RNA–Protein interactions for RNA: ENST00000561423.2

PRKXP1-201, Transcript of PRKX pseudogene 1, humanhuman

BASIC

Gene PRKXP1, Length 1,122 nt, Biotype processed pseudogene, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKXP1-201ENST00000561423 MPNDQ8N594 471 aa18.53■□□□□ 0.56
PRKXP1-201ENST00000561423 GRAPLQ8TC17 118 aaPredicted RBP18.53■□□□□ 0.56
PRKXP1-201ENST00000561423 ZNF428Q96B54 188 aa18.53■□□□□ 0.56
PRKXP1-201ENST00000561423 CAPNS2Q96L46 248 aa18.53■□□□□ 0.56
PRKXP1-201ENST00000561423 CYP4F22Q6NT55 531 aa18.52■□□□□ 0.56
PRKXP1-201ENST00000561423 PAXIP1Q6ZW49 1069 aaPredicted RBP18.52■□□□□ 0.56
PRKXP1-201ENST00000561423 DDX46Q7L014 1031 aaKnown RBP18.52■□□□□ 0.56
PRKXP1-201ENST00000561423 CHPF2Q9P2E5 772 aa18.52■□□□□ 0.56
PRKXP1-201ENST00000561423 LAMB2P55268 1798 aa18.52■□□□□ 0.55
PRKXP1-201ENST00000561423 ANKRD36CQ5JPF3 1778 aa18.52■□□□□ 0.55
PRKXP1-201ENST00000561423 DUOX1Q9NRD9 1551 aa18.51■□□□□ 0.55
PRKXP1-201ENST00000561423 RAD17O75943 681 aa18.51■□□□□ 0.55
PRKXP1-201ENST00000561423 CIAPIN1Q6FI81 312 aa18.51■□□□□ 0.55
PRKXP1-201ENST00000561423 TRIM35Q9UPQ4 493 aa18.51■□□□□ 0.55
PRKXP1-201ENST00000561423 TLL2Q9Y6L7 1015 aa18.51■□□□□ 0.55
PRKXP1-201ENST00000561423 YDJCA8MPS7 323 aa18.5■□□□□ 0.55
PRKXP1-201ENST00000561423 GRM1Q13255 1194 aa18.5■□□□□ 0.55
PRKXP1-201ENST00000561423 LAS1LQ9Y4W2 734 aaKnown RBP18.5■□□□□ 0.55
PRKXP1-201ENST00000561423 MYBBP1AQ9BQG0 1328 aaKnown RBP18.49■□□□□ 0.55
PRKXP1-201ENST00000561423 ECE1P42892 770 aa18.49■□□□□ 0.55
PRKXP1-201ENST00000561423 HIRAP54198 1017 aaPredicted RBP18.49■□□□□ 0.55
PRKXP1-201ENST00000561423 HDGFL1Q5TGJ6 251 aa18.49■□□□□ 0.55
PRKXP1-201ENST00000561423 TRPM4Q8TD43 1214 aa18.49■□□□□ 0.55
PRKXP1-201ENST00000561423 GPR101Q96P66 508 aaPredicted RBP18.49■□□□□ 0.55
PRKXP1-201ENST00000561423 GLIS2Q9BZE0 524 aaPredicted RBP18.49■□□□□ 0.55
PRKXP1-201ENST00000561423 CDHR2Q9BYE9 1310 aa18.49■□□□□ 0.55
PRKXP1-201ENST00000561423 SHTN1A0MZ66 631 aa18.48■□□□□ 0.55
PRKXP1-201ENST00000561423 CELF2O95319 508 aaKnown RBP18.48■□□□□ 0.55
PRKXP1-201ENST00000561423 PLBD2Q8NHP8 589 aa18.48■□□□□ 0.55
PRKXP1-201ENST00000561423 BCL2L13Q9BXK5 485 aa18.48■□□□□ 0.55
PRKXP1-201ENST00000561423 PGAP2Q9UHJ9 254 aa18.48■□□□□ 0.55
PRKXP1-201ENST00000561423 AOC2O75106 756 aa18.47■□□□□ 0.55
PRKXP1-201ENST00000561423 SAPCD2Q86UD0 394 aa18.47■□□□□ 0.55
PRKXP1-201ENST00000561423 CELF1Q92879 486 aaKnown RBP18.47■□□□□ 0.55
PRKXP1-201ENST00000561423 RUNDC1Q96C34 613 aa18.47■□□□□ 0.55
PRKXP1-201ENST00000561423 ISCA1Q9BUE6 129 aa18.47■□□□□ 0.55
PRKXP1-201ENST00000561423 COL4A1P02462 1669 aa18.47■□□□□ 0.55
PRKXP1-201ENST00000561423 LRRC37AA6NMS7 1700 aa18.46■□□□□ 0.55
PRKXP1-201ENST00000561423 ATP5J2-PTCD1G3V325 749 aa18.46■□□□□ 0.55
PRKXP1-201ENST00000561423 HOXB7P09629 217 aa18.46■□□□□ 0.55
PRKXP1-201ENST00000561423 TNIP1Q15025 636 aa18.46■□□□□ 0.55
PRKXP1-201ENST00000561423 TMC4Q7Z404 712 aa18.46■□□□□ 0.55
PRKXP1-201ENST00000561423 FAM89AQ96GI7 184 aa18.46■□□□□ 0.55
PRKXP1-201ENST00000561423 SF3B3Q15393 1217 aaKnown RBP18.45■□□□□ 0.54
PRKXP1-201ENST00000561423 ANKRD13DQ6ZTN6 518 aa18.45■□□□□ 0.54
PRKXP1-201ENST00000561423 ABHD8Q96I13 439 aa18.45■□□□□ 0.54
PRKXP1-201ENST00000561423 DBF4Q9UBU7 674 aaPredicted RBP18.45■□□□□ 0.54
PRKXP1-201ENST00000561423 CNOT7Q9UIV1 285 aaKnown RBP18.45■□□□□ 0.54
PRKXP1-201ENST00000561423 DDX60Q8IY21 1712 aaKnown RBP18.45■□□□□ 0.54
PRKXP1-201ENST00000561423 DDX10Q13206 875 aaKnown RBP18.44■□□□□ 0.54
PRKXP1-201ENST00000561423 MICALL2Q8IY33 904 aa18.44■□□□□ 0.54
PRKXP1-201ENST00000561423 ZC3H15Q8WU90 426 aaKnown RBP18.44■□□□□ 0.54
PRKXP1-201ENST00000561423 BEGAINQ9BUH8 593 aa18.44■□□□□ 0.54
PRKXP1-201ENST00000561423 ZNF408Q9H9D4 720 aa18.44■□□□□ 0.54
PRKXP1-201ENST00000561423 TSKSQ9UJT2 592 aa18.44■□□□□ 0.54
PRKXP1-201ENST00000561423 ADAMTS8Q9UP79 889 aa18.44■□□□□ 0.54
PRKXP1-201ENST00000561423 ZBTB12Q9Y330 459 aaPredicted RBP18.44■□□□□ 0.54
PRKXP1-201ENST00000561423 TRPM7Q96QT4 1865 aa18.43■□□□□ 0.54
PRKXP1-201ENST00000561423 MAP2K2P36507 400 aa18.43■□□□□ 0.54
PRKXP1-201ENST00000561423 WDR43Q15061 677 aaKnown RBP eCLIP18.43■□□□□ 0.54
PRKXP1-201ENST00000561423 WASHC4Q2M389 1173 aa18.43■□□□□ 0.54
PRKXP1-201ENST00000561423 RTL5Q5HYW3 569 aaPredicted RBP18.43■□□□□ 0.54
PRKXP1-201ENST00000561423 DBNDD1Q9H9R9 158 aa18.43■□□□□ 0.54
PRKXP1-201ENST00000561423 NSFL1CQ9UNZ2 370 aaKnown RBP18.43■□□□□ 0.54
PRKXP1-201ENST00000561423 TAF1P21675 1872 aa18.43■□□□□ 0.54
PRKXP1-201ENST00000561423 PSMD14O00487 310 aa18.42■□□□□ 0.54
PRKXP1-201ENST00000561423 GPSM2P81274 684 aa18.42■□□□□ 0.54
PRKXP1-201ENST00000561423 DUSP27Q5VZP5 1158 aa18.42■□□□□ 0.54
PRKXP1-201ENST00000561423 DLK2Q6UY11 383 aa18.42■□□□□ 0.54
PRKXP1-201ENST00000561423 CDC37L1Q7L3B6 337 aa18.42■□□□□ 0.54
PRKXP1-201ENST00000561423 HHIPL1Q96JK4 782 aa18.42■□□□□ 0.54
PRKXP1-201ENST00000561423 CFAP44Q96MT7 982 aa18.42■□□□□ 0.54
PRKXP1-201ENST00000561423 MBIPQ9NS73 344 aa18.42■□□□□ 0.54
PRKXP1-201ENST00000561423 POLLQ9UGP5 575 aa18.42■□□□□ 0.54
PRKXP1-201ENST00000561423 RIMBP2O15034 1052 aa18.41■□□□□ 0.54
PRKXP1-201ENST00000561423 SAMD7Q7Z3H4 446 aa18.41■□□□□ 0.54
PRKXP1-201ENST00000561423 HYPKQ9NX55 129 aa18.41■□□□□ 0.54
PRKXP1-201ENST00000561423 C6orf229H3BNL8 230 aa18.4■□□□□ 0.54
PRKXP1-201ENST00000561423 H7C1D1 291 aa18.4■□□□□ 0.54
PRKXP1-201ENST00000561423 IRS4O14654 1257 aaPredicted RBP18.4■□□□□ 0.54
PRKXP1-201ENST00000561423 EGFRP00533 1210 aa18.4■□□□□ 0.54
PRKXP1-201ENST00000561423 TRIM28Q13263 835 aaKnown RBP18.4■□□□□ 0.54
PRKXP1-201ENST00000561423 USP48Q86UV5 1035 aa18.4■□□□□ 0.54
PRKXP1-201ENST00000561423 DPF2Q92785 391 aa18.4■□□□□ 0.54
PRKXP1-201ENST00000561423 KCNQ5Q9NR82 932 aa18.4■□□□□ 0.54
PRKXP1-201ENST00000561423 RTL9Q8NET4 1388 aa18.4■□□□□ 0.54
PRKXP1-201ENST00000561423 ECE2O60344 883 aa18.39■□□□□ 0.53
PRKXP1-201ENST00000561423 TBC1D10BQ4KMP7 808 aaPredicted RBP18.39■□□□□ 0.53
PRKXP1-201ENST00000561423 ZNF853P0CG23 659 aa18.38■□□□□ 0.53
PRKXP1-201ENST00000561423 DOK7Q18PE1 504 aa18.38■□□□□ 0.53
PRKXP1-201ENST00000561423 TBC1D16Q8TBP0 767 aa18.38■□□□□ 0.53
PRKXP1-201ENST00000561423 PHAXQ9H814 394 aaKnown RBP18.38■□□□□ 0.53
PRKXP1-201ENST00000561423 BRPF1P55201 1214 aaPredicted RBP18.37■□□□□ 0.53
PRKXP1-201ENST00000561423 RPS8P62241 208 aaKnown RBP18.37■□□□□ 0.53
PRKXP1-201ENST00000561423 ZIC5Q96T25 663 aa18.37■□□□□ 0.53
PRKXP1-201ENST00000561423 EYA3Q99504 573 aa18.37■□□□□ 0.53
PRKXP1-201ENST00000561423 SEC31BQ9NQW1 1179 aa18.37■□□□□ 0.53
PRKXP1-201ENST00000561423 CA12O43570 354 aa18.36■□□□□ 0.53
PRKXP1-201ENST00000561423 RPS12P25398 132 aaKnown RBP18.36■□□□□ 0.53
PRKXP1-201ENST00000561423 GOLGA2Q08379 1002 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms