RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 HSP90B1P14625 803 aaKnown RBP26.48■■□□□ 1.83
TPM1-232ENST00000561425 RTL5Q5HYW3 569 aaPredicted RBP26.48■■□□□ 1.83
TPM1-232ENST00000561425 CDHR2Q9BYE9 1310 aa26.47■■□□□ 1.83
TPM1-232ENST00000561425 NEURL1BA8MQ27 555 aa26.46■■□□□ 1.83
TPM1-232ENST00000561425 DDNO94850 711 aaPredicted RBP26.46■■□□□ 1.83
TPM1-232ENST00000561425 HSPA6P17066 643 aa26.46■■□□□ 1.83
TPM1-232ENST00000561425 L3MBTL3Q96JM7 780 aaPredicted RBP26.46■■□□□ 1.83
TPM1-232ENST00000561425 PDE8AO60658 829 aa26.45■■□□□ 1.82
TPM1-232ENST00000561425 CELF1Q92879 486 aaKnown RBP26.45■■□□□ 1.82
TPM1-232ENST00000561425 NEXNQ0ZGT2 675 aa26.44■■□□□ 1.82
TPM1-232ENST00000561425 FSTL1Q12841 308 aa26.44■■□□□ 1.82
TPM1-232ENST00000561425 TMX4Q9H1E5 349 aaPredicted RBP26.44■■□□□ 1.82
TPM1-232ENST00000561425 COL4A5P29400 1685 aa26.44■■□□□ 1.82
TPM1-232ENST00000561425 H7C1W4 665 aa26.43■■□□□ 1.82
TPM1-232ENST00000561425 CWF19L2Q2TBE0 894 aaKnown RBP26.43■■□□□ 1.82
TPM1-232ENST00000561425 C16orf71Q8IYS4 520 aaPredicted RBP26.43■■□□□ 1.82
TPM1-232ENST00000561425 DNAAF4Q8WXU2 420 aa26.43■■□□□ 1.82
TPM1-232ENST00000561425 ZNF541Q9H0D2 1346 aa26.42■■□□□ 1.82
TPM1-232ENST00000561425 CACNA1FO60840 1977 aa26.42■■□□□ 1.82
TPM1-232ENST00000561425 E9PSI1 815 aa26.42■■□□□ 1.82
TPM1-232ENST00000561425 SLFN5Q08AF3 891 aa26.42■■□□□ 1.82
TPM1-232ENST00000561425 FKBP5Q13451 457 aaPredicted RBP26.42■■□□□ 1.82
TPM1-232ENST00000561425 TRMT2AQ8IZ69 625 aaKnown RBP26.42■■□□□ 1.82
TPM1-232ENST00000561425 MPNDQ8N594 471 aa26.42■■□□□ 1.82
TPM1-232ENST00000561425 SUPT20HQ8NEM7 779 aa26.42■■□□□ 1.82
TPM1-232ENST00000561425 JDP2Q8WYK2 163 aa26.42■■□□□ 1.82
TPM1-232ENST00000561425 JARID2Q92833 1246 aaPredicted RBP26.42■■□□□ 1.82
TPM1-232ENST00000561425 RPS8P62241 208 aaKnown RBP26.41■■□□□ 1.82
TPM1-232ENST00000561425 LINS1Q8NG48 757 aa26.41■■□□□ 1.82
TPM1-232ENST00000561425 CASP7P55210 303 aa26.4■■□□□ 1.82
TPM1-232ENST00000561425 GCKRQ14397 625 aa26.4■■□□□ 1.82
TPM1-232ENST00000561425 DPP8Q6V1X1 898 aaPredicted RBP26.4■■□□□ 1.82
TPM1-232ENST00000561425 COL4A1P02462 1669 aa26.4■■□□□ 1.82
TPM1-232ENST00000561425 CCDC152Q4G0S7 254 aa26.39■■□□□ 1.82
TPM1-232ENST00000561425 LARGE2Q8N3Y3 721 aa26.39■■□□□ 1.82
TPM1-232ENST00000561425 SEC31BQ9NQW1 1179 aa26.39■■□□□ 1.82
TPM1-232ENST00000561425 KIAA2012Q0VF49 1180 aa26.38■■□□□ 1.81
TPM1-232ENST00000561425 GPC2Q8N158 579 aa26.38■■□□□ 1.81
TPM1-232ENST00000561425 SMC1BQ8NDV3 1235 aa26.38■■□□□ 1.81
TPM1-232ENST00000561425 PLA2G12BQ9BX93 195 aa26.38■■□□□ 1.81
TPM1-232ENST00000561425 LRRC37AA6NMS7 1700 aa26.38■■□□□ 1.81
TPM1-232ENST00000561425 TAF1P21675 1872 aa26.38■■□□□ 1.81
TPM1-232ENST00000561425 TTLL11Q8NHH1 800 aa26.37■■□□□ 1.81
TPM1-232ENST00000561425 PPIP5K2O43314 1243 aa26.36■■□□□ 1.81
TPM1-232ENST00000561425 CTSWP56202 376 aa26.36■■□□□ 1.81
TPM1-232ENST00000561425 AOC3Q16853 763 aa26.36■■□□□ 1.81
TPM1-232ENST00000561425 BEND3Q5T5X7 828 aa26.36■■□□□ 1.81
TPM1-232ENST00000561425 RTL9Q8NET4 1388 aa26.35■■□□□ 1.81
TPM1-232ENST00000561425 IQCA1LA6NCM1 817 aa26.35■■□□□ 1.81
TPM1-232ENST00000561425 CDCA7LQ96GN5 454 aa26.35■■□□□ 1.81
TPM1-232ENST00000561425 DUOX1Q9NRD9 1551 aa26.35■■□□□ 1.81
TPM1-232ENST00000561425 F6X3S4 739 aa26.34■■□□□ 1.81
TPM1-232ENST00000561425 EIF6P56537 245 aaKnown RBP26.34■■□□□ 1.81
TPM1-232ENST00000561425 NIM1KQ8IY84 436 aa26.34■■□□□ 1.81
TPM1-232ENST00000561425 TAF1DQ9H5J8 278 aaPredicted RBP26.34■■□□□ 1.81
TPM1-232ENST00000561425 PODXL2Q9NZ53 605 aa26.34■■□□□ 1.81
TPM1-232ENST00000561425 APLP1P51693 650 aa26.33■■□□□ 1.81
TPM1-232ENST00000561425 GPSM2P81274 684 aa26.33■■□□□ 1.81
TPM1-232ENST00000561425 DIEXFQ68CQ4 756 aaKnown RBP26.33■■□□□ 1.81
TPM1-232ENST00000561425 UBE3BQ7Z3V4 1068 aa26.33■■□□□ 1.81
TPM1-232ENST00000561425 POLLQ9UGP5 575 aa26.33■■□□□ 1.81
TPM1-232ENST00000561425 ZNRF3Q9ULT6 936 aa26.33■■□□□ 1.81
TPM1-232ENST00000561425 NSFL1CQ9UNZ2 370 aaKnown RBP26.33■■□□□ 1.81
TPM1-232ENST00000561425 CSF1RP07333 972 aa26.32■■□□□ 1.8
TPM1-232ENST00000561425 MRPL50Q8N5N7 158 aaKnown RBP26.32■■□□□ 1.8
TPM1-232ENST00000561425 SCN4AP35499 1836 aa26.31■■□□□ 1.8
TPM1-232ENST00000561425 MIER1Q8N108 512 aa26.31■■□□□ 1.8
TPM1-232ENST00000561425 HACL1Q9UJ83 578 aa26.31■■□□□ 1.8
TPM1-232ENST00000561425 GREM2Q9H772 168 aa26.3■■□□□ 1.8
TPM1-232ENST00000561425 LTBP1Q14766 1721 aa26.3■■□□□ 1.8
TPM1-232ENST00000561425 POTEIP0CG38 1075 aa26.29■■□□□ 1.8
TPM1-232ENST00000561425 POTEJP0CG39 1038 aa26.29■■□□□ 1.8
TPM1-232ENST00000561425 CXCL9Q07325 125 aa26.29■■□□□ 1.8
TPM1-232ENST00000561425 ANKRD18AQ8IVF6 992 aa26.29■■□□□ 1.8
TPM1-232ENST00000561425 TBC1D16Q8TBP0 767 aa26.29■■□□□ 1.8
TPM1-232ENST00000561425 CCDC85AQ96PX6 553 aaPredicted RBP26.29■■□□□ 1.8
TPM1-232ENST00000561425 SCNN1DP51172 638 aa26.28■■□□□ 1.8
TPM1-232ENST00000561425 WASHC4Q2M389 1173 aa26.28■■□□□ 1.8
TPM1-232ENST00000561425 CDC5LQ99459 802 aaKnown RBP26.28■■□□□ 1.8
TPM1-232ENST00000561425 YDJCA8MPS7 323 aa26.27■■□□□ 1.8
TPM1-232ENST00000561425 ALDH1L1O75891 902 aa26.27■■□□□ 1.8
TPM1-232ENST00000561425 EPHX2P34913 555 aa26.27■■□□□ 1.8
TPM1-232ENST00000561425 CHADLQ6NUI6 762 aa26.27■■□□□ 1.8
TPM1-232ENST00000561425 DNAJC5GQ8N7S2 189 aa26.27■■□□□ 1.8
TPM1-232ENST00000561425 SSH1Q8WYL5 1049 aa26.27■■□□□ 1.8
TPM1-232ENST00000561425 BSDC1Q9NW68 430 aaPredicted RBP26.27■■□□□ 1.8
TPM1-232ENST00000561425 CT47B1P0C2W7 299 aaPredicted RBP26.26■■□□□ 1.79
TPM1-232ENST00000561425 ALDH1L2Q3SY69 923 aa26.26■■□□□ 1.79
TPM1-232ENST00000561425 LDHDQ86WU2 507 aa26.26■■□□□ 1.79
TPM1-232ENST00000561425 GJA3Q9Y6H8 435 aa26.26■■□□□ 1.79
TPM1-232ENST00000561425 PTPRCP08575 1304 aa26.25■■□□□ 1.79
TPM1-232ENST00000561425 FOXO4P98177 505 aa26.25■■□□□ 1.79
TPM1-232ENST00000561425 PNMA8AQ86V59 439 aaPredicted RBP26.25■■□□□ 1.79
TPM1-232ENST00000561425 EYA3Q99504 573 aa26.25■■□□□ 1.79
TPM1-232ENST00000561425 C6orf229H3BNL8 230 aa26.24■■□□□ 1.79
TPM1-232ENST00000561425 GRM8O00222 908 aa26.23■■□□□ 1.79
TPM1-232ENST00000561425 CIAPIN1Q6FI81 312 aa26.23■■□□□ 1.79
TPM1-232ENST00000561425 MINPP1Q9UNW1 487 aa26.23■■□□□ 1.79
TPM1-232ENST00000561425 XDHP47989 1333 aa26.22■■□□□ 1.79
TPM1-232ENST00000561425 EPS15P42566 896 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms