RNA–Protein interactions for RNA: ENST00000560885.5

USP8-213, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-213ENST00000560885 PASKQ96RG2 1323 aa8.67□□□□□ -1.02
USP8-213ENST00000560885 NBPF3Q9H094 633 aa8.67□□□□□ -1.02
USP8-213ENST00000560885 ZNF330Q9Y3S2 320 aaPredicted RBP8.67□□□□□ -1.02
USP8-213ENST00000560885 TMEM88BA6NKF7 163 aa8.66□□□□□ -1.02
USP8-213ENST00000560885 FOXN1O15353 648 aa8.66□□□□□ -1.02
USP8-213ENST00000560885 CAMTA2O94983 1202 aa8.66□□□□□ -1.02
USP8-213ENST00000560885 PTPREP23469 700 aa8.66□□□□□ -1.02
USP8-213ENST00000560885 DSG2Q14126 1118 aa8.66□□□□□ -1.02
USP8-213ENST00000560885 CLEC4GQ6UXB4 293 aa8.66□□□□□ -1.02
USP8-213ENST00000560885 OXER1Q8TDS5 423 aa8.66□□□□□ -1.02
USP8-213ENST00000560885 C7orf43Q8WVR3 580 aa8.66□□□□□ -1.02
USP8-213ENST00000560885 WNT2BQ93097 391 aa8.66□□□□□ -1.02
USP8-213ENST00000560885 AIDAQ96BJ3 306 aa8.66□□□□□ -1.02
USP8-213ENST00000560885 TAF1DQ9H5J8 278 aaPredicted RBP8.66□□□□□ -1.02
USP8-213ENST00000560885 TNRC18O15417 2968 aaPredicted RBP8.66□□□□□ -1.02
USP8-213ENST00000560885 COL3A1P02461 1466 aaPredicted RBP8.65□□□□□ -1.02
USP8-213ENST00000560885 CEMIPQ8WUJ3 1361 aa8.65□□□□□ -1.02
USP8-213ENST00000560885 KLRG2A4D1S0 409 aaPredicted RBP8.65□□□□□ -1.02
USP8-213ENST00000560885 ITGBL1O95965 494 aaPredicted RBP8.65□□□□□ -1.02
USP8-213ENST00000560885 A1BGP04217 495 aa8.65□□□□□ -1.02
USP8-213ENST00000560885 NPR1P16066 1061 aa8.65□□□□□ -1.02
USP8-213ENST00000560885 CTCFP49711 727 aaPredicted RBP8.65□□□□□ -1.02
USP8-213ENST00000560885 CCDC93Q567U6 631 aa8.65□□□□□ -1.02
USP8-213ENST00000560885 DZIP3Q86Y13 1208 aaKnown RBP8.65□□□□□ -1.02
USP8-213ENST00000560885 GAS2L2Q8NHY3 880 aa8.65□□□□□ -1.02
USP8-213ENST00000560885 TRPM7Q96QT4 1865 aa8.64□□□□□ -1.03
USP8-213ENST00000560885 RGL2O15211 777 aa8.64□□□□□ -1.03
USP8-213ENST00000560885 PER1O15534 1290 aaPredicted RBP8.64□□□□□ -1.03
USP8-213ENST00000560885 VEGFBP49765 207 aa8.64□□□□□ -1.03
USP8-213ENST00000560885 FKBP4Q02790 459 aaKnown RBP eCLIP8.64□□□□□ -1.03
USP8-213ENST00000560885 PNMA8AQ86V59 439 aaPredicted RBP8.64□□□□□ -1.03
USP8-213ENST00000560885 NBPF5PQ86XG9 351 aaPredicted RBP8.64□□□□□ -1.03
USP8-213ENST00000560885 ZNF454Q8N9F8 522 aa8.64□□□□□ -1.03
USP8-213ENST00000560885 ZBED2Q9BTP6 218 aa8.64□□□□□ -1.03
USP8-213ENST00000560885 WBP1LQ9NX94 342 aa8.64□□□□□ -1.03
USP8-213ENST00000560885 HACL1Q9UJ83 578 aa8.64□□□□□ -1.03
USP8-213ENST00000560885 ZNF652Q9Y2D9 606 aa8.64□□□□□ -1.03
USP8-213ENST00000560885 NUP98P52948 1817 aa8.64□□□□□ -1.03
USP8-213ENST00000560885 LAMB4A4D0S4 1761 aa8.63□□□□□ -1.03
USP8-213ENST00000560885 THSD7BQ9C0I4 1608 aa8.63□□□□□ -1.03
USP8-213ENST00000560885 RASSF10A6NK89 507 aa8.63□□□□□ -1.03
USP8-213ENST00000560885 BTBD11A6QL63 1104 aa8.63□□□□□ -1.03
USP8-213ENST00000560885 U2SURPO15042 1029 aaKnown RBP8.63□□□□□ -1.03
USP8-213ENST00000560885 ALDH1B1P30837 517 aa8.63□□□□□ -1.03
USP8-213ENST00000560885 FOSBP53539 338 aa8.63□□□□□ -1.03
USP8-213ENST00000560885 EAPPQ56P03 285 aaPredicted RBP8.63□□□□□ -1.03
USP8-213ENST00000560885 TPTE2Q6XPS3 522 aa8.63□□□□□ -1.03
USP8-213ENST00000560885 RTKN2Q8IZC4 609 aa8.63□□□□□ -1.03
USP8-213ENST00000560885 NPC1L1Q9UHC9 1359 aa8.62□□□□□ -1.03
USP8-213ENST00000560885 KIF7Q2M1P5 1343 aa8.62□□□□□ -1.03
USP8-213ENST00000560885 FZD9O00144 591 aa8.62□□□□□ -1.03
USP8-213ENST00000560885 EPHX2P34913 555 aa8.62□□□□□ -1.03
USP8-213ENST00000560885 MAP2K1Q02750 393 aaPredicted RBP8.62□□□□□ -1.03
USP8-213ENST00000560885 DEFB115Q30KQ5 88 aa8.62□□□□□ -1.03
USP8-213ENST00000560885 CC2D1BQ5T0F9 858 aaKnown RBP8.62□□□□□ -1.03
USP8-213ENST00000560885 GPC2Q8N158 579 aa8.62□□□□□ -1.03
USP8-213ENST00000560885 PCGF6Q9BYE7 350 aa8.62□□□□□ -1.03
USP8-213ENST00000560885 ZNF277Q9NRM2 450 aaPredicted RBP8.62□□□□□ -1.03
USP8-213ENST00000560885 USP16Q9Y5T5 823 aa8.62□□□□□ -1.03
USP8-213ENST00000560885 ZNF541Q9H0D2 1346 aa8.61□□□□□ -1.03
USP8-213ENST00000560885 SNRPA1P09661 255 aaKnown RBP8.61□□□□□ -1.03
USP8-213ENST00000560885 IARSP41252 1262 aaKnown RBP8.61□□□□□ -1.03
USP8-213ENST00000560885 LBX1P52954 281 aa8.61□□□□□ -1.03
USP8-213ENST00000560885 CNTROBQ8N137 903 aa8.61□□□□□ -1.03
USP8-213ENST00000560885 PSMD1Q99460 953 aa8.61□□□□□ -1.03
USP8-213ENST00000560885 RNF123Q5XPI4 1314 aa8.6□□□□□ -1.03
USP8-213ENST00000560885 WDR33Q9C0J8 1336 aaKnown RBP8.6□□□□□ -1.03
USP8-213ENST00000560885 KCNQ3O43525 872 aa8.6□□□□□ -1.03
USP8-213ENST00000560885 PIP4K2AP48426 406 aaPredicted RBP8.6□□□□□ -1.03
USP8-213ENST00000560885 MAP1SQ66K74 1059 aaPredicted RBP8.6□□□□□ -1.03
USP8-213ENST00000560885 NYAP1Q6ZVC0 841 aa8.6□□□□□ -1.03
USP8-213ENST00000560885 SYNE4Q8N205 404 aa8.6□□□□□ -1.03
USP8-213ENST00000560885 JDP2Q8WYK2 163 aa8.6□□□□□ -1.03
USP8-213ENST00000560885 PHACTR3Q96KR7 559 aa8.6□□□□□ -1.03
USP8-213ENST00000560885 NIP7Q9Y221 180 aaKnown RBP eCLIP8.6□□□□□ -1.03
USP8-213ENST00000560885 SNED1Q8TER0 1413 aa8.6□□□□□ -1.03
USP8-213ENST00000560885 DLG5Q8TDM6 1919 aa8.6□□□□□ -1.03
USP8-213ENST00000560885 LTBP1Q14766 1721 aa8.6□□□□□ -1.03
USP8-213ENST00000560885 PRAMEF22A3QJZ6 481 aa8.59□□□□□ -1.03
USP8-213ENST00000560885 HSPA8P11142 646 aaKnown RBP8.59□□□□□ -1.03
USP8-213ENST00000560885 GTF2E1P29083 439 aaPredicted RBP8.59□□□□□ -1.03
USP8-213ENST00000560885 CRY2Q49AN0 593 aa8.59□□□□□ -1.03
USP8-213ENST00000560885 GRIPAP1Q4V328 841 aa8.59□□□□□ -1.03
USP8-213ENST00000560885 CC2D2BQ6DHV5 1058 aa8.59□□□□□ -1.03
USP8-213ENST00000560885 OLFM4Q6UX06 510 aa8.59□□□□□ -1.03
USP8-213ENST00000560885 RTF1Q92541 710 aaKnown RBP8.59□□□□□ -1.03
USP8-213ENST00000560885 ABHD8Q96I13 439 aa8.59□□□□□ -1.03
USP8-213ENST00000560885 NYXQ9GZU5 481 aa8.59□□□□□ -1.03
USP8-213ENST00000560885 RSPH6AQ9H0K4 717 aa8.59□□□□□ -1.03
USP8-213ENST00000560885 DDX21Q9NR30 783 aaKnown RBP eCLIP8.59□□□□□ -1.03
USP8-213ENST00000560885 RIC1Q4ADV7 1423 aa8.59□□□□□ -1.03
USP8-213ENST00000560885 KDM3BQ7LBC6 1761 aa8.58□□□□□ -1.04
USP8-213ENST00000560885 NBPF26B4DH59 902 aa8.58□□□□□ -1.04
USP8-213ENST00000560885 LMOD1P29536 600 aaPredicted RBP8.58□□□□□ -1.04
USP8-213ENST00000560885 PRKAR2BP31323 418 aa8.58□□□□□ -1.04
USP8-213ENST00000560885 EIF6P56537 245 aaKnown RBP8.58□□□□□ -1.04
USP8-213ENST00000560885 LAPTM4AQ15012 233 aa8.58□□□□□ -1.04
USP8-213ENST00000560885 NBPF10Q6P3W6 841 aaKnown RBP8.58□□□□□ -1.04
USP8-213ENST00000560885 NBPF15Q8N660 670 aa8.58□□□□□ -1.04
USP8-213ENST00000560885 CFAP53Q96M91 514 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms