RNA–Protein interactions for RNA: ENST00000560869.5

TNFAIP2-209, Transcript of TNF alpha induced protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP2, Length 4,683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-209ENST00000560869 CTCFLQ8NI51 663 aaPredicted RBP23.48■■□□□ 1.35
TNFAIP2-209ENST00000560869 GBP3Q9H0R5 595 aa23.48■■□□□ 1.35
TNFAIP2-209ENST00000560869 METAP2P50579 478 aaKnown RBP eCLIP23.48■■□□□ 1.35
TNFAIP2-209ENST00000560869 HS1BP3Q53T59 392 aa23.48■■□□□ 1.35
TNFAIP2-209ENST00000560869 CCDC12Q8WUD4 166 aaPredicted RBP23.48■■□□□ 1.35
TNFAIP2-209ENST00000560869 INTS4Q96HW7 963 aaKnown RBP23.47■■□□□ 1.35
TNFAIP2-209ENST00000560869 LMBR1LQ6UX01 489 aa23.47■■□□□ 1.35
TNFAIP2-209ENST00000560869 SPA17Q15506 151 aa23.47■■□□□ 1.35
TNFAIP2-209ENST00000560869 TMOD3Q9NYL9 352 aa23.47■■□□□ 1.35
TNFAIP2-209ENST00000560869 NPHP3Q7Z494 1330 aa23.46■■□□□ 1.35
TNFAIP2-209ENST00000560869 ERLIN2O94905 339 aa23.46■■□□□ 1.35
TNFAIP2-209ENST00000560869 BMS1Q14692 1282 aaKnown RBP23.46■■□□□ 1.35
TNFAIP2-209ENST00000560869 IQCEQ6IPM2 695 aa23.46■■□□□ 1.35
TNFAIP2-209ENST00000560869 IQCA1Q86XH1 822 aa23.46■■□□□ 1.35
TNFAIP2-209ENST00000560869 NCOA7Q8NI08 942 aa23.46■■□□□ 1.35
TNFAIP2-209ENST00000560869 MRPS27Q92552 414 aaKnown RBP23.46■■□□□ 1.35
TNFAIP2-209ENST00000560869 ABCA5Q8WWZ7 1642 aa23.46■■□□□ 1.35
TNFAIP2-209ENST00000560869 IBSPP21815 317 aaPredicted RBP23.45■■□□□ 1.35
TNFAIP2-209ENST00000560869 CREB3L3Q68CJ9 461 aa23.45■■□□□ 1.35
TNFAIP2-209ENST00000560869 LMAN1P49257 510 aa23.44■■□□□ 1.34
TNFAIP2-209ENST00000560869 MKNK2Q9HBH9 465 aa23.44■■□□□ 1.34
TNFAIP2-209ENST00000560869 CALCOCO1Q9P1Z2 691 aa23.44■■□□□ 1.34
TNFAIP2-209ENST00000560869 TOM1O60784 492 aa23.44■■□□□ 1.34
TNFAIP2-209ENST00000560869 ZNF397Q8NF99 534 aaPredicted RBP23.44■■□□□ 1.34
TNFAIP2-209ENST00000560869 KCNA6P17658 529 aa23.44■■□□□ 1.34
TNFAIP2-209ENST00000560869 KRT222Q8N1A0 295 aa23.44■■□□□ 1.34
TNFAIP2-209ENST00000560869 CWC25Q9NXE8 425 aaPredicted RBP23.44■■□□□ 1.34
TNFAIP2-209ENST00000560869 SOS1Q07889 1333 aaPredicted RBP23.44■■□□□ 1.34
TNFAIP2-209ENST00000560869 TAF4BQ92750 862 aa23.44■■□□□ 1.34
TNFAIP2-209ENST00000560869 LIG1P18858 919 aa23.43■■□□□ 1.34
TNFAIP2-209ENST00000560869 NLRP5P59047 1200 aa23.43■■□□□ 1.34
TNFAIP2-209ENST00000560869 KSR2Q6VAB6 950 aa23.43■■□□□ 1.34
TNFAIP2-209ENST00000560869 ANKRD24Q8TF21 1146 aa23.43■■□□□ 1.34
TNFAIP2-209ENST00000560869 CHAMP1Q96JM3 812 aa23.43■■□□□ 1.34
TNFAIP2-209ENST00000560869 PPIP5K1Q6PFW1 1433 aa23.43■■□□□ 1.34
TNFAIP2-209ENST00000560869 CCDC171Q6TFL3 1326 aa23.43■■□□□ 1.34
TNFAIP2-209ENST00000560869 MCMDC2Q4G0Z9 681 aa23.43■■□□□ 1.34
TNFAIP2-209ENST00000560869 CACNA2D4Q7Z3S7 1137 aa23.43■■□□□ 1.34
TNFAIP2-209ENST00000560869 NEFHP12036 1026 aa23.42■■□□□ 1.34
TNFAIP2-209ENST00000560869 SLC4A8Q2Y0W8 1093 aa23.42■■□□□ 1.34
TNFAIP2-209ENST00000560869 CCDC150Q8NCX0 1101 aa23.42■■□□□ 1.34
TNFAIP2-209ENST00000560869 PLCD4Q9BRC7 762 aa23.42■■□□□ 1.34
TNFAIP2-209ENST00000560869 ZMYM4Q5VZL5 1548 aa23.42■■□□□ 1.34
TNFAIP2-209ENST00000560869 ANKRD18BA2A2Z9 1011 aa23.42■■□□□ 1.34
TNFAIP2-209ENST00000560869 EXOC5O00471 708 aa23.42■■□□□ 1.34
TNFAIP2-209ENST00000560869 AFMP43652 599 aa23.42■■□□□ 1.34
TNFAIP2-209ENST00000560869 EYA1Q99502 592 aa23.42■■□□□ 1.34
TNFAIP2-209ENST00000560869 ALG1Q9BT22 464 aa23.42■■□□□ 1.34
TNFAIP2-209ENST00000560869 APOBRQ0VD83 1088 aa23.42■■□□□ 1.34
TNFAIP2-209ENST00000560869 GADD45BO75293 160 aaPredicted RBP23.42■■□□□ 1.34
TNFAIP2-209ENST00000560869 LRRC59Q96AG4 307 aaKnown RBP23.42■■□□□ 1.34
TNFAIP2-209ENST00000560869 ZSCAN29Q8IWY8 852 aaPredicted RBP23.41■■□□□ 1.34
TNFAIP2-209ENST00000560869 PBRM1Q86U86 1689 aa23.41■■□□□ 1.34
TNFAIP2-209ENST00000560869 N4BP3O15049 544 aa23.41■■□□□ 1.34
TNFAIP2-209ENST00000560869 TDRD12Q587J7 1177 aaKnown RBP23.41■■□□□ 1.34
TNFAIP2-209ENST00000560869 LMBRD1Q9NUN5 540 aa23.41■■□□□ 1.34
TNFAIP2-209ENST00000560869 KAT6BQ8WYB5 2073 aa23.41■■□□□ 1.34
TNFAIP2-209ENST00000560869 ARHGEF12Q9NZN5 1544 aa23.41■■□□□ 1.34
TNFAIP2-209ENST00000560869 IFNL2Q8IZJ0 200 aa23.41■■□□□ 1.34
TNFAIP2-209ENST00000560869 UHRF1BP1Q6BDS2 1440 aa23.4■■□□□ 1.34
TNFAIP2-209ENST00000560869 YEATS4O95619 227 aa23.4■■□□□ 1.34
TNFAIP2-209ENST00000560869 MCM6Q14566 821 aa23.4■■□□□ 1.34
TNFAIP2-209ENST00000560869 TXLNBQ8N3L3 684 aa23.4■■□□□ 1.34
TNFAIP2-209ENST00000560869 C19orf44Q9H6X5 657 aa23.4■■□□□ 1.34
TNFAIP2-209ENST00000560869 TMEM63CQ9P1W3 806 aa23.4■■□□□ 1.34
TNFAIP2-209ENST00000560869 CCDC194A0A1B0GVG4 234 aa23.4■■□□□ 1.34
TNFAIP2-209ENST00000560869 SNRPA1P09661 255 aaKnown RBP23.4■■□□□ 1.34
TNFAIP2-209ENST00000560869 FKBP15Q5T1M5 1219 aa23.4■■□□□ 1.34
TNFAIP2-209ENST00000560869 IDEP14735 1019 aa23.4■■□□□ 1.34
TNFAIP2-209ENST00000560869 MATR3P43243 847 aaKnown RBP eCLIP23.4■■□□□ 1.34
TNFAIP2-209ENST00000560869 PKP1Q13835 747 aa23.39■■□□□ 1.34
TNFAIP2-209ENST00000560869 KCNG4Q8TDN1 519 aa23.39■■□□□ 1.34
TNFAIP2-209ENST00000560869 SPATA31E1Q6ZUB1 1445 aa23.39■■□□□ 1.33
TNFAIP2-209ENST00000560869 IQSEC3Q9UPP2 1182 aaPredicted RBP23.39■■□□□ 1.33
TNFAIP2-209ENST00000560869 ALDH1L1O75891 902 aa23.39■■□□□ 1.33
TNFAIP2-209ENST00000560869 CAVIN4Q5BKX8 364 aa23.39■■□□□ 1.33
TNFAIP2-209ENST00000560869 LINS1Q8NG48 757 aa23.39■■□□□ 1.33
TNFAIP2-209ENST00000560869 GAS2L3Q86XJ1 694 aa23.38■■□□□ 1.33
TNFAIP2-209ENST00000560869 PNMA6EA0A0J9YXQ4 647 aa23.38■■□□□ 1.33
TNFAIP2-209ENST00000560869 MTIF2P46199 727 aaKnown RBP23.38■■□□□ 1.33
TNFAIP2-209ENST00000560869 RBM5P52756 815 aaKnown RBP eCLIP23.38■■□□□ 1.33
TNFAIP2-209ENST00000560869 MAP9Q49MG5 647 aa23.38■■□□□ 1.33
TNFAIP2-209ENST00000560869 MFSD6Q6ZSS7 791 aa23.38■■□□□ 1.33
TNFAIP2-209ENST00000560869 SMARCC1Q92922 1105 aaPredicted RBP23.38■■□□□ 1.33
TNFAIP2-209ENST00000560869 RNF41Q9H4P4 317 aaPredicted RBP23.38■■□□□ 1.33
TNFAIP2-209ENST00000560869 SLC5A1P13866 664 aa23.38■■□□□ 1.33
TNFAIP2-209ENST00000560869 RUFY3Q7L099 469 aa23.38■■□□□ 1.33
TNFAIP2-209ENST00000560869 TSC1Q92574 1164 aa23.38■■□□□ 1.33
TNFAIP2-209ENST00000560869 SPTLC2O15270 562 aa23.37■■□□□ 1.33
TNFAIP2-209ENST00000560869 ZBTB43O43298 467 aa23.37■■□□□ 1.33
TNFAIP2-209ENST00000560869 SLU7O95391 586 aaKnown RBP23.37■■□□□ 1.33
TNFAIP2-209ENST00000560869 CATIPQ7Z7H3 387 aa23.37■■□□□ 1.33
TNFAIP2-209ENST00000560869 IFNKQ9P0W0 207 aa23.37■■□□□ 1.33
TNFAIP2-209ENST00000560869 ZNF445P59923 1031 aa23.37■■□□□ 1.33
TNFAIP2-209ENST00000560869 PAFAH1B1P43034 410 aa23.36■■□□□ 1.33
TNFAIP2-209ENST00000560869 PTPDC1A2A3K4 754 aa23.36■■□□□ 1.33
TNFAIP2-209ENST00000560869 TTC41PQ6P2S7 1318 aa23.36■■□□□ 1.33
TNFAIP2-209ENST00000560869 UBA5Q9GZZ9 404 aa23.36■■□□□ 1.33
TNFAIP2-209ENST00000560869 TBX22Q9Y458 520 aa23.36■■□□□ 1.33
TNFAIP2-209ENST00000560869 SBNO2Q9Y2G9 1366 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms