RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 FCHSD1Q86WN1 690 aa6.43□□□□□ -1.38
HERC1-211ENST00000560983 AIDAQ96BJ3 306 aa6.43□□□□□ -1.38
HERC1-211ENST00000560983 CABP1Q9NZU7 370 aa6.43□□□□□ -1.38
HERC1-211ENST00000560983 KIAA1024Q9UPX6 916 aa6.43□□□□□ -1.38
HERC1-211ENST00000560983 SAMD9Q5K651 1589 aa6.43□□□□□ -1.38
HERC1-211ENST00000560983 JCADQ9P266 1359 aa6.43□□□□□ -1.38
HERC1-211ENST00000560983 CTTNBP2Q8WZ74 1663 aa6.42□□□□□ -1.38
HERC1-211ENST00000560983 DCDC2BA2VCK2 349 aa6.42□□□□□ -1.38
HERC1-211ENST00000560983 M0R2N6 131 aa6.42□□□□□ -1.38
HERC1-211ENST00000560983 RAD21O60216 631 aa6.42□□□□□ -1.38
HERC1-211ENST00000560983 NOS2P35228 1153 aa6.42□□□□□ -1.38
HERC1-211ENST00000560983 RANGAP1P46060 587 aaPredicted RBP6.42□□□□□ -1.38
HERC1-211ENST00000560983 HIRAP54198 1017 aaPredicted RBP6.42□□□□□ -1.38
HERC1-211ENST00000560983 CLDN10P78369 228 aa6.42□□□□□ -1.38
HERC1-211ENST00000560983 TRIM50Q86XT4 487 aa6.42□□□□□ -1.38
HERC1-211ENST00000560983 DEPDC4Q8N2C3 294 aa6.42□□□□□ -1.38
HERC1-211ENST00000560983 L3MBTL2Q969R5 705 aa6.42□□□□□ -1.38
HERC1-211ENST00000560983 SETBP1Q9Y6X0 1596 aa6.42□□□□□ -1.38
HERC1-211ENST00000560983 MROH2AA6NES4 1674 aa6.42□□□□□ -1.38
HERC1-211ENST00000560983 TNRQ92752 1358 aa6.42□□□□□ -1.38
HERC1-211ENST00000560983 CDK12Q9NYV4 1490 aaPredicted RBP6.41□□□□□ -1.38
HERC1-211ENST00000560983 USP17L3A6NCW0 530 aa6.41□□□□□ -1.38
HERC1-211ENST00000560983 USP17L4A6NCW7 530 aa6.41□□□□□ -1.38
HERC1-211ENST00000560983 NEURL1BA8MQ27 555 aa6.41□□□□□ -1.38
HERC1-211ENST00000560983 KHNYNO15037 678 aaKnown RBP6.41□□□□□ -1.38
HERC1-211ENST00000560983 UBTFP17480 764 aaKnown RBP6.41□□□□□ -1.38
HERC1-211ENST00000560983 CD33P20138 364 aa6.41□□□□□ -1.38
HERC1-211ENST00000560983 ADH6P28332 368 aa6.41□□□□□ -1.38
HERC1-211ENST00000560983 ARSJQ5FYB0 599 aaPredicted RBP6.41□□□□□ -1.38
HERC1-211ENST00000560983 ZNF468Q5VIY5 522 aaPredicted RBP6.41□□□□□ -1.38
HERC1-211ENST00000560983 USP17L2Q6R6M4 530 aa6.41□□□□□ -1.38
HERC1-211ENST00000560983 USP17L1Q7RTZ2 530 aa6.41□□□□□ -1.38
HERC1-211ENST00000560983 SLC9A9Q8IVB4 645 aa6.41□□□□□ -1.38
HERC1-211ENST00000560983 FNBP4Q8N3X1 1017 aaPredicted RBP6.41□□□□□ -1.38
HERC1-211ENST00000560983 SUV39H2Q9H5I1 410 aa6.41□□□□□ -1.38
HERC1-211ENST00000560983 STRN4Q9NRL3 753 aa6.41□□□□□ -1.38
HERC1-211ENST00000560983 ABCC1P33527 1531 aa6.4□□□□□ -1.38
HERC1-211ENST00000560983 CDK13Q14004 1512 aaKnown RBP6.4□□□□□ -1.38
HERC1-211ENST00000560983 LRP6O75581 1613 aa6.4□□□□□ -1.38
HERC1-211ENST00000560983 RNF17Q9BXT8 1623 aaKnown RBP6.4□□□□□ -1.38
HERC1-211ENST00000560983 STRCP1A6NGW2 1772 aa6.4□□□□□ -1.38
HERC1-211ENST00000560983 GNB5O14775 395 aa6.4□□□□□ -1.38
HERC1-211ENST00000560983 ATP9BO43861 1147 aa6.4□□□□□ -1.38
HERC1-211ENST00000560983 ATP1A2P50993 1020 aa6.4□□□□□ -1.38
HERC1-211ENST00000560983 CHSY3Q70JA7 882 aa6.4□□□□□ -1.38
HERC1-211ENST00000560983 TNS4Q8IZW8 715 aa6.4□□□□□ -1.38
HERC1-211ENST00000560983 SIX5Q8N196 739 aa6.4□□□□□ -1.38
HERC1-211ENST00000560983 PARP3Q9Y6F1 533 aa6.4□□□□□ -1.38
HERC1-211ENST00000560983 ARHGAP5Q13017 1502 aa6.4□□□□□ -1.39
HERC1-211ENST00000560983 ADAM23O75077 832 aa6.39□□□□□ -1.39
HERC1-211ENST00000560983 PSME1Q06323 249 aa6.39□□□□□ -1.39
HERC1-211ENST00000560983 SH3PXD2AQ5TCZ1 1133 aa6.39□□□□□ -1.39
HERC1-211ENST00000560983 HDGFL1Q5TGJ6 251 aa6.39□□□□□ -1.39
HERC1-211ENST00000560983 LARGE2Q8N3Y3 721 aa6.39□□□□□ -1.39
HERC1-211ENST00000560983 TPCN2Q8NHX9 752 aa6.39□□□□□ -1.39
HERC1-211ENST00000560983 RRAGCQ9HB90 399 aa6.39□□□□□ -1.39
HERC1-211ENST00000560983 MARK1Q9P0L2 795 aa6.39□□□□□ -1.39
HERC1-211ENST00000560983 SLAIN2Q9P270 581 aa6.39□□□□□ -1.39
HERC1-211ENST00000560983 CDK11AQ9UQ88 783 aaPredicted RBP6.39□□□□□ -1.39
HERC1-211ENST00000560983 SPAG9O60271 1321 aaKnown RBP6.39□□□□□ -1.39
HERC1-211ENST00000560983 SPATA31A6Q5VVP1 1343 aa6.39□□□□□ -1.39
HERC1-211ENST00000560983 MIA2Q96PC5 1412 aa6.39□□□□□ -1.39
HERC1-211ENST00000560983 PIK3R2O00459 728 aa6.38□□□□□ -1.39
HERC1-211ENST00000560983 LTKP29376 864 aa6.38□□□□□ -1.39
HERC1-211ENST00000560983 HNRNPMP52272 730 aaKnown RBP eCLIP6.38□□□□□ -1.39
HERC1-211ENST00000560983 PSMA6P60900 246 aaKnown RBP6.38□□□□□ -1.39
HERC1-211ENST00000560983 MEX3CQ5U5Q3 659 aaKnown RBP6.38□□□□□ -1.39
HERC1-211ENST00000560983 C1orf53Q5VUE5 145 aa6.38□□□□□ -1.39
HERC1-211ENST00000560983 CCDC102BQ68D86 513 aa6.38□□□□□ -1.39
HERC1-211ENST00000560983 TMEM94Q12767 1356 aa6.38□□□□□ -1.39
HERC1-211ENST00000560983 KIDINS220Q9ULH0 1771 aa6.38□□□□□ -1.39
HERC1-211ENST00000560983 CLTCQ00610 1675 aaKnown RBP6.37□□□□□ -1.39
HERC1-211ENST00000560983 SERTM1A2A2V5 107 aa6.37□□□□□ -1.39
HERC1-211ENST00000560983 AMPD1P23109 780 aa6.37□□□□□ -1.39
HERC1-211ENST00000560983 RBM6P78332 1123 aaKnown RBP6.37□□□□□ -1.39
HERC1-211ENST00000560983 TBCELQ5QJ74 424 aa6.37□□□□□ -1.39
HERC1-211ENST00000560983 BICDL1Q6ZP65 573 aa6.37□□□□□ -1.39
HERC1-211ENST00000560983 TSPAN10Q9H1Z9 355 aaPredicted RBP6.37□□□□□ -1.39
HERC1-211ENST00000560983 QTRT2Q9H974 415 aaKnown RBP6.37□□□□□ -1.39
HERC1-211ENST00000560983 DEPDC5O75140 1603 aa6.36□□□□□ -1.39
HERC1-211ENST00000560983 FAM135AQ9P2D6 1515 aa6.36□□□□□ -1.39
HERC1-211ENST00000560983 A2MP01023 1474 aa6.36□□□□□ -1.39
HERC1-211ENST00000560983 RGS12O14924 1447 aa6.36□□□□□ -1.39
HERC1-211ENST00000560983 TROQ12816 1431 aaPredicted RBP6.36□□□□□ -1.39
HERC1-211ENST00000560983 PALM3A6NDB9 673 aaPredicted RBP6.36□□□□□ -1.39
HERC1-211ENST00000560983 ADARB2-AS1A8MUL3 147 aa6.36□□□□□ -1.39
HERC1-211ENST00000560983 C21orf2O43822 256 aa6.36□□□□□ -1.39
HERC1-211ENST00000560983 SIN3BO75182 1162 aa6.36□□□□□ -1.39
HERC1-211ENST00000560983 KCNQ4P56696 695 aa6.36□□□□□ -1.39
HERC1-211ENST00000560983 LRRC69Q6ZNQ3 347 aa6.36□□□□□ -1.39
HERC1-211ENST00000560983 STAG2Q8N3U4 1231 aa6.36□□□□□ -1.39
HERC1-211ENST00000560983 OGFOD1Q8N543 542 aa6.36□□□□□ -1.39
HERC1-211ENST00000560983 NOP53Q9NZM5 478 aaKnown RBP6.36□□□□□ -1.39
HERC1-211ENST00000560983 MKRN1Q9UHC7 482 aaKnown RBP6.36□□□□□ -1.39
HERC1-211ENST00000560983 GJA3Q9Y6H8 435 aa6.36□□□□□ -1.39
HERC1-211ENST00000560983 SYNMO15061 1565 aa6.35□□□□□ -1.39
HERC1-211ENST00000560983 KDM5DQ9BY66 1539 aa6.35□□□□□ -1.39
HERC1-211ENST00000560983 AFF2P51816 1311 aa6.35□□□□□ -1.39
HERC1-211ENST00000560983 ELOA3CA0A087WX78 387 aaPredicted RBP6.35□□□□□ -1.39
HERC1-211ENST00000560983 ELOA3DA6NLF2 546 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms