown RBP13.36□□□□□ -0.27
BBS4-205ENST00000562219 NOGQ13253 232 aa13.36□□□□□ -0.27
BBS4-205ENST00000562219 SAMD7Q7Z3H4 446 aa13.36□□□□□ -0.27
BBS4-205ENST00000562219 USP48Q86UV5 1035 aa13.36□□□□□ -0.27
BBS4-205ENST00000562219 HYPKQ9NX55 129 aa13.36□□□□□ -0.27
BBS4-205ENST00000562219 POLLQ9UGP5 575 aa13.36□□□□□ -0.27
BBS4-205ENST00000562219 RTL9Q8NET4 1388 aa13.35□□□□□ -0.27
BBS4-205ENST00000562219 ZNF646O15015 1829 aaPredicted RBP13.35□□□□□ -0.27
BBS4-205ENST00000562219 RIMBP2O15034 1052 aa13.35□□□□□ -0.27
BBS4-205ENST00000562219 ECE2O60344 883 aa13.35□□□□□ -0.27
BBS4-205ENST00000562219 HUNKP57058 714 aa13.35□□□□□ -0.27
BBS4-205ENST00000562219 GPSM2P81274 684 aa13.35□□□□□ -0.27
BBS4-205ENST00000562219 WDR43Q15061 677 aaKnown RBP eCLIP13.35□□□□□ -0.27
BBS4-205ENST00000562219 KRT26Q7Z3Y9 468 aa13.35□□□□□ -0.27
BBS4-205ENST00000562219 CFAP44Q96MT7 982 aa13.35□□□□□ -0.27
BBS4-205ENST00000562219 EYA3Q99504 573 aa13.35□□□□□ -0.27
BBS4-205ENST00000562219 ZNF609O15014 1411 aa13.34□□□□□ -0.27
BBS4-205ENST00000562219 IRS4O14654 1257 aaPredicted RBP13.34□□□□□ -0.27
BBS4-205ENST00000562219 EGFRP00533 1210 aa13.34□□□□□ -0.27
BBS4-205ENST00000562219 TRIM28Q13263 835 aaKnown RBP13.34□□□□□ -0.27
BBS4-205ENST00000562219 TBC1D10BQ4KMP7 808 aaPredicted RBP13.34□□□□□ -0.27
BBS4-205ENST00000562219 RTL5Q5HYW3 569 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms