RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 SF3B3Q15393 1217 aaKnown RBP21.08■□□□□ 0.96
RPL28-211ENST00000560881 C9orf78Q9NZ63 289 aaPredicted RBP21.08■□□□□ 0.96
RPL28-211ENST00000560881 IPO8O15397 1037 aaKnown RBP21.07■□□□□ 0.96
RPL28-211ENST00000560881 ZKSCAN2Q63HK3 967 aa21.07■□□□□ 0.96
RPL28-211ENST00000560881 CHD4Q14839 1912 aa21.06■□□□□ 0.96
RPL28-211ENST00000560881 GRIN3BO60391 1043 aa21.06■□□□□ 0.96
RPL28-211ENST00000560881 SEC31BQ9NQW1 1179 aa21.06■□□□□ 0.96
RPL28-211ENST00000560881 FER1L6Q2WGJ9 1857 aa21.06■□□□□ 0.96
RPL28-211ENST00000560881 ALDH1B1P30837 517 aa21.05■□□□□ 0.96
RPL28-211ENST00000560881 CCT4P50991 539 aaKnown RBP21.05■□□□□ 0.96
RPL28-211ENST00000560881 ARHGAP27Q6ZUM4 889 aa21.05■□□□□ 0.96
RPL28-211ENST00000560881 DDX46Q7L014 1031 aaKnown RBP21.05■□□□□ 0.96
RPL28-211ENST00000560881 CRAMP1Q96RY5 1269 aa21.05■□□□□ 0.96
RPL28-211ENST00000560881 EPHA10Q5JZY3 1008 aa21.05■□□□□ 0.96
RPL28-211ENST00000560881 TTLL11Q8NHH1 800 aa21.05■□□□□ 0.96
RPL28-211ENST00000560881 C7orf43Q8WVR3 580 aa21.05■□□□□ 0.96
RPL28-211ENST00000560881 CELF1Q92879 486 aaKnown RBP21.05■□□□□ 0.96
RPL28-211ENST00000560881 SUCLG2Q96I99 432 aa21.05■□□□□ 0.96
RPL28-211ENST00000560881 USP44Q9H0E7 712 aa21.05■□□□□ 0.96
RPL28-211ENST00000560881 GTF3C3Q9Y5Q9 886 aa21.05■□□□□ 0.96
RPL28-211ENST00000560881 PPEF1O14829 653 aaPredicted RBP21.04■□□□□ 0.96
RPL28-211ENST00000560881 PLIN1O60240 522 aa21.04■□□□□ 0.96
RPL28-211ENST00000560881 RLBP1P12271 317 aa21.04■□□□□ 0.96
RPL28-211ENST00000560881 RASSF7Q02833 373 aa21.04■□□□□ 0.96
RPL28-211ENST00000560881 GREM2Q9H772 168 aa21.04■□□□□ 0.96
RPL28-211ENST00000560881 CCDC88AQ3V6T2 1871 aa21.04■□□□□ 0.96
RPL28-211ENST00000560881 HSP90B1P14625 803 aaKnown RBP21.03■□□□□ 0.96
RPL28-211ENST00000560881 FOXO4P98177 505 aa21.03■□□□□ 0.96
RPL28-211ENST00000560881 GRAPQ13588 217 aa21.03■□□□□ 0.96
RPL28-211ENST00000560881 CCDC152Q4G0S7 254 aa21.03■□□□□ 0.96
RPL28-211ENST00000560881 TMEM57Q8N5G2 664 aa21.03■□□□□ 0.96
RPL28-211ENST00000560881 GRAPLQ8TC17 118 aaPredicted RBP21.03■□□□□ 0.96
RPL28-211ENST00000560881 KAZALD1Q96I82 304 aa21.03■□□□□ 0.96
RPL28-211ENST00000560881 PLA2G12BQ9BX93 195 aa21.03■□□□□ 0.96
RPL28-211ENST00000560881 SBF1O95248 1867 aa21.03■□□□□ 0.96
RPL28-211ENST00000560881 UTYO14607 1347 aa21.03■□□□□ 0.96
RPL28-211ENST00000560881 FAM161AQ3B820 660 aa21.02■□□□□ 0.96
RPL28-211ENST00000560881 INTS3Q68E01 1043 aaKnown RBP21.02■□□□□ 0.96
RPL28-211ENST00000560881 NFKBIEO00221 500 aa21.02■□□□□ 0.95
RPL28-211ENST00000560881 MEIS3Q99687 375 aa21.02■□□□□ 0.95
RPL28-211ENST00000560881 FTSJ3Q8IY81 847 aaKnown RBP21.01■□□□□ 0.95
RPL28-211ENST00000560881 LRRC37AA6NMS7 1700 aa21.01■□□□□ 0.95
RPL28-211ENST00000560881 SNED1Q8TER0 1413 aa21■□□□□ 0.95
RPL28-211ENST00000560881 CSF1RP07333 972 aa20.99■□□□□ 0.95
RPL28-211ENST00000560881 PRELPP51888 382 aa20.99■□□□□ 0.95
RPL28-211ENST00000560881 LMBR1LQ6UX01 489 aa20.99■□□□□ 0.95
RPL28-211ENST00000560881 DZIP1LQ8IYY4 767 aaKnown RBP20.99■□□□□ 0.95
RPL28-211ENST00000560881 PANK1Q8TE04 598 aa20.99■□□□□ 0.95
RPL28-211ENST00000560881 BICC1Q9H694 974 aaKnown RBP20.99■□□□□ 0.95
RPL28-211ENST00000560881 CHMP3Q9Y3E7 222 aa20.99■□□□□ 0.95
RPL28-211ENST00000560881 CCDC93Q567U6 631 aa20.99■□□□□ 0.95
RPL28-211ENST00000560881 ITGA6P23229 1130 aa20.98■□□□□ 0.95
RPL28-211ENST00000560881 ATP6V0A2Q9Y487 856 aa20.98■□□□□ 0.95
RPL28-211ENST00000560881 BBOX1O75936 387 aa20.97■□□□□ 0.95
RPL28-211ENST00000560881 RTL9Q8NET4 1388 aa20.97■□□□□ 0.95
RPL28-211ENST00000560881 UBTFL1P0CB47 393 aaPredicted RBP20.96■□□□□ 0.95
RPL28-211ENST00000560881 RPS8P62241 208 aaKnown RBP20.96■□□□□ 0.95
RPL28-211ENST00000560881 ITPRIPQ8IWB1 547 aa20.96■□□□□ 0.95
RPL28-211ENST00000560881 ANKRD44Q8N8A2 993 aa20.96■□□□□ 0.95
RPL28-211ENST00000560881 SOGA3Q5TF21 947 aa20.96■□□□□ 0.95
RPL28-211ENST00000560881 DUOX1Q9NRD9 1551 aa20.95■□□□□ 0.94
RPL28-211ENST00000560881 C20orf194Q5TEA3 1177 aa20.95■□□□□ 0.94
RPL28-211ENST00000560881 ANKRD18AQ8IVF6 992 aa20.95■□□□□ 0.94
RPL28-211ENST00000560881 TAOK3Q9H2K8 898 aa20.95■□□□□ 0.94
RPL28-211ENST00000560881 LRRFIP2Q9Y608 721 aaKnown RBP20.95■□□□□ 0.94
RPL28-211ENST00000560881 LTBP1Q14766 1721 aa20.95■□□□□ 0.94
RPL28-211ENST00000560881 TIAM2Q8IVF5 1701 aa20.94■□□□□ 0.94
RPL28-211ENST00000560881 RABL6Q3YEC7 729 aaPredicted RBP20.94■□□□□ 0.94
RPL28-211ENST00000560881 SP8Q8IXZ3 490 aa20.94■□□□□ 0.94
RPL28-211ENST00000560881 CDC5LQ99459 802 aaKnown RBP20.94■□□□□ 0.94
RPL28-211ENST00000560881 ZNF594Q96JF6 807 aaPredicted RBP20.93■□□□□ 0.94
RPL28-211ENST00000560881 ZNF277Q9NRM2 450 aaPredicted RBP20.93■□□□□ 0.94
RPL28-211ENST00000560881 DICER1Q9UPY3 1922 aaKnown RBP20.93■□□□□ 0.94
RPL28-211ENST00000560881 ANKRD18BA2A2Z9 1011 aa20.93■□□□□ 0.94
RPL28-211ENST00000560881 FKBP4Q02790 459 aaKnown RBP eCLIP20.93■□□□□ 0.94
RPL28-211ENST00000560881 IFIT5Q13325 482 aaKnown RBP20.93■□□□□ 0.94
RPL28-211ENST00000560881 C9orf131Q5VYM1 1079 aa20.93■□□□□ 0.94
RPL28-211ENST00000560881 RTKN2Q8IZC4 609 aa20.93■□□□□ 0.94
RPL28-211ENST00000560881 RNF181Q9P0P0 153 aa20.93■□□□□ 0.94
RPL28-211ENST00000560881 A0A1B0GUL6 1792 aa20.93■□□□□ 0.94
RPL28-211ENST00000560881 COG6Q9Y2V7 657 aa20.92■□□□□ 0.94
RPL28-211ENST00000560881 LTBP3Q9NS15 1303 aa20.91■□□□□ 0.94
RPL28-211ENST00000560881 GPSM2P81274 684 aa20.91■□□□□ 0.94
RPL28-211ENST00000560881 CCDC57Q2TAC2 916 aa20.91■□□□□ 0.94
RPL28-211ENST00000560881 CC2D2BQ6DHV5 1058 aa20.91■□□□□ 0.94
RPL28-211ENST00000560881 COL4A5P29400 1685 aa20.91■□□□□ 0.94
RPL28-211ENST00000560881 GNAI3P08754 354 aa20.9■□□□□ 0.94
RPL28-211ENST00000560881 LMNB1P20700 586 aa20.9■□□□□ 0.94
RPL28-211ENST00000560881 IGHMBP2P38935 993 aaKnown RBP20.9■□□□□ 0.94
RPL28-211ENST00000560881 TMC4Q7Z404 712 aa20.9■□□□□ 0.94
RPL28-211ENST00000560881 KLHDC4Q8TBB5 520 aa20.9■□□□□ 0.94
RPL28-211ENST00000560881 TMX4Q9H1E5 349 aaPredicted RBP20.9■□□□□ 0.94
RPL28-211ENST00000560881 C1orf115Q9H7X2 142 aa20.9■□□□□ 0.94
RPL28-211ENST00000560881 DPP8Q6V1X1 898 aaPredicted RBP20.89■□□□□ 0.94
RPL28-211ENST00000560881 MPNDQ8N594 471 aa20.89■□□□□ 0.94
RPL28-211ENST00000560881 NSFL1CQ9UNZ2 370 aaKnown RBP20.89■□□□□ 0.94
RPL28-211ENST00000560881 YY1P25490 414 aa20.89■□□□□ 0.93
RPL28-211ENST00000560881 TAF7LQ5H9L4 462 aa20.89■□□□□ 0.93
RPL28-211ENST00000560881 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.89■□□□□ 0.93
RPL28-211ENST00000560881 GPR101Q96P66 508 aaPredicted RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms