RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 ADARB2Q9NS39 739 aaKnown RBP15.42■□□□□ 0.06
NSMCE1-202ENST00000561960 ZBTB12Q9Y330 459 aaPredicted RBP15.42■□□□□ 0.06
NSMCE1-202ENST00000561960 ATP6V0A2Q9Y487 856 aa15.42■□□□□ 0.06
NSMCE1-202ENST00000561960 MAPK8IP3Q9UPT6 1336 aa15.42■□□□□ 0.06
NSMCE1-202ENST00000561960 IBTKQ9P2D0 1353 aaPredicted RBP15.41■□□□□ 0.06
NSMCE1-202ENST00000561960 LRRC37AA6NMS7 1700 aa15.41■□□□□ 0.06
NSMCE1-202ENST00000561960 YDJCA8MPS7 323 aa15.41■□□□□ 0.06
NSMCE1-202ENST00000561960 RGL2O15211 777 aa15.41■□□□□ 0.06
NSMCE1-202ENST00000561960 ECE1P42892 770 aa15.41■□□□□ 0.06
NSMCE1-202ENST00000561960 CIAPIN1Q6FI81 312 aa15.41■□□□□ 0.06
NSMCE1-202ENST00000561960 LRP10Q7Z4F1 713 aa15.41■□□□□ 0.06
NSMCE1-202ENST00000561960 XAGE3Q8WTP9 111 aa15.41■□□□□ 0.06
NSMCE1-202ENST00000561960 ZNRF3Q9ULT6 936 aa15.41■□□□□ 0.06
NSMCE1-202ENST00000561960 SCN9AQ15858 1988 aa15.41■□□□□ 0.06
NSMCE1-202ENST00000561960 SPEF2Q9C093 1822 aa15.4■□□□□ 0.06
NSMCE1-202ENST00000561960 RIMBP2O15034 1052 aa15.4■□□□□ 0.06
NSMCE1-202ENST00000561960 NEUROD2Q15784 382 aa15.4■□□□□ 0.06
NSMCE1-202ENST00000561960 COPS6Q7L5N1 327 aa15.4■□□□□ 0.06
NSMCE1-202ENST00000561960 SAPCD2Q86UD0 394 aa15.4■□□□□ 0.06
NSMCE1-202ENST00000561960 TMX4Q9H1E5 349 aaPredicted RBP15.4■□□□□ 0.06
NSMCE1-202ENST00000561960 LAS1LQ9Y4W2 734 aaKnown RBP15.4■□□□□ 0.06
NSMCE1-202ENST00000561960 EGFRP00533 1210 aa15.39■□□□□ 0.05
NSMCE1-202ENST00000561960 RBM26Q5T8P6 1007 aaKnown RBP15.39■□□□□ 0.05
NSMCE1-202ENST00000561960 SAMD7Q7Z3H4 446 aa15.39■□□□□ 0.05
NSMCE1-202ENST00000561960 USP48Q86UV5 1035 aa15.39■□□□□ 0.05
NSMCE1-202ENST00000561960 CCDC146Q8IYE0 955 aa15.39■□□□□ 0.05
NSMCE1-202ENST00000561960 MPNDQ8N594 471 aa15.39■□□□□ 0.05
NSMCE1-202ENST00000561960 MCOLN1Q9GZU1 580 aa15.39■□□□□ 0.05
NSMCE1-202ENST00000561960 DBNDD1Q9H9R9 158 aa15.39■□□□□ 0.05
NSMCE1-202ENST00000561960 KCNQ5Q9NR82 932 aa15.39■□□□□ 0.05
NSMCE1-202ENST00000561960 TRMT112Q9UI30 125 aaKnown RBP15.39■□□□□ 0.05
NSMCE1-202ENST00000561960 AKAP11Q9UKA4 1901 aa15.39■□□□□ 0.05
NSMCE1-202ENST00000561960 RIPK4P57078 832 aa15.38■□□□□ 0.05
NSMCE1-202ENST00000561960 TBC1D10BQ4KMP7 808 aaPredicted RBP15.38■□□□□ 0.05
NSMCE1-202ENST00000561960 PARP10Q53GL7 1025 aa15.38■□□□□ 0.05
NSMCE1-202ENST00000561960 NLRP10Q86W26 655 aa15.38■□□□□ 0.05
NSMCE1-202ENST00000561960 MICALL2Q8IY33 904 aa15.38■□□□□ 0.05
NSMCE1-202ENST00000561960 CNOT7Q9UIV1 285 aaKnown RBP15.38■□□□□ 0.05
NSMCE1-202ENST00000561960 ADM5C9JUS6 153 aa15.37■□□□□ 0.05
NSMCE1-202ENST00000561960 MLLT1Q03111 559 aaPredicted RBP15.37■□□□□ 0.05
NSMCE1-202ENST00000561960 DOK7Q18PE1 504 aa15.37■□□□□ 0.05
NSMCE1-202ENST00000561960 DDX46Q7L014 1031 aaKnown RBP15.37■□□□□ 0.05
NSMCE1-202ENST00000561960 ATP5J2-PTCD1G3V325 749 aa15.36■□□□□ 0.05
NSMCE1-202ENST00000561960 PSMD14O00487 310 aa15.36■□□□□ 0.05
NSMCE1-202ENST00000561960 KIAA2012Q0VF49 1180 aa15.36■□□□□ 0.05
NSMCE1-202ENST00000561960 DGKZQ13574 1117 aa15.36■□□□□ 0.05
NSMCE1-202ENST00000561960 SCAF8Q9UPN6 1271 aaKnown RBP15.36■□□□□ 0.05
NSMCE1-202ENST00000561960 ASTN2O75129 1339 aaPredicted RBP15.36■□□□□ 0.05
NSMCE1-202ENST00000561960 HUNKP57058 714 aa15.35■□□□□ 0.05
NSMCE1-202ENST00000561960 SP8Q8IXZ3 490 aa15.35■□□□□ 0.05
NSMCE1-202ENST00000561960 CELF1Q92879 486 aaKnown RBP15.35■□□□□ 0.05
NSMCE1-202ENST00000561960 RTFDC1Q9BY42 306 aaPredicted RBP15.35■□□□□ 0.05
NSMCE1-202ENST00000561960 CHPF2Q9P2E5 772 aa15.35■□□□□ 0.05
NSMCE1-202ENST00000561960 GRAPQ13588 217 aa15.34■□□□□ 0.05
NSMCE1-202ENST00000561960 SLC10A5Q5PT55 438 aa15.34■□□□□ 0.05
NSMCE1-202ENST00000561960 SUPT20HQ8NEM7 779 aa15.34■□□□□ 0.05
NSMCE1-202ENST00000561960 GRAPLQ8TC17 118 aaPredicted RBP15.34■□□□□ 0.05
NSMCE1-202ENST00000561960 FAM89AQ96GI7 184 aa15.34■□□□□ 0.05
NSMCE1-202ENST00000561960 C6orf229H3BNL8 230 aa15.33■□□□□ 0.04
NSMCE1-202ENST00000561960 MAP2K2P36507 400 aa15.33■□□□□ 0.04
NSMCE1-202ENST00000561960 GPSM2P81274 684 aa15.33■□□□□ 0.04
NSMCE1-202ENST00000561960 TNIP1Q15025 636 aa15.33■□□□□ 0.04
NSMCE1-202ENST00000561960 GRIPAP1Q4V328 841 aa15.33■□□□□ 0.04
NSMCE1-202ENST00000561960 JARID2Q92833 1246 aaPredicted RBP15.33■□□□□ 0.04
NSMCE1-202ENST00000561960 NSFL1CQ9UNZ2 370 aaKnown RBP15.33■□□□□ 0.04
NSMCE1-202ENST00000561960 ERBB4Q15303 1308 aa15.33■□□□□ 0.04
NSMCE1-202ENST00000561960 SH3TC1Q8TE82 1336 aa15.33■□□□□ 0.04
NSMCE1-202ENST00000561960 H7C1D1 291 aa15.32■□□□□ 0.04
NSMCE1-202ENST00000561960 BBOX1O75936 387 aa15.32■□□□□ 0.04
NSMCE1-202ENST00000561960 SLC34A2O95436 690 aa15.32■□□□□ 0.04
NSMCE1-202ENST00000561960 SOX10P56693 466 aa15.32■□□□□ 0.04
NSMCE1-202ENST00000561960 TCIRG1Q13488 830 aa15.32■□□□□ 0.04
NSMCE1-202ENST00000561960 CCDC85AQ96PX6 553 aaPredicted RBP15.32■□□□□ 0.04
NSMCE1-202ENST00000561960 POLLQ9UGP5 575 aa15.32■□□□□ 0.04
NSMCE1-202ENST00000561960 ECE2O60344 883 aa15.31■□□□□ 0.04
NSMCE1-202ENST00000561960 TMPOP42166 694 aaKnown RBP15.31■□□□□ 0.04
NSMCE1-202ENST00000561960 BRPF1P55201 1214 aaPredicted RBP15.31■□□□□ 0.04
NSMCE1-202ENST00000561960 WASHC4Q2M389 1173 aa15.31■□□□□ 0.04
NSMCE1-202ENST00000561960 CDC37L1Q7L3B6 337 aa15.31■□□□□ 0.04
NSMCE1-202ENST00000561960 KRT26Q7Z3Y9 468 aa15.31■□□□□ 0.04
NSMCE1-202ENST00000561960 RTL9Q8NET4 1388 aa15.31■□□□□ 0.04
NSMCE1-202ENST00000561960 PDE4DIPQ5VU43 2346 aa15.31■□□□□ 0.04
NSMCE1-202ENST00000561960 PGAP2Q9UHJ9 254 aa15.3■□□□□ 0.04
NSMCE1-202ENST00000561960 PSME4Q14997 1843 aa15.29■□□□□ 0.04
NSMCE1-202ENST00000561960 SEC31BQ9NQW1 1179 aa15.29■□□□□ 0.04
NSMCE1-202ENST00000561960 CENPFP49454 3210 aa15.28■□□□□ 0.04
NSMCE1-202ENST00000561960 FAM155AB1AL88 458 aaPredicted RBP15.28■□□□□ 0.04
NSMCE1-202ENST00000561960 TRPA1O75762 1119 aa15.28■□□□□ 0.04
NSMCE1-202ENST00000561960 ZNF157P51786 506 aaPredicted RBP15.28■□□□□ 0.04
NSMCE1-202ENST00000561960 KIF23Q02241 960 aaPredicted RBP15.28■□□□□ 0.04
NSMCE1-202ENST00000561960 HSP90AB3PQ58FF7 597 aa15.28■□□□□ 0.04
NSMCE1-202ENST00000561960 HDGFL1Q5TGJ6 251 aa15.28■□□□□ 0.04
NSMCE1-202ENST00000561960 VPS33BQ9H267 617 aa15.28■□□□□ 0.04
NSMCE1-202ENST00000561960 GBA2Q9HCG7 927 aaPredicted RBP15.28■□□□□ 0.04
NSMCE1-202ENST00000561960 GGA3Q9NZ52 723 aa15.28■□□□□ 0.04
NSMCE1-202ENST00000561960 WTIPA6NIX2 430 aaPredicted RBP15.27■□□□□ 0.04
NSMCE1-202ENST00000561960 KIF4BQ2VIQ3 1234 aa15.27■□□□□ 0.04
NSMCE1-202ENST00000561960 MOB2Q70IA6 237 aa15.27■□□□□ 0.04
NSMCE1-202ENST00000561960 CDHR2Q9BYE9 1310 aa15.26■□□□□ 0.03
NSMCE1-202ENST00000561960 RGS19P49795 217 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms