RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 COL4A1P02462 1669 aa28.22■■■□□ 2.11
SYNGR3-202ENST00000562045 NLRP3Q96P20 1036 aa28.21■■■□□ 2.11
SYNGR3-202ENST00000562045 PIM2Q9P1W9 311 aa28.21■■■□□ 2.11
SYNGR3-202ENST00000562045 ALDH1L1O75891 902 aa28.21■■■□□ 2.11
SYNGR3-202ENST00000562045 MYH3P11055 1940 aa28.2■■■□□ 2.1
SYNGR3-202ENST00000562045 ARFGEF1Q9Y6D6 1849 aa28.19■■■□□ 2.1
SYNGR3-202ENST00000562045 CDHR2Q9BYE9 1310 aa28.19■■■□□ 2.1
SYNGR3-202ENST00000562045 ZBTB7BO15156 539 aaPredicted RBP28.19■■■□□ 2.1
SYNGR3-202ENST00000562045 MASTLQ96GX5 879 aa28.19■■■□□ 2.1
SYNGR3-202ENST00000562045 BCS1LQ9Y276 419 aa28.19■■■□□ 2.1
SYNGR3-202ENST00000562045 SLC51AQ86UW1 340 aa28.18■■■□□ 2.1
SYNGR3-202ENST00000562045 NPR1P16066 1061 aa28.18■■■□□ 2.1
SYNGR3-202ENST00000562045 STYK1Q6J9G0 422 aa28.18■■■□□ 2.1
SYNGR3-202ENST00000562045 ZBTB40Q9NUA8 1239 aa28.18■■■□□ 2.1
SYNGR3-202ENST00000562045 GRM8O00222 908 aa28.17■■■□□ 2.1
SYNGR3-202ENST00000562045 NBPF7P0C2Y1 421 aaPredicted RBP28.17■■■□□ 2.1
SYNGR3-202ENST00000562045 GPR162Q16538 588 aa28.17■■■□□ 2.1
SYNGR3-202ENST00000562045 PDZRN3Q9UPQ7 1066 aa28.17■■■□□ 2.1
SYNGR3-202ENST00000562045 DALRD3Q5D0E6 543 aaKnown RBP28.16■■■□□ 2.1
SYNGR3-202ENST00000562045 TTLL6Q8N841 843 aa28.15■■■□□ 2.1
SYNGR3-202ENST00000562045 CCDC85AQ96PX6 553 aaPredicted RBP28.15■■■□□ 2.1
SYNGR3-202ENST00000562045 PDE8AO60658 829 aa28.15■■■□□ 2.1
SYNGR3-202ENST00000562045 HOXA10P31260 410 aaPredicted RBP28.15■■■□□ 2.1
SYNGR3-202ENST00000562045 RPGRQ92834 1020 aaKnown RBP28.15■■■□□ 2.1
SYNGR3-202ENST00000562045 USP44Q9H0E7 712 aa28.15■■■□□ 2.1
SYNGR3-202ENST00000562045 C9orf78Q9NZ63 289 aaPredicted RBP28.15■■■□□ 2.1
SYNGR3-202ENST00000562045 SF3B3Q15393 1217 aaKnown RBP28.14■■■□□ 2.1
SYNGR3-202ENST00000562045 PRPF40BQ6NWY9 871 aaKnown RBP28.14■■■□□ 2.1
SYNGR3-202ENST00000562045 ZNF219Q9P2Y4 722 aaPredicted RBP28.14■■■□□ 2.1
SYNGR3-202ENST00000562045 EPHA10Q5JZY3 1008 aa28.13■■■□□ 2.09
SYNGR3-202ENST00000562045 UTYO14607 1347 aa28.13■■■□□ 2.09
SYNGR3-202ENST00000562045 KAZALD1Q96I82 304 aa28.12■■■□□ 2.09
SYNGR3-202ENST00000562045 OLFM4Q6UX06 510 aa28.12■■■□□ 2.09
SYNGR3-202ENST00000562045 CNKSR1Q969H4 720 aa28.12■■■□□ 2.09
SYNGR3-202ENST00000562045 CTSWP56202 376 aa28.11■■■□□ 2.09
SYNGR3-202ENST00000562045 FOXO4P98177 505 aa28.11■■■□□ 2.09
SYNGR3-202ENST00000562045 TTLL11Q8NHH1 800 aa28.11■■■□□ 2.09
SYNGR3-202ENST00000562045 SUCLG2Q96I99 432 aa28.11■■■□□ 2.09
SYNGR3-202ENST00000562045 SEC31BQ9NQW1 1179 aa28.11■■■□□ 2.09
SYNGR3-202ENST00000562045 RBM17Q96I25 401 aaKnown RBP28.1■■■□□ 2.09
SYNGR3-202ENST00000562045 PLA2G12BQ9BX93 195 aa28.1■■■□□ 2.09
SYNGR3-202ENST00000562045 CRAMP1Q96RY5 1269 aa28.09■■■□□ 2.09
SYNGR3-202ENST00000562045 C21orf2O43822 256 aa28.09■■■□□ 2.09
SYNGR3-202ENST00000562045 C7orf43Q8WVR3 580 aa28.09■■■□□ 2.09
SYNGR3-202ENST00000562045 PCDHB15Q9Y5E8 787 aa28.09■■■□□ 2.09
SYNGR3-202ENST00000562045 CELF1Q92879 486 aaKnown RBP28.08■■■□□ 2.09
SYNGR3-202ENST00000562045 MEIS3Q99687 375 aa28.08■■■□□ 2.09
SYNGR3-202ENST00000562045 GREM2Q9H772 168 aa28.08■■■□□ 2.09
SYNGR3-202ENST00000562045 ALDH1B1P30837 517 aa28.07■■■□□ 2.08
SYNGR3-202ENST00000562045 SPEF2Q9C093 1822 aa28.07■■■□□ 2.08
SYNGR3-202ENST00000562045 GNAI3P08754 354 aa28.06■■■□□ 2.08
SYNGR3-202ENST00000562045 DDX46Q7L014 1031 aaKnown RBP28.06■■■□□ 2.08
SYNGR3-202ENST00000562045 CSF1RP07333 972 aa28.06■■■□□ 2.08
SYNGR3-202ENST00000562045 HSP90B1P14625 803 aaKnown RBP28.06■■■□□ 2.08
SYNGR3-202ENST00000562045 CCDC152Q4G0S7 254 aa28.05■■■□□ 2.08
SYNGR3-202ENST00000562045 FER1L6Q2WGJ9 1857 aa28.05■■■□□ 2.08
SYNGR3-202ENST00000562045 GRAPQ13588 217 aa28.04■■■□□ 2.08
SYNGR3-202ENST00000562045 FAM161AQ3B820 660 aa28.04■■■□□ 2.08
SYNGR3-202ENST00000562045 GRAPLQ8TC17 118 aaPredicted RBP28.04■■■□□ 2.08
SYNGR3-202ENST00000562045 CENPQQ7L2Z9 268 aaPredicted RBP28.04■■■□□ 2.08
SYNGR3-202ENST00000562045 BICC1Q9H694 974 aaKnown RBP28.04■■■□□ 2.08
SYNGR3-202ENST00000562045 PPEF1O14829 653 aaPredicted RBP28.03■■■□□ 2.08
SYNGR3-202ENST00000562045 LMBR1LQ6UX01 489 aa28.03■■■□□ 2.08
SYNGR3-202ENST00000562045 C1orf115Q9H7X2 142 aa28.03■■■□□ 2.08
SYNGR3-202ENST00000562045 KDM2BQ8NHM5 1336 aa28.02■■■□□ 2.08
SYNGR3-202ENST00000562045 ANKRD44Q8N8A2 993 aa28.02■■■□□ 2.08
SYNGR3-202ENST00000562045 RWDD1Q9H446 243 aaPredicted RBP28.02■■■□□ 2.08
SYNGR3-202ENST00000562045 SNED1Q8TER0 1413 aa28.01■■■□□ 2.08
SYNGR3-202ENST00000562045 GRIN3BO60391 1043 aa28.01■■■□□ 2.07
SYNGR3-202ENST00000562045 ARHGAP27Q6ZUM4 889 aa28.01■■■□□ 2.07
SYNGR3-202ENST00000562045 RTL9Q8NET4 1388 aa28■■■□□ 2.07
SYNGR3-202ENST00000562045 LRRC37AA6NMS7 1700 aa28■■■□□ 2.07
SYNGR3-202ENST00000562045 DCAF8L1A6NGE4 600 aa28■■■□□ 2.07
SYNGR3-202ENST00000562045 GNAI2P04899 355 aa28■■■□□ 2.07
SYNGR3-202ENST00000562045 UBTFL1P0CB47 393 aaPredicted RBP28■■■□□ 2.07
SYNGR3-202ENST00000562045 HDAC1Q13547 482 aaPredicted RBP28■■■□□ 2.07
SYNGR3-202ENST00000562045 ITGA6P23229 1130 aa27.99■■■□□ 2.07
SYNGR3-202ENST00000562045 RASSF7Q02833 373 aa27.99■■■□□ 2.07
SYNGR3-202ENST00000562045 SBF1O95248 1867 aa27.99■■■□□ 2.07
SYNGR3-202ENST00000562045 NFKBIEO00221 500 aa27.98■■■□□ 2.07
SYNGR3-202ENST00000562045 BBOX1O75936 387 aa27.98■■■□□ 2.07
SYNGR3-202ENST00000562045 IGHDP01880 384 aa27.98■■■□□ 2.07
SYNGR3-202ENST00000562045 PRELPP51888 382 aa27.98■■■□□ 2.07
SYNGR3-202ENST00000562045 RPS8P62241 208 aaKnown RBP27.98■■■□□ 2.07
SYNGR3-202ENST00000562045 CHMP3Q9Y3E7 222 aa27.98■■■□□ 2.07
SYNGR3-202ENST00000562045 LRRFIP2Q9Y608 721 aaKnown RBP27.98■■■□□ 2.07
SYNGR3-202ENST00000562045 CCDC88AQ3V6T2 1871 aa27.98■■■□□ 2.07
SYNGR3-202ENST00000562045 RABL6Q3YEC7 729 aaPredicted RBP27.98■■■□□ 2.07
SYNGR3-202ENST00000562045 HDAC5Q9UQL6 1122 aa27.98■■■□□ 2.07
SYNGR3-202ENST00000562045 ATP6V0A2Q9Y487 856 aa27.98■■■□□ 2.07
SYNGR3-202ENST00000562045 RPAP2Q8IXW5 612 aaPredicted RBP27.97■■■□□ 2.07
SYNGR3-202ENST00000562045 CHD4Q14839 1912 aa27.96■■■□□ 2.07
SYNGR3-202ENST00000562045 ZNF594Q96JF6 807 aaPredicted RBP27.95■■■□□ 2.07
SYNGR3-202ENST00000562045 CCDC93Q567U6 631 aa27.95■■■□□ 2.06
SYNGR3-202ENST00000562045 CEP85Q6P2H3 762 aa27.94■■■□□ 2.06
SYNGR3-202ENST00000562045 ANKRD18AQ8IVF6 992 aa27.94■■■□□ 2.06
SYNGR3-202ENST00000562045 SP8Q8IXZ3 490 aa27.94■■■□□ 2.06
SYNGR3-202ENST00000562045 LTBP1Q14766 1721 aa27.93■■■□□ 2.06
SYNGR3-202ENST00000562045 DUOX1Q9NRD9 1551 aa27.92■■■□□ 2.06
SYNGR3-202ENST00000562045 IFIT5Q13325 482 aaKnown RBP27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms