RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 ATP6V1DQ9Y5K8 247 aa8.61□□□□□ -1.03
CDH1-203ENST00000561751 RNF17Q9BXT8 1623 aaKnown RBP8.61□□□□□ -1.03
CDH1-203ENST00000561751 PTPRCP08575 1304 aa8.6□□□□□ -1.03
CDH1-203ENST00000561751 WDR33Q9C0J8 1336 aaKnown RBP8.6□□□□□ -1.03
CDH1-203ENST00000561751 LOC102724159A0A0B4J2E5 919 aa8.6□□□□□ -1.03
CDH1-203ENST00000561751 PPEF1O14829 653 aaPredicted RBP8.6□□□□□ -1.03
CDH1-203ENST00000561751 OATP04181 439 aa8.6□□□□□ -1.03
CDH1-203ENST00000561751 UBE2HP62256 183 aa8.6□□□□□ -1.03
CDH1-203ENST00000561751 PWP2Q15269 919 aaKnown RBP8.6□□□□□ -1.03
CDH1-203ENST00000561751 TRAF7Q6Q0C0 670 aa8.6□□□□□ -1.03
CDH1-203ENST00000561751 ATF7IPQ6VMQ6 1270 aa8.6□□□□□ -1.03
CDH1-203ENST00000561751 FILIP1Q7Z7B0 1213 aa8.6□□□□□ -1.03
CDH1-203ENST00000561751 SRLQ86TD4 932 aa8.6□□□□□ -1.03
CDH1-203ENST00000561751 RNF214Q8ND24 703 aa8.6□□□□□ -1.03
CDH1-203ENST00000561751 PPM1EQ8WY54 764 aa8.6□□□□□ -1.03
CDH1-203ENST00000561751 JARID2Q92833 1246 aaPredicted RBP8.6□□□□□ -1.03
CDH1-203ENST00000561751 SRRTQ9BXP5 876 aaKnown RBP8.6□□□□□ -1.03
CDH1-203ENST00000561751 KCNF1Q9H3M0 494 aa8.6□□□□□ -1.03
CDH1-203ENST00000561751 L2HGDHQ9H9P8 463 aa8.6□□□□□ -1.03
CDH1-203ENST00000561751 MKRN1Q9UHC7 482 aaKnown RBP8.6□□□□□ -1.03
CDH1-203ENST00000561751 VWDEQ8N2E2 1590 aa8.6□□□□□ -1.03
CDH1-203ENST00000561751 ABCC11Q96J66 1382 aa8.6□□□□□ -1.03
CDH1-203ENST00000561751 GNPATO15228 680 aa8.59□□□□□ -1.03
CDH1-203ENST00000561751 ZRANB2O95218 330 aaKnown RBP eCLIP8.59□□□□□ -1.03
CDH1-203ENST00000561751 TUBB4BP68371 445 aa8.59□□□□□ -1.03
CDH1-203ENST00000561751 CEP135Q66GS9 1140 aa8.59□□□□□ -1.03
CDH1-203ENST00000561751 EGFL6Q8IUX8 553 aa8.59□□□□□ -1.03
CDH1-203ENST00000561751 POLKQ9UBT6 870 aa8.59□□□□□ -1.03
CDH1-203ENST00000561751 PYCARDQ9ULZ3 195 aa8.59□□□□□ -1.03
CDH1-203ENST00000561751 NUP155O75694 1391 aa8.59□□□□□ -1.03
CDH1-203ENST00000561751 PIK3R4Q99570 1358 aa8.59□□□□□ -1.03
CDH1-203ENST00000561751 PLEKHG2Q9H7P9 1386 aa8.59□□□□□ -1.03
CDH1-203ENST00000561751 MED14O60244 1454 aa8.58□□□□□ -1.04
CDH1-203ENST00000561751 MAST1Q9Y2H9 1570 aa8.58□□□□□ -1.04
CDH1-203ENST00000561751 NOS1P29475 1434 aa8.58□□□□□ -1.04
CDH1-203ENST00000561751 S1PR4O95977 384 aa8.58□□□□□ -1.04
CDH1-203ENST00000561751 CCDC192P0DO97 292 aa8.58□□□□□ -1.04
CDH1-203ENST00000561751 USP8P40818 1118 aa8.58□□□□□ -1.04
CDH1-203ENST00000561751 ZSCAN26Q16670 478 aa8.58□□□□□ -1.04
CDH1-203ENST00000561751 TTC31Q49AM3 519 aaPredicted RBP8.58□□□□□ -1.04
CDH1-203ENST00000561751 TRIM67Q6ZTA4 783 aa8.58□□□□□ -1.04
CDH1-203ENST00000561751 STAG1Q8WVM7 1258 aa8.58□□□□□ -1.04
CDH1-203ENST00000561751 A1CFQ9NQ94 594 aaKnown RBP8.58□□□□□ -1.04
CDH1-203ENST00000561751 FHOD1Q9Y613 1164 aa8.58□□□□□ -1.04
CDH1-203ENST00000561751 PPP1R12AO14974 1030 aaPredicted RBP8.57□□□□□ -1.04
CDH1-203ENST00000561751 SGSM2O43147 1006 aa8.57□□□□□ -1.04
CDH1-203ENST00000561751 ATP6V1AP38606 617 aa8.57□□□□□ -1.04
CDH1-203ENST00000561751 PUS10Q3MIT2 529 aaKnown RBP8.57□□□□□ -1.04
CDH1-203ENST00000561751 FBXO31Q5XUX0 539 aaPredicted RBP8.57□□□□□ -1.04
CDH1-203ENST00000561751 MCTP2Q6DN12 878 aa8.57□□□□□ -1.04
CDH1-203ENST00000561751 FBXO38Q6PIJ6 1188 aa8.57□□□□□ -1.04
CDH1-203ENST00000561751 AEBP1Q8IUX7 1158 aa8.57□□□□□ -1.04
CDH1-203ENST00000561751 FAM200AQ8TCP9 573 aa8.57□□□□□ -1.04
CDH1-203ENST00000561751 NLRP7Q8WX94 980 aa8.57□□□□□ -1.04
CDH1-203ENST00000561751 CXorf56Q9H5V9 222 aa8.57□□□□□ -1.04
CDH1-203ENST00000561751 ZNF446Q9NWS9 450 aa8.57□□□□□ -1.04
CDH1-203ENST00000561751 RTL1A6NKG5 1358 aa8.57□□□□□ -1.04
CDH1-203ENST00000561751 DUOX2Q9NRD8 1548 aa8.56□□□□□ -1.04
CDH1-203ENST00000561751 ERICH4A6NGS2 130 aa8.56□□□□□ -1.04
CDH1-203ENST00000561751 CCP110O43303 1012 aa8.56□□□□□ -1.04
CDH1-203ENST00000561751 ZNF853P0CG23 659 aa8.56□□□□□ -1.04
CDH1-203ENST00000561751 PNMA6AP0CW24 399 aaPredicted RBP8.56□□□□□ -1.04
CDH1-203ENST00000561751 ACTN2P35609 894 aa8.56□□□□□ -1.04
CDH1-203ENST00000561751 SLC19A1P41440 591 aa8.56□□□□□ -1.04
CDH1-203ENST00000561751 PLA2G4AP47712 749 aa8.56□□□□□ -1.04
CDH1-203ENST00000561751 PTPN14Q15678 1187 aa8.56□□□□□ -1.04
CDH1-203ENST00000561751 JAKMIP3Q5VZ66 844 aa8.56□□□□□ -1.04
CDH1-203ENST00000561751 SARM1Q6SZW1 724 aa8.56□□□□□ -1.04
CDH1-203ENST00000561751 SYT10Q6XYQ8 523 aa8.56□□□□□ -1.04
CDH1-203ENST00000561751 KRBA2Q6ZNG9 492 aa8.56□□□□□ -1.04
CDH1-203ENST00000561751 MMS22LQ6ZRQ5 1243 aa8.56□□□□□ -1.04
CDH1-203ENST00000561751 PHOX2BQ99453 314 aa8.56□□□□□ -1.04
CDH1-203ENST00000561751 NSFL1CQ9UNZ2 370 aaKnown RBP8.56□□□□□ -1.04
CDH1-203ENST00000561751 KDM2AQ9Y2K7 1162 aa8.56□□□□□ -1.04
CDH1-203ENST00000561751 AATKQ6ZMQ8 1374 aa8.56□□□□□ -1.04
CDH1-203ENST00000561751 DEPDC5O75140 1603 aa8.55□□□□□ -1.04
CDH1-203ENST00000561751 FAM177BA6PVY3 158 aa8.55□□□□□ -1.04
CDH1-203ENST00000561751 ADH1BP00325 375 aa8.55□□□□□ -1.04
CDH1-203ENST00000561751 TRIM27P14373 513 aa8.55□□□□□ -1.04
CDH1-203ENST00000561751 ERCC3P19447 782 aa8.55□□□□□ -1.04
CDH1-203ENST00000561751 TPD52L1Q16890 204 aaPredicted RBP8.55□□□□□ -1.04
CDH1-203ENST00000561751 CCDC93Q567U6 631 aa8.55□□□□□ -1.04
CDH1-203ENST00000561751 CT47A1Q5JQC4 288 aaPredicted RBP8.55□□□□□ -1.04
CDH1-203ENST00000561751 SMYD5Q6GMV2 418 aa8.55□□□□□ -1.04
CDH1-203ENST00000561751 ZSCAN25Q6NSZ9 544 aa8.55□□□□□ -1.04
CDH1-203ENST00000561751 TMCO3Q6UWJ1 677 aa8.55□□□□□ -1.04
CDH1-203ENST00000561751 LIAT1Q6ZQX7 453 aa8.55□□□□□ -1.04
CDH1-203ENST00000561751 USP48Q86UV5 1035 aa8.55□□□□□ -1.04
CDH1-203ENST00000561751 PLA2G4DQ86XP0 818 aa8.55□□□□□ -1.04
CDH1-203ENST00000561751 CERS3Q8IU89 383 aa8.55□□□□□ -1.04
CDH1-203ENST00000561751 SCUBE3Q8IX30 993 aa8.55□□□□□ -1.04
CDH1-203ENST00000561751 CNPY4Q8N129 248 aa8.55□□□□□ -1.04
CDH1-203ENST00000561751 ANKLE1Q8NAG6 615 aa8.55□□□□□ -1.04
CDH1-203ENST00000561751 KCNG1Q9UIX4 513 aa8.55□□□□□ -1.04
CDH1-203ENST00000561751 RRP15Q9Y3B9 282 aaKnown RBP8.55□□□□□ -1.04
CDH1-203ENST00000561751 LRRFIP2Q9Y608 721 aaKnown RBP8.55□□□□□ -1.04
CDH1-203ENST00000561751 TNRQ92752 1358 aa8.55□□□□□ -1.04
CDH1-203ENST00000561751 IQGAP1P46940 1657 aa8.55□□□□□ -1.04
CDH1-203ENST00000561751 SSH2Q76I76 1423 aa8.54□□□□□ -1.04
CDH1-203ENST00000561751 ADGRB2O60241 1585 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms