RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 TMC4Q7Z404 712 aa30.49■■■□□ 2.47
CDR2-202ENST00000561630 POTECB2RU33 542 aa30.48■■■□□ 2.47
CDR2-202ENST00000561630 FKBP5Q13451 457 aaPredicted RBP30.48■■■□□ 2.47
CDR2-202ENST00000561630 DDNO94850 711 aaPredicted RBP30.47■■■□□ 2.47
CDR2-202ENST00000561630 JDP2Q8WYK2 163 aa30.47■■■□□ 2.47
CDR2-202ENST00000561630 NEURL1BA8MQ27 555 aa30.46■■■□□ 2.47
CDR2-202ENST00000561630 FZD9O00144 591 aa30.46■■■□□ 2.47
CDR2-202ENST00000561630 CWF19L2Q2TBE0 894 aaKnown RBP30.46■■■□□ 2.47
CDR2-202ENST00000561630 JARID2Q92833 1246 aaPredicted RBP30.46■■■□□ 2.47
CDR2-202ENST00000561630 RTFDC1Q9BY42 306 aaPredicted RBP30.46■■■□□ 2.47
CDR2-202ENST00000561630 E9PSI1 815 aa30.45■■■□□ 2.47
CDR2-202ENST00000561630 HSPA6P17066 643 aa30.45■■■□□ 2.47
CDR2-202ENST00000561630 CELF1Q92879 486 aaKnown RBP30.45■■■□□ 2.47
CDR2-202ENST00000561630 CDHR2Q9BYE9 1310 aa30.45■■■□□ 2.46
CDR2-202ENST00000561630 PDE8AO60658 829 aa30.44■■■□□ 2.46
CDR2-202ENST00000561630 DNAAF4Q8WXU2 420 aa30.44■■■□□ 2.46
CDR2-202ENST00000561630 WDR90Q96KV7 1748 aa30.44■■■□□ 2.46
CDR2-202ENST00000561630 ZNF541Q9H0D2 1346 aa30.44■■■□□ 2.46
CDR2-202ENST00000561630 DPP8Q6V1X1 898 aaPredicted RBP30.43■■■□□ 2.46
CDR2-202ENST00000561630 LARGE2Q8N3Y3 721 aa30.43■■■□□ 2.46
CDR2-202ENST00000561630 MPNDQ8N594 471 aa30.43■■■□□ 2.46
CDR2-202ENST00000561630 SUPT20HQ8NEM7 779 aa30.43■■■□□ 2.46
CDR2-202ENST00000561630 VPS33BQ9H267 617 aa30.43■■■□□ 2.46
CDR2-202ENST00000561630 FSTL1Q12841 308 aa30.42■■■□□ 2.46
CDR2-202ENST00000561630 CCDC152Q4G0S7 254 aa30.42■■■□□ 2.46
CDR2-202ENST00000561630 L3MBTL3Q96JM7 780 aaPredicted RBP30.42■■■□□ 2.46
CDR2-202ENST00000561630 RPS8P62241 208 aaKnown RBP30.41■■■□□ 2.46
CDR2-202ENST00000561630 SLFN5Q08AF3 891 aa30.41■■■□□ 2.46
CDR2-202ENST00000561630 COL4A5P29400 1685 aa30.4■■■□□ 2.46
CDR2-202ENST00000561630 H7C1W4 665 aa30.4■■■□□ 2.46
CDR2-202ENST00000561630 LINS1Q8NG48 757 aa30.4■■■□□ 2.46
CDR2-202ENST00000561630 PPIP5K2O43314 1243 aa30.39■■■□□ 2.46
CDR2-202ENST00000561630 GCKRQ14397 625 aa30.39■■■□□ 2.46
CDR2-202ENST00000561630 SEC31BQ9NQW1 1179 aa30.39■■■□□ 2.46
CDR2-202ENST00000561630 AOC3Q16853 763 aa30.38■■■□□ 2.45
CDR2-202ENST00000561630 DIEXFQ68CQ4 756 aaKnown RBP30.38■■■□□ 2.45
CDR2-202ENST00000561630 SMC1BQ8NDV3 1235 aa30.38■■■□□ 2.45
CDR2-202ENST00000561630 IQCA1LA6NCM1 817 aa30.37■■■□□ 2.45
CDR2-202ENST00000561630 CTSWP56202 376 aa30.37■■■□□ 2.45
CDR2-202ENST00000561630 EIF6P56537 245 aaKnown RBP30.37■■■□□ 2.45
CDR2-202ENST00000561630 UBE3BQ7Z3V4 1068 aa30.37■■■□□ 2.45
CDR2-202ENST00000561630 NIM1KQ8IY84 436 aa30.37■■■□□ 2.45
CDR2-202ENST00000561630 GPC2Q8N158 579 aa30.37■■■□□ 2.45
CDR2-202ENST00000561630 COL4A1P02462 1669 aa30.36■■■□□ 2.45
CDR2-202ENST00000561630 CACNA1FO60840 1977 aa30.35■■■□□ 2.45
CDR2-202ENST00000561630 F6X3S4 739 aa30.35■■■□□ 2.45
CDR2-202ENST00000561630 KIAA2012Q0VF49 1180 aa30.35■■■□□ 2.45
CDR2-202ENST00000561630 CDCA7LQ96GN5 454 aa30.35■■■□□ 2.45
CDR2-202ENST00000561630 CCDC85AQ96PX6 553 aaPredicted RBP30.35■■■□□ 2.45
CDR2-202ENST00000561630 TAF1P21675 1872 aa30.35■■■□□ 2.45
CDR2-202ENST00000561630 LRRC37AA6NMS7 1700 aa30.34■■■□□ 2.45
CDR2-202ENST00000561630 BEND3Q5T5X7 828 aa30.34■■■□□ 2.45
CDR2-202ENST00000561630 TTLL11Q8NHH1 800 aa30.34■■■□□ 2.45
CDR2-202ENST00000561630 NSFL1CQ9UNZ2 370 aaKnown RBP30.34■■■□□ 2.45
CDR2-202ENST00000561630 CASP7P55210 303 aa30.32■■■□□ 2.44
CDR2-202ENST00000561630 GPSM2P81274 684 aa30.32■■■□□ 2.44
CDR2-202ENST00000561630 TRMT2AQ8IZ69 625 aaKnown RBP30.32■■■□□ 2.44
CDR2-202ENST00000561630 MIER1Q8N108 512 aa30.32■■■□□ 2.44
CDR2-202ENST00000561630 PLA2G12BQ9BX93 195 aa30.32■■■□□ 2.44
CDR2-202ENST00000561630 TAF1DQ9H5J8 278 aaPredicted RBP30.32■■■□□ 2.44
CDR2-202ENST00000561630 ZNRF3Q9ULT6 936 aa30.32■■■□□ 2.44
CDR2-202ENST00000561630 APLP1P51693 650 aa30.31■■■□□ 2.44
CDR2-202ENST00000561630 DUOX1Q9NRD9 1551 aa30.31■■■□□ 2.44
CDR2-202ENST00000561630 RTL9Q8NET4 1388 aa30.3■■■□□ 2.44
CDR2-202ENST00000561630 HACL1Q9UJ83 578 aa30.3■■■□□ 2.44
CDR2-202ENST00000561630 GJA3Q9Y6H8 435 aa30.3■■■□□ 2.44
CDR2-202ENST00000561630 ANKRD18AQ8IVF6 992 aa30.29■■■□□ 2.44
CDR2-202ENST00000561630 MRPL50Q8N5N7 158 aaKnown RBP30.29■■■□□ 2.44
CDR2-202ENST00000561630 CDC5LQ99459 802 aaKnown RBP30.29■■■□□ 2.44
CDR2-202ENST00000561630 GREM2Q9H772 168 aa30.29■■■□□ 2.44
CDR2-202ENST00000561630 PODXL2Q9NZ53 605 aa30.29■■■□□ 2.44
CDR2-202ENST00000561630 POLLQ9UGP5 575 aa30.29■■■□□ 2.44
CDR2-202ENST00000561630 WASHC4Q2M389 1173 aa30.28■■■□□ 2.44
CDR2-202ENST00000561630 POTEIP0CG38 1075 aa30.27■■■□□ 2.44
CDR2-202ENST00000561630 POTEJP0CG39 1038 aa30.27■■■□□ 2.44
CDR2-202ENST00000561630 TBC1D16Q8TBP0 767 aa30.27■■■□□ 2.44
CDR2-202ENST00000561630 C6orf229H3BNL8 230 aa30.26■■■□□ 2.43
CDR2-202ENST00000561630 EPHX2P34913 555 aa30.26■■■□□ 2.43
CDR2-202ENST00000561630 CXCL9Q07325 125 aa30.26■■■□□ 2.43
CDR2-202ENST00000561630 SSH1Q8WYL5 1049 aa30.26■■■□□ 2.43
CDR2-202ENST00000561630 SCN4AP35499 1836 aa30.25■■■□□ 2.43
CDR2-202ENST00000561630 CSF1RP07333 972 aa30.25■■■□□ 2.43
CDR2-202ENST00000561630 CHADLQ6NUI6 762 aa30.25■■■□□ 2.43
CDR2-202ENST00000561630 ANKIB1Q9P2G1 1089 aa30.25■■■□□ 2.43
CDR2-202ENST00000561630 ALDH1L1O75891 902 aa30.24■■■□□ 2.43
CDR2-202ENST00000561630 LDHDQ86WU2 507 aa30.24■■■□□ 2.43
CDR2-202ENST00000561630 EYA3Q99504 573 aa30.24■■■□□ 2.43
CDR2-202ENST00000561630 BSDC1Q9NW68 430 aaPredicted RBP30.24■■■□□ 2.43
CDR2-202ENST00000561630 SCNN1DP51172 638 aa30.23■■■□□ 2.43
CDR2-202ENST00000561630 SLC4A10Q6U841 1118 aa30.23■■■□□ 2.43
CDR2-202ENST00000561630 PTPRCP08575 1304 aa30.22■■■□□ 2.43
CDR2-202ENST00000561630 LTBP1Q14766 1721 aa30.22■■■□□ 2.43
CDR2-202ENST00000561630 GRM8O00222 908 aa30.22■■■□□ 2.43
CDR2-202ENST00000561630 LMOD1P29536 600 aaPredicted RBP30.22■■■□□ 2.43
CDR2-202ENST00000561630 ALDH1L2Q3SY69 923 aa30.22■■■□□ 2.43
CDR2-202ENST00000561630 CIAPIN1Q6FI81 312 aa30.22■■■□□ 2.43
CDR2-202ENST00000561630 PNMA8AQ86V59 439 aaPredicted RBP30.22■■■□□ 2.43
CDR2-202ENST00000561630 SRCIN1Q9C0H9 1055 aa30.22■■■□□ 2.43
CDR2-202ENST00000561630 GGA1Q9UJY5 639 aa30.22■■■□□ 2.43
CDR2-202ENST00000561630 YDJCA8MPS7 323 aa30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms