RNA–Protein interactions for RNA: ENST00000561610.1

PPP4C-202, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4C, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-202ENST00000561610 RBM46Q8TBY0 533 aaKnown RBP23.58■■□□□ 1.36
PPP4C-202ENST00000561610 CCDC85AQ96PX6 553 aaPredicted RBP23.58■■□□□ 1.36
PPP4C-202ENST00000561610 PDE8AO60658 829 aa23.57■■□□□ 1.36
PPP4C-202ENST00000561610 BRPF1P55201 1214 aaPredicted RBP23.57■■□□□ 1.36
PPP4C-202ENST00000561610 PRPF40BQ6NWY9 871 aaKnown RBP23.57■■□□□ 1.36
PPP4C-202ENST00000561610 LAMB2P55268 1798 aa23.56■■□□□ 1.36
PPP4C-202ENST00000561610 C21orf2O43822 256 aa23.56■■□□□ 1.36
PPP4C-202ENST00000561610 CRY2Q49AN0 593 aa23.56■■□□□ 1.36
PPP4C-202ENST00000561610 ZKSCAN2Q63HK3 967 aa23.56■■□□□ 1.36
PPP4C-202ENST00000561610 CLUAP1Q96AJ1 413 aa23.56■■□□□ 1.36
PPP4C-202ENST00000561610 CDHR2Q9BYE9 1310 aa23.56■■□□□ 1.36
PPP4C-202ENST00000561610 H7C1W4 665 aa23.55■■□□□ 1.36
PPP4C-202ENST00000561610 RCAN3Q9UKA8 241 aa23.55■■□□□ 1.36
PPP4C-202ENST00000561610 GRM8O00222 908 aa23.54■■□□□ 1.36
PPP4C-202ENST00000561610 CCT4P50991 539 aaKnown RBP23.54■■□□□ 1.36
PPP4C-202ENST00000561610 ARHGAP45Q92619 1136 aa23.54■■□□□ 1.36
PPP4C-202ENST00000561610 TMX4Q9H1E5 349 aaPredicted RBP23.54■■□□□ 1.36
PPP4C-202ENST00000561610 CCDC152Q4G0S7 254 aa23.53■■□□□ 1.36
PPP4C-202ENST00000561610 ATF7IPQ6VMQ6 1270 aa23.53■■□□□ 1.36
PPP4C-202ENST00000561610 FTSJ3Q8IY81 847 aaKnown RBP23.53■■□□□ 1.36
PPP4C-202ENST00000561610 CHMP3Q9Y3E7 222 aa23.53■■□□□ 1.36
PPP4C-202ENST00000561610 SLX4Q8IY92 1834 aa23.52■■□□□ 1.36
PPP4C-202ENST00000561610 ARFGEF1Q9Y6D6 1849 aa23.52■■□□□ 1.36
PPP4C-202ENST00000561610 ABCC4O15439 1325 aa23.52■■□□□ 1.36
PPP4C-202ENST00000561610 PPEF1O14829 653 aaPredicted RBP23.52■■□□□ 1.36
PPP4C-202ENST00000561610 CRAMP1Q96RY5 1269 aa23.52■■□□□ 1.36
PPP4C-202ENST00000561610 TNNQ9UQP3 1299 aa23.52■■□□□ 1.36
PPP4C-202ENST00000561610 TRIM27P14373 513 aa23.51■■□□□ 1.35
PPP4C-202ENST00000561610 HOXA10P31260 410 aaPredicted RBP23.51■■□□□ 1.35
PPP4C-202ENST00000561610 CTSWP56202 376 aa23.51■■□□□ 1.35
PPP4C-202ENST00000561610 SF3B3Q15393 1217 aaKnown RBP23.51■■□□□ 1.35
PPP4C-202ENST00000561610 FSTL1Q12841 308 aa23.5■■□□□ 1.35
PPP4C-202ENST00000561610 MYH3P11055 1940 aa23.49■■□□□ 1.35
PPP4C-202ENST00000561610 HSPA1AP0DMV8 641 aaKnown RBP23.48■■□□□ 1.35
PPP4C-202ENST00000561610 HSPA1BP0DMV9 641 aaKnown RBP23.48■■□□□ 1.35
PPP4C-202ENST00000561610 CASP7P55210 303 aa23.48■■□□□ 1.35
PPP4C-202ENST00000561610 GRAPQ13588 217 aa23.48■■□□□ 1.35
PPP4C-202ENST00000561610 CCDC93Q567U6 631 aa23.48■■□□□ 1.35
PPP4C-202ENST00000561610 SOGA3Q5TF21 947 aa23.48■■□□□ 1.35
PPP4C-202ENST00000561610 GRAPLQ8TC17 118 aaPredicted RBP23.48■■□□□ 1.35
PPP4C-202ENST00000561610 SEC31BQ9NQW1 1179 aa23.48■■□□□ 1.35
PPP4C-202ENST00000561610 TAF1P21675 1872 aa23.48■■□□□ 1.35
PPP4C-202ENST00000561610 NBPF7P0C2Y1 421 aaPredicted RBP23.47■■□□□ 1.35
PPP4C-202ENST00000561610 RASSF7Q02833 373 aa23.47■■□□□ 1.35
PPP4C-202ENST00000561610 OLFM4Q6UX06 510 aa23.47■■□□□ 1.35
PPP4C-202ENST00000561610 C9orf131Q5VYM1 1079 aa23.46■■□□□ 1.35
PPP4C-202ENST00000561610 TTLL11Q8NHH1 800 aa23.46■■□□□ 1.35
PPP4C-202ENST00000561610 CELF1Q92879 486 aaKnown RBP23.46■■□□□ 1.35
PPP4C-202ENST00000561610 SUCLG2Q96I99 432 aa23.46■■□□□ 1.35
PPP4C-202ENST00000561610 GREM2Q9H772 168 aa23.46■■□□□ 1.35
PPP4C-202ENST00000561610 BBOX1O75936 387 aa23.45■■□□□ 1.34
PPP4C-202ENST00000561610 DZIP1LQ8IYY4 767 aaKnown RBP23.45■■□□□ 1.34
PPP4C-202ENST00000561610 PLA2G12BQ9BX93 195 aa23.45■■□□□ 1.34
PPP4C-202ENST00000561610 PLIN1O60240 522 aa23.44■■□□□ 1.34
PPP4C-202ENST00000561610 UBTFL1P0CB47 393 aaPredicted RBP23.44■■□□□ 1.34
PPP4C-202ENST00000561610 ANKRD18AQ8IVF6 992 aa23.44■■□□□ 1.34
PPP4C-202ENST00000561610 TMEM57Q8N5G2 664 aa23.44■■□□□ 1.34
PPP4C-202ENST00000561610 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.44■■□□□ 1.34
PPP4C-202ENST00000561610 CDC5LQ99459 802 aaKnown RBP23.44■■□□□ 1.34
PPP4C-202ENST00000561610 RPS8P62241 208 aaKnown RBP23.43■■□□□ 1.34
PPP4C-202ENST00000561610 FAM161AQ3B820 660 aa23.43■■□□□ 1.34
PPP4C-202ENST00000561610 TAF7LQ5H9L4 462 aa23.43■■□□□ 1.34
PPP4C-202ENST00000561610 INTS3Q68E01 1043 aaKnown RBP23.43■■□□□ 1.34
PPP4C-202ENST00000561610 LMBR1LQ6UX01 489 aa23.43■■□□□ 1.34
PPP4C-202ENST00000561610 ITPRIPQ8IWB1 547 aa23.43■■□□□ 1.34
PPP4C-202ENST00000561610 USP44Q9H0E7 712 aa23.43■■□□□ 1.34
PPP4C-202ENST00000561610 KDM2BQ8NHM5 1336 aa23.43■■□□□ 1.34
PPP4C-202ENST00000561610 ITGA6P23229 1130 aa23.42■■□□□ 1.34
PPP4C-202ENST00000561610 FOXO4P98177 505 aa23.42■■□□□ 1.34
PPP4C-202ENST00000561610 EPHA10Q5JZY3 1008 aa23.42■■□□□ 1.34
PPP4C-202ENST00000561610 RTKN2Q8IZC4 609 aa23.42■■□□□ 1.34
PPP4C-202ENST00000561610 TAOK3Q9H2K8 898 aa23.42■■□□□ 1.34
PPP4C-202ENST00000561610 ATP6V0A2Q9Y487 856 aa23.42■■□□□ 1.34
PPP4C-202ENST00000561610 ANKRD18BA2A2Z9 1011 aa23.41■■□□□ 1.34
PPP4C-202ENST00000561610 MS4A1P11836 297 aa23.41■■□□□ 1.34
PPP4C-202ENST00000561610 IGHMBP2P38935 993 aaKnown RBP23.41■■□□□ 1.34
PPP4C-202ENST00000561610 CC2D2BQ6DHV5 1058 aa23.41■■□□□ 1.34
PPP4C-202ENST00000561610 SLC51AQ86UW1 340 aa23.41■■□□□ 1.34
PPP4C-202ENST00000561610 BICC1Q9H694 974 aaKnown RBP23.41■■□□□ 1.34
PPP4C-202ENST00000561610 UTYO14607 1347 aa23.41■■□□□ 1.34
PPP4C-202ENST00000561610 IFIT5Q13325 482 aaKnown RBP23.4■■□□□ 1.34
PPP4C-202ENST00000561610 CCDC57Q2TAC2 916 aa23.4■■□□□ 1.34
PPP4C-202ENST00000561610 PANK1Q8TE04 598 aa23.4■■□□□ 1.34
PPP4C-202ENST00000561610 C7orf43Q8WVR3 580 aa23.4■■□□□ 1.34
PPP4C-202ENST00000561610 MEIS3Q99687 375 aa23.4■■□□□ 1.34
PPP4C-202ENST00000561610 RRAGCQ9HB90 399 aa23.4■■□□□ 1.34
PPP4C-202ENST00000561610 RNF181Q9P0P0 153 aa23.4■■□□□ 1.34
PPP4C-202ENST00000561610 SPEF2Q9C093 1822 aa23.39■■□□□ 1.34
PPP4C-202ENST00000561610 TMC4Q7Z404 712 aa23.39■■□□□ 1.34
PPP4C-202ENST00000561610 SP8Q8IXZ3 490 aa23.39■■□□□ 1.34
PPP4C-202ENST00000561610 SMC1BQ8NDV3 1235 aa23.39■■□□□ 1.34
PPP4C-202ENST00000561610 MPHOSPH8Q99549 860 aa23.39■■□□□ 1.34
PPP4C-202ENST00000561610 HDAC5Q9UQL6 1122 aa23.39■■□□□ 1.34
PPP4C-202ENST00000561610 NFKBIEO00221 500 aa23.38■■□□□ 1.33
PPP4C-202ENST00000561610 CSF1RP07333 972 aa23.38■■□□□ 1.33
PPP4C-202ENST00000561610 GNAI3P08754 354 aa23.38■■□□□ 1.33
PPP4C-202ENST00000561610 DPP8Q6V1X1 898 aaPredicted RBP23.38■■□□□ 1.33
PPP4C-202ENST00000561610 SLC34A2O95436 690 aa23.37■■□□□ 1.33
PPP4C-202ENST00000561610 RLBP1P12271 317 aa23.37■■□□□ 1.33
PPP4C-202ENST00000561610 FKBP4Q02790 459 aaKnown RBP eCLIP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms