RNA–Protein interactions for RNA: ENST00000560997.1

SNX22-206, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 3,367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-206ENST00000560997 PSMA5P28066 241 aa11.67□□□□□ -0.54
SNX22-206ENST00000560997 TOB2Q14106 344 aaPredicted RBP11.67□□□□□ -0.54
SNX22-206ENST00000560997 IFNL2Q8IZJ0 200 aa11.67□□□□□ -0.54
SNX22-206ENST00000560997 SNRPA1P09661 255 aaKnown RBP11.67□□□□□ -0.54
SNX22-206ENST00000560997 RPS6KB1P23443 525 aa11.67□□□□□ -0.54
SNX22-206ENST00000560997 STK3Q13188 491 aa11.67□□□□□ -0.54
SNX22-206ENST00000560997 TNNI3KQ59H18 835 aa11.67□□□□□ -0.54
SNX22-206ENST00000560997 LARP1BQ659C4 914 aaKnown RBP11.67□□□□□ -0.54
SNX22-206ENST00000560997 FPGT-TNNI3KV9GXZ4 949 aa11.67□□□□□ -0.54
SNX22-206ENST00000560997 TAF5LO75529 589 aa11.67□□□□□ -0.54
SNX22-206ENST00000560997 CCDC129Q6ZRS4 1044 aa11.67□□□□□ -0.54
SNX22-206ENST00000560997 TTC5Q8N0Z6 440 aa11.67□□□□□ -0.54
SNX22-206ENST00000560997 UBE2Q2Q8WVN8 375 aa11.67□□□□□ -0.54
SNX22-206ENST00000560997 C19orf44Q9H6X5 657 aa11.67□□□□□ -0.54
SNX22-206ENST00000560997 COPRSQ9NQ92 184 aa11.67□□□□□ -0.54
SNX22-206ENST00000560997 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.67□□□□□ -0.54
SNX22-206ENST00000560997 JCADQ9P266 1359 aa11.67□□□□□ -0.54
SNX22-206ENST00000560997 FAM184AQ8NB25 1140 aa11.66□□□□□ -0.54
SNX22-206ENST00000560997 MCM5P33992 734 aa11.66□□□□□ -0.54
SNX22-206ENST00000560997 RNF20Q5VTR2 975 aa11.66□□□□□ -0.54
SNX22-206ENST00000560997 DNAJC2Q99543 621 aaKnown RBP11.66□□□□□ -0.54
SNX22-206ENST00000560997 DBNDD2Q9BQY9 259 aa11.66□□□□□ -0.54
SNX22-206ENST00000560997 FUCA2Q9BTY2 467 aa11.66□□□□□ -0.54
SNX22-206ENST00000560997 CCDC9Q9Y3X0 531 aaKnown RBP11.66□□□□□ -0.54
SNX22-206ENST00000560997 MST1RQ04912 1400 aa11.66□□□□□ -0.54
SNX22-206ENST00000560997 COL18A1P39060 1754 aa11.66□□□□□ -0.54
SNX22-206ENST00000560997 TTC6Q86TZ1 520 aa11.65□□□□□ -0.54
SNX22-206ENST00000560997 ZNF830Q96NB3 372 aaPredicted RBP11.65□□□□□ -0.54
SNX22-206ENST00000560997 SEC62Q99442 399 aaKnown RBP11.65□□□□□ -0.54
SNX22-206ENST00000560997 CHMP3Q9Y3E7 222 aa11.65□□□□□ -0.54
SNX22-206ENST00000560997 ARFGEF2Q9Y6D5 1785 aa11.65□□□□□ -0.54
SNX22-206ENST00000560997 A0A087WZG4 1122 aa11.65□□□□□ -0.54
SNX22-206ENST00000560997 ADCY5O95622 1261 aa11.65□□□□□ -0.54
SNX22-206ENST00000560997 ATP5JP18859 108 aa11.65□□□□□ -0.54
SNX22-206ENST00000560997 HSP90AA2PQ14568 343 aaPredicted RBP11.65□□□□□ -0.54
SNX22-206ENST00000560997 UVSSAQ2YD98 709 aa11.65□□□□□ -0.54
SNX22-206ENST00000560997 ZNF609O15014 1411 aa11.65□□□□□ -0.54
SNX22-206ENST00000560997 LETM1O95202 739 aaPredicted RBP11.65□□□□□ -0.54
SNX22-206ENST00000560997 DCAF5Q96JK2 942 aa11.65□□□□□ -0.54
SNX22-206ENST00000560997 FMNL2Q96PY5 1086 aa11.65□□□□□ -0.54
SNX22-206ENST00000560997 CSPP1Q1MSJ5 1256 aa11.64□□□□□ -0.55
SNX22-206ENST00000560997 RABL6Q3YEC7 729 aaPredicted RBP11.64□□□□□ -0.55
SNX22-206ENST00000560997 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.64□□□□□ -0.55
SNX22-206ENST00000560997 DDX46Q7L014 1031 aaKnown RBP11.64□□□□□ -0.55
SNX22-206ENST00000560997 CASP7P55210 303 aa11.64□□□□□ -0.55
SNX22-206ENST00000560997 ANKRD1Q15327 319 aa11.64□□□□□ -0.55
SNX22-206ENST00000560997 USPL1Q5W0Q7 1092 aa11.64□□□□□ -0.55
SNX22-206ENST00000560997 HMG20BQ9P0W2 317 aa11.64□□□□□ -0.55
SNX22-206ENST00000560997 GLI3P10071 1580 aa11.63□□□□□ -0.55
SNX22-206ENST00000560997 AP5Z1O43299 807 aa11.63□□□□□ -0.55
SNX22-206ENST00000560997 JAK2O60674 1132 aa11.63□□□□□ -0.55
SNX22-206ENST00000560997 KRT85P78386 507 aa11.63□□□□□ -0.55
SNX22-206ENST00000560997 TSGA10IPQ3SY00 556 aa11.63□□□□□ -0.55
SNX22-206ENST00000560997 SLFNL1Q499Z3 407 aa11.63□□□□□ -0.55
SNX22-206ENST00000560997 RRP9O43818 475 aaKnown RBP11.63□□□□□ -0.55
SNX22-206ENST00000560997 LIG1P18858 919 aa11.63□□□□□ -0.55
SNX22-206ENST00000560997 CABP4P57796 275 aa11.63□□□□□ -0.55
SNX22-206ENST00000560997 PLCB2Q00722 1185 aa11.63□□□□□ -0.55
SNX22-206ENST00000560997 LMBR1LQ6UX01 489 aa11.63□□□□□ -0.55
SNX22-206ENST00000560997 ATF3P18847 181 aa11.62□□□□□ -0.55
SNX22-206ENST00000560997 ALDH8A1Q9H2A2 487 aaPredicted RBP11.62□□□□□ -0.55
SNX22-206ENST00000560997 TTC12Q9H892 705 aaPredicted RBP11.62□□□□□ -0.55
SNX22-206ENST00000560997 TFIP11Q9UBB9 837 aaKnown RBP11.62□□□□□ -0.55
SNX22-206ENST00000560997 KDM4AO75164 1064 aa11.62□□□□□ -0.55
SNX22-206ENST00000560997 LRRC2Q9BYS8 371 aa11.62□□□□□ -0.55
SNX22-206ENST00000560997 NBPF26B4DH59 902 aa11.62□□□□□ -0.55
SNX22-206ENST00000560997 CYP21A2P08686 494 aa11.62□□□□□ -0.55
SNX22-206ENST00000560997 PDCP20941 246 aa11.62□□□□□ -0.55
SNX22-206ENST00000560997 CAMK4Q16566 473 aa11.62□□□□□ -0.55
SNX22-206ENST00000560997 NBPF14Q5TI25 921 aa11.62□□□□□ -0.55
SNX22-206ENST00000560997 NBPF10Q6P3W6 841 aaKnown RBP11.62□□□□□ -0.55
SNX22-206ENST00000560997 NBPF15Q8N660 670 aa11.62□□□□□ -0.55
SNX22-206ENST00000560997 HAUS7Q99871 368 aa11.62□□□□□ -0.55
SNX22-206ENST00000560997 TMEM94Q12767 1356 aa11.62□□□□□ -0.55
SNX22-206ENST00000560997 PKD1L3Q7Z443 1732 aa11.61□□□□□ -0.55
SNX22-206ENST00000560997 KIAA2012Q0VF49 1180 aa11.61□□□□□ -0.55
SNX22-206ENST00000560997 PLBD2Q8NHP8 589 aa11.61□□□□□ -0.55
SNX22-206ENST00000560997 NEK1Q96PY6 1258 aa11.61□□□□□ -0.55
SNX22-206ENST00000560997 TERF1P54274 439 aa11.61□□□□□ -0.55
SNX22-206ENST00000560997 FOXO4P98177 505 aa11.61□□□□□ -0.55
SNX22-206ENST00000560997 TTLL7Q6ZT98 887 aa11.61□□□□□ -0.55
SNX22-206ENST00000560997 Q6ZUG5 572 aa11.61□□□□□ -0.55
SNX22-206ENST00000560997 C17orf53Q8N3J3 647 aaPredicted RBP11.61□□□□□ -0.55
SNX22-206ENST00000560997 RBM10P98175 930 aaKnown RBP11.61□□□□□ -0.55
SNX22-206ENST00000560997 GTF3C6Q969F1 213 aa11.61□□□□□ -0.55
SNX22-206ENST00000560997 UQCRHLA0A096LP55 91 aa11.6□□□□□ -0.55
SNX22-206ENST00000560997 UQCRHP07919 91 aa11.6□□□□□ -0.55
SNX22-206ENST00000560997 MCMDC2Q4G0Z9 681 aa11.6□□□□□ -0.55
SNX22-206ENST00000560997 STOX1Q6ZVD7 989 aa11.6□□□□□ -0.55
SNX22-206ENST00000560997 ELP1O95163 1332 aa11.6□□□□□ -0.55
SNX22-206ENST00000560997 HSP90B1P14625 803 aaKnown RBP11.6□□□□□ -0.55
SNX22-206ENST00000560997 KRT32Q14532 448 aa11.6□□□□□ -0.55
SNX22-206ENST00000560997 ATG9AQ7Z3C6 839 aa11.6□□□□□ -0.55
SNX22-206ENST00000560997 DDX11Q96FC9 970 aa11.6□□□□□ -0.55
SNX22-206ENST00000560997 NEUROD6Q96NK8 337 aa11.6□□□□□ -0.55
SNX22-206ENST00000560997 LAMB4A4D0S4 1761 aa11.6□□□□□ -0.55
SNX22-206ENST00000560997 ABCC6O95255 1503 aa11.59□□□□□ -0.55
SNX22-206ENST00000560997 GOLIM4O00461 696 aa11.59□□□□□ -0.55
SNX22-206ENST00000560997 TIMM10P62072 90 aa11.59□□□□□ -0.55
SNX22-206ENST00000560997 BRF1Q92994 677 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms