RNA–Protein interactions for RNA: ENST00000561212.5

ZEB1-222, Transcript of zinc finger E-box binding homeobox 1, human

TSL 5

Gene ZEB1, Length 1,500 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-222	ENST00000561212	ANTXR1	Q9H6X2	564 aa		9.12	□□□□□ -0.95
ZEB1-222	ENST00000561212	BMP2K	Q9NSY1	1161 aa	Predicted RBP	9.12	□□□□□ -0.95
ZEB1-222	ENST00000561212	STAP2	Q9UGK3	403 aa		9.12	□□□□□ -0.95
ZEB1-222	ENST00000561212	EXOC6B	Q9Y2D4	811 aa		9.12	□□□□□ -0.95
ZEB1-222	ENST00000561212		A0A087WZG4	1122 aa		9.11	□□□□□ -0.95
ZEB1-222	ENST00000561212	RGL2	O15211	777 aa		9.11	□□□□□ -0.95
ZEB1-222	ENST00000561212	CAMTA2	O94983	1202 aa		9.11	□□□□□ -0.95
ZEB1-222	ENST00000561212	SDS	P20132	328 aa		9.11	□□□□□ -0.95
ZEB1-222	ENST00000561212	MMRN1	Q13201	1228 aa		9.11	□□□□□ -0.95
ZEB1-222	ENST00000561212	CASC1	Q6TDU7	716 aa		9.11	□□□□□ -0.95
ZEB1-222	ENST00000561212	FAM196A	Q6ZSG2	479 aa		9.11	□□□□□ -0.95
ZEB1-222	ENST00000561212	KRT27	Q7Z3Y8	459 aa		9.11	□□□□□ -0.95
ZEB1-222	ENST00000561212	CWC25	Q9NXE8	425 aa	Predicted RBP	9.11	□□□□□ -0.95
ZEB1-222	ENST00000561212		A0A0G2JS52	829 aa		9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	APBB1	O00213	710 aa		9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	SRGAP3	O43295	1099 aa		9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	TIE1	P35590	1138 aa		9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	KCNQ4	P56696	695 aa		9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	NFKBIB	Q15653	356 aa		9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	UBE3B	Q7Z3V4	1068 aa		9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	NLRP10	Q86W26	655 aa		9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	AMIGO3	Q86WK7	504 aa		9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	PLA2G12B	Q9BX93	195 aa		9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	LRRC4B	Q9NT99	713 aa		9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	UBN2	Q6ZU65	1347 aa		9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	PCCA	P05165	728 aa	Predicted RBP	9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	C4B	P0C0L5	1744 aa		9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	MX1	P20591	662 aa		9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	VASP	P50552	380 aa	Predicted RBP	9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	HSP90AB4P	Q58FF6	505 aa		9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	DZIP3	Q86Y13	1208 aa	Known RBP	9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	HSCB	Q8IWL3	235 aa		9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	JARID2	Q92833	1246 aa	Predicted RBP	9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	KIF2C	Q99661	725 aa		9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	COPRS	Q9NQ92	184 aa		9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	TBC1D2B	Q9UPU7	963 aa		9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	TRPC6	Q9Y210	931 aa		9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	9.1	□□□□□ -0.95
ZEB1-222	ENST00000561212	CDHR2	Q9BYE9	1310 aa		9.09	□□□□□ -0.95
ZEB1-222	ENST00000561212	RPS6KA4	O75676	772 aa		9.09	□□□□□ -0.95
ZEB1-222	ENST00000561212	CSF1R	P07333	972 aa		9.09	□□□□□ -0.95
ZEB1-222	ENST00000561212	PTPN12	Q05209	780 aa	Known RBP	9.09	□□□□□ -0.95
ZEB1-222	ENST00000561212	HSP90AB3P	Q58FF7	597 aa		9.09	□□□□□ -0.95
ZEB1-222	ENST00000561212	POTEA	Q6S8J7	498 aa		9.09	□□□□□ -0.95
ZEB1-222	ENST00000561212	KIF6	Q6ZMV9	814 aa		9.09	□□□□□ -0.95
ZEB1-222	ENST00000561212	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	9.09	□□□□□ -0.95
ZEB1-222	ENST00000561212	BCL2L12	Q9HB09	334 aa		9.09	□□□□□ -0.95
ZEB1-222	ENST00000561212	SCN7A	Q01118	1682 aa		9.09	□□□□□ -0.95
ZEB1-222	ENST00000561212	SASH1	O94885	1247 aa		9.08	□□□□□ -0.96
ZEB1-222	ENST00000561212	REC8	O95072	547 aa		9.08	□□□□□ -0.96
ZEB1-222	ENST00000561212	CLEC4G	Q6UXB4	293 aa		9.08	□□□□□ -0.96
ZEB1-222	ENST00000561212	SYNE4	Q8N205	404 aa		9.08	□□□□□ -0.96
ZEB1-222	ENST00000561212	RHPN1	Q8TCX5	695 aa		9.08	□□□□□ -0.96
ZEB1-222	ENST00000561212	KIF1BP	Q96EK5	621 aa		9.08	□□□□□ -0.96
ZEB1-222	ENST00000561212	PA2G4	Q9UQ80	394 aa	Known RBP	9.08	□□□□□ -0.96
ZEB1-222	ENST00000561212	UBR3	Q6ZT12	1888 aa		9.08	□□□□□ -0.96
ZEB1-222	ENST00000561212	C4A	P0C0L4	1744 aa		9.08	□□□□□ -0.96
ZEB1-222	ENST00000561212	USP42	Q9H9J4	1324 aa	Known RBP	9.07	□□□□□ -0.96
ZEB1-222	ENST00000561212	ERC2	O15083	957 aa		9.07	□□□□□ -0.96
ZEB1-222	ENST00000561212	SURF6	O75683	361 aa	Known RBP	9.07	□□□□□ -0.96
ZEB1-222	ENST00000561212	RABEP1	Q15276	862 aa		9.07	□□□□□ -0.96
ZEB1-222	ENST00000561212	USP26	Q9BXU7	913 aa		9.07	□□□□□ -0.96
ZEB1-222	ENST00000561212	SCUBE2	Q9NQ36	999 aa		9.07	□□□□□ -0.96
ZEB1-222	ENST00000561212	CCNL1	Q9UK58	526 aa	Predicted RBP	9.07	□□□□□ -0.96
ZEB1-222	ENST00000561212	MYH3	P11055	1940 aa		9.07	□□□□□ -0.96
ZEB1-222	ENST00000561212	COL24A1	Q17RW2	1714 aa		9.07	□□□□□ -0.96
ZEB1-222	ENST00000561212	DDX60	Q8IY21	1712 aa	Known RBP	9.07	□□□□□ -0.96
ZEB1-222	ENST00000561212	PLSCR1	O15162	318 aa		9.06	□□□□□ -0.96
ZEB1-222	ENST00000561212	RXRB	P28702	533 aa		9.06	□□□□□ -0.96
ZEB1-222	ENST00000561212	NUBP1	P53384	320 aa		9.06	□□□□□ -0.96
ZEB1-222	ENST00000561212	LMBR1L	Q6UX01	489 aa		9.06	□□□□□ -0.96
ZEB1-222	ENST00000561212	FAM89A	Q96GI7	184 aa		9.06	□□□□□ -0.96
ZEB1-222	ENST00000561212	SGIP1	Q9BQI5	828 aa		9.06	□□□□□ -0.96
ZEB1-222	ENST00000561212	ZNF330	Q9Y3S2	320 aa	Predicted RBP	9.06	□□□□□ -0.96
ZEB1-222	ENST00000561212	TNS1	Q9HBL0	1735 aa	Known RBP	9.06	□□□□□ -0.96
ZEB1-222	ENST00000561212	RGPD3	A6NKT7	1758 aa	Predicted RBP	9.06	□□□□□ -0.96
ZEB1-222	ENST00000561212	LAMB2	P55268	1798 aa		9.06	□□□□□ -0.96
ZEB1-222	ENST00000561212	RGPD4	Q7Z3J3	1758 aa		9.06	□□□□□ -0.96
ZEB1-222	ENST00000561212	TRIM37	O94972	964 aa		9.05	□□□□□ -0.96
ZEB1-222	ENST00000561212	NTSR2	O95665	410 aa		9.05	□□□□□ -0.96
ZEB1-222	ENST00000561212	GPT	P24298	496 aa		9.05	□□□□□ -0.96
ZEB1-222	ENST00000561212	DDIT3	P35638	169 aa		9.05	□□□□□ -0.96
ZEB1-222	ENST00000561212	SLC27A3	Q5K4L6	730 aa		9.05	□□□□□ -0.96
ZEB1-222	ENST00000561212	SUSD4	Q5VX71	490 aa		9.05	□□□□□ -0.96
ZEB1-222	ENST00000561212	SMIM5	Q71RC9	77 aa		9.05	□□□□□ -0.96
ZEB1-222	ENST00000561212	ATG9A	Q7Z3C6	839 aa		9.05	□□□□□ -0.96
ZEB1-222	ENST00000561212	ERC1	Q8IUD2	1116 aa		9.05	□□□□□ -0.96
ZEB1-222	ENST00000561212	KLHDC4	Q8TBB5	520 aa		9.05	□□□□□ -0.96
ZEB1-222	ENST00000561212	SLK	Q9H2G2	1235 aa	Predicted RBP	9.05	□□□□□ -0.96
ZEB1-222	ENST00000561212	CHMP5	Q9NZZ3	219 aa		9.05	□□□□□ -0.96
ZEB1-222	ENST00000561212	NARF	Q9UHQ1	456 aa		9.05	□□□□□ -0.96
ZEB1-222	ENST00000561212	PCDHB13	Q9Y5F0	798 aa		9.05	□□□□□ -0.96
ZEB1-222	ENST00000561212	TTLL13P	A6NNM8	815 aa		9.05	□□□□□ -0.96
ZEB1-222	ENST00000561212	EPB41L2	O43491	1005 aa	Known RBP	9.05	□□□□□ -0.96
ZEB1-222	ENST00000561212	TTLL11	Q8NHH1	800 aa		9.05	□□□□□ -0.96
ZEB1-222	ENST00000561212	PI4K2B	Q8TCG2	481 aa		9.05	□□□□□ -0.96
ZEB1-222	ENST00000561212	ARHGEF1	Q92888	912 aa	Known RBP	9.05	□□□□□ -0.96
ZEB1-222	ENST00000561212	FAM212A	Q96EL1	285 aa		9.05	□□□□□ -0.96
ZEB1-222	ENST00000561212	AK7	Q96M32	723 aa		9.05	□□□□□ -0.96
ZEB1-222	ENST00000561212	BCL11A	Q9H165	835 aa		9.05	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms