RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 CDHR2Q9BYE9 1310 aa19.8■□□□□ 0.76
CCDC113-203ENST00000561517 E9PSI1 815 aa19.8■□□□□ 0.76
CCDC113-203ENST00000561517 FKBP5Q13451 457 aaPredicted RBP19.8■□□□□ 0.76
CCDC113-203ENST00000561517 TMC4Q7Z404 712 aa19.8■□□□□ 0.76
CCDC113-203ENST00000561517 TMX4Q9H1E5 349 aaPredicted RBP19.8■□□□□ 0.76
CCDC113-203ENST00000561517 COL4A1P02462 1669 aa19.79■□□□□ 0.76
CCDC113-203ENST00000561517 NEURL1BA8MQ27 555 aa19.79■□□□□ 0.76
CCDC113-203ENST00000561517 POTECB2RU33 542 aa19.79■□□□□ 0.76
CCDC113-203ENST00000561517 PDE8AO60658 829 aa19.79■□□□□ 0.76
CCDC113-203ENST00000561517 VEGFAP15692 232 aaPredicted RBP19.79■□□□□ 0.76
CCDC113-203ENST00000561517 RBM46Q8TBY0 533 aaKnown RBP19.79■□□□□ 0.76
CCDC113-203ENST00000561517 DNAAF4Q8WXU2 420 aa19.79■□□□□ 0.76
CCDC113-203ENST00000561517 COL4A5P29400 1685 aa19.78■□□□□ 0.76
CCDC113-203ENST00000561517 FZD9O00144 591 aa19.78■□□□□ 0.76
CCDC113-203ENST00000561517 SLFN5Q08AF3 891 aa19.78■□□□□ 0.76
CCDC113-203ENST00000561517 CWF19L2Q2TBE0 894 aaKnown RBP19.78■□□□□ 0.76
CCDC113-203ENST00000561517 DIEXFQ68CQ4 756 aaKnown RBP19.78■□□□□ 0.76
CCDC113-203ENST00000561517 JARID2Q92833 1246 aaPredicted RBP19.78■□□□□ 0.76
CCDC113-203ENST00000561517 CELF1Q92879 486 aaKnown RBP19.78■□□□□ 0.76
CCDC113-203ENST00000561517 RTFDC1Q9BY42 306 aaPredicted RBP19.78■□□□□ 0.76
CCDC113-203ENST00000561517 SCN4AP35499 1836 aa19.78■□□□□ 0.76
CCDC113-203ENST00000561517 DDNO94850 711 aaPredicted RBP19.77■□□□□ 0.76
CCDC113-203ENST00000561517 C16orf71Q8IYS4 520 aaPredicted RBP19.77■□□□□ 0.76
CCDC113-203ENST00000561517 VPS33BQ9H267 617 aa19.77■□□□□ 0.76
CCDC113-203ENST00000561517 MPNDQ8N594 471 aa19.76■□□□□ 0.75
CCDC113-203ENST00000561517 LINS1Q8NG48 757 aa19.76■□□□□ 0.75
CCDC113-203ENST00000561517 JDP2Q8WYK2 163 aa19.76■□□□□ 0.75
CCDC113-203ENST00000561517 ZNF541Q9H0D2 1346 aa19.76■□□□□ 0.75
CCDC113-203ENST00000561517 H7C1W4 665 aa19.75■□□□□ 0.75
CCDC113-203ENST00000561517 RPS8P62241 208 aaKnown RBP19.75■□□□□ 0.75
CCDC113-203ENST00000561517 GCKRQ14397 625 aa19.75■□□□□ 0.75
CCDC113-203ENST00000561517 CCDC152Q4G0S7 254 aa19.75■□□□□ 0.75
CCDC113-203ENST00000561517 DPP8Q6V1X1 898 aaPredicted RBP19.75■□□□□ 0.75
CCDC113-203ENST00000561517 LARGE2Q8N3Y3 721 aa19.75■□□□□ 0.75
CCDC113-203ENST00000561517 SUPT20HQ8NEM7 779 aa19.75■□□□□ 0.75
CCDC113-203ENST00000561517 L3MBTL3Q96JM7 780 aaPredicted RBP19.75■□□□□ 0.75
CCDC113-203ENST00000561517 DUOX1Q9NRD9 1551 aa19.74■□□□□ 0.75
CCDC113-203ENST00000561517 LTBP1Q14766 1721 aa19.74■□□□□ 0.75
CCDC113-203ENST00000561517 HSPA6P17066 643 aa19.74■□□□□ 0.75
CCDC113-203ENST00000561517 TRMT2AQ8IZ69 625 aaKnown RBP19.74■□□□□ 0.75
CCDC113-203ENST00000561517 MIER1Q8N108 512 aa19.74■□□□□ 0.75
CCDC113-203ENST00000561517 SEC31BQ9NQW1 1179 aa19.74■□□□□ 0.75
CCDC113-203ENST00000561517 CTSWP56202 376 aa19.73■□□□□ 0.75
CCDC113-203ENST00000561517 FSTL1Q12841 308 aa19.73■□□□□ 0.75
CCDC113-203ENST00000561517 CDCA7LQ96GN5 454 aa19.73■□□□□ 0.75
CCDC113-203ENST00000561517 F6X3S4 739 aa19.72■□□□□ 0.75
CCDC113-203ENST00000561517 PPIP5K2O43314 1243 aa19.72■□□□□ 0.75
CCDC113-203ENST00000561517 CASP7P55210 303 aa19.72■□□□□ 0.75
CCDC113-203ENST00000561517 AOC3Q16853 763 aa19.72■□□□□ 0.75
CCDC113-203ENST00000561517 BEND3Q5T5X7 828 aa19.72■□□□□ 0.75
CCDC113-203ENST00000561517 UBE3BQ7Z3V4 1068 aa19.72■□□□□ 0.75
CCDC113-203ENST00000561517 TTLL11Q8NHH1 800 aa19.72■□□□□ 0.75
CCDC113-203ENST00000561517 PLA2G12BQ9BX93 195 aa19.72■□□□□ 0.75
CCDC113-203ENST00000561517 EIF6P56537 245 aaKnown RBP19.71■□□□□ 0.75
CCDC113-203ENST00000561517 KIAA2012Q0VF49 1180 aa19.71■□□□□ 0.75
CCDC113-203ENST00000561517 NIM1KQ8IY84 436 aa19.71■□□□□ 0.75
CCDC113-203ENST00000561517 RTL9Q8NET4 1388 aa19.7■□□□□ 0.74
CCDC113-203ENST00000561517 SPEF2Q9C093 1822 aa19.7■□□□□ 0.74
CCDC113-203ENST00000561517 GPC2Q8N158 579 aa19.7■□□□□ 0.74
CCDC113-203ENST00000561517 MRPL50Q8N5N7 158 aaKnown RBP19.7■□□□□ 0.74
CCDC113-203ENST00000561517 SMC1BQ8NDV3 1235 aa19.7■□□□□ 0.74
CCDC113-203ENST00000561517 IQCA1LA6NCM1 817 aa19.69■□□□□ 0.74
CCDC113-203ENST00000561517 GPSM2P81274 684 aa19.69■□□□□ 0.74
CCDC113-203ENST00000561517 CCDC85AQ96PX6 553 aaPredicted RBP19.69■□□□□ 0.74
CCDC113-203ENST00000561517 NSFL1CQ9UNZ2 370 aaKnown RBP19.69■□□□□ 0.74
CCDC113-203ENST00000561517 PODXL2Q9NZ53 605 aa19.68■□□□□ 0.74
CCDC113-203ENST00000561517 ANKRD18AQ8IVF6 992 aa19.67■□□□□ 0.74
CCDC113-203ENST00000561517 SSH1Q8WYL5 1049 aa19.67■□□□□ 0.74
CCDC113-203ENST00000561517 CDC5LQ99459 802 aaKnown RBP19.67■□□□□ 0.74
CCDC113-203ENST00000561517 TAF1DQ9H5J8 278 aaPredicted RBP19.67■□□□□ 0.74
CCDC113-203ENST00000561517 GREM2Q9H772 168 aa19.67■□□□□ 0.74
CCDC113-203ENST00000561517 POLLQ9UGP5 575 aa19.67■□□□□ 0.74
CCDC113-203ENST00000561517 ZNRF3Q9ULT6 936 aa19.67■□□□□ 0.74
CCDC113-203ENST00000561517 ALDH1L1O75891 902 aa19.66■□□□□ 0.74
CCDC113-203ENST00000561517 CSF1RP07333 972 aa19.66■□□□□ 0.74
CCDC113-203ENST00000561517 CT47B1P0C2W7 299 aaPredicted RBP19.66■□□□□ 0.74
CCDC113-203ENST00000561517 ALDH1L2Q3SY69 923 aa19.66■□□□□ 0.74
CCDC113-203ENST00000561517 HACL1Q9UJ83 578 aa19.66■□□□□ 0.74
CCDC113-203ENST00000561517 APLP1P51693 650 aa19.65■□□□□ 0.74
CCDC113-203ENST00000561517 WASHC4Q2M389 1173 aa19.65■□□□□ 0.74
CCDC113-203ENST00000561517 TBC1D16Q8TBP0 767 aa19.65■□□□□ 0.74
CCDC113-203ENST00000561517 PTPRCP08575 1304 aa19.65■□□□□ 0.74
CCDC113-203ENST00000561517 ADAMTSL1Q8N6G6 1762 aa19.65■□□□□ 0.74
CCDC113-203ENST00000561517 C6orf229H3BNL8 230 aa19.64■□□□□ 0.73
CCDC113-203ENST00000561517 CXCL9Q07325 125 aa19.64■□□□□ 0.73
CCDC113-203ENST00000561517 EYA3Q99504 573 aa19.64■□□□□ 0.73
CCDC113-203ENST00000561517 SRCIN1Q9C0H9 1055 aa19.64■□□□□ 0.73
CCDC113-203ENST00000561517 BSDC1Q9NW68 430 aaPredicted RBP19.64■□□□□ 0.73
CCDC113-203ENST00000561517 GJA3Q9Y6H8 435 aa19.64■□□□□ 0.73
CCDC113-203ENST00000561517 GRM8O00222 908 aa19.63■□□□□ 0.73
CCDC113-203ENST00000561517 POTEIP0CG38 1075 aa19.63■□□□□ 0.73
CCDC113-203ENST00000561517 POTEJP0CG39 1038 aa19.63■□□□□ 0.73
CCDC113-203ENST00000561517 EPHX2P34913 555 aa19.63■□□□□ 0.73
CCDC113-203ENST00000561517 SLC4A10Q6U841 1118 aa19.63■□□□□ 0.73
CCDC113-203ENST00000561517 ANKIB1Q9P2G1 1089 aa19.63■□□□□ 0.73
CCDC113-203ENST00000561517 SCN9AQ15858 1988 aa19.63■□□□□ 0.73
CCDC113-203ENST00000561517 XDHP47989 1333 aa19.62■□□□□ 0.73
CCDC113-203ENST00000561517 YDJCA8MPS7 323 aa19.62■□□□□ 0.73
CCDC113-203ENST00000561517 ITGA6P23229 1130 aa19.62■□□□□ 0.73
CCDC113-203ENST00000561517 SCNN1DP51172 638 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms