RNA–Protein interactions for RNA: ENST00000560814.1

NDUFA3P4-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3 pseudogene 4, humanhuman

BASIC

Gene NDUFA3P4, Length 250 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3P4-201ENST00000560814 H0YIN7 160 aa9.14□□□□□ -0.95
NDUFA3P4-201ENST00000560814 EPHA10Q5JZY3 1008 aa9.14□□□□□ -0.95
NDUFA3P4-201ENST00000560814 STYK1Q6J9G0 422 aa9.14□□□□□ -0.95
NDUFA3P4-201ENST00000560814 KAZALD1Q96I82 304 aa9.14□□□□□ -0.95
NDUFA3P4-201ENST00000560814 SUCLG2Q96I99 432 aa9.14□□□□□ -0.95
NDUFA3P4-201ENST00000560814 USP44Q9H0E7 712 aa9.14□□□□□ -0.95
NDUFA3P4-201ENST00000560814 C9orf78Q9NZ63 289 aaPredicted RBP9.14□□□□□ -0.95
NDUFA3P4-201ENST00000560814 PDE8AO60658 829 aa9.13□□□□□ -0.95
NDUFA3P4-201ENST00000560814 NPR1P16066 1061 aa9.13□□□□□ -0.95
NDUFA3P4-201ENST00000560814 YBX3P16989 372 aaKnown RBP eCLIP9.13□□□□□ -0.95
NDUFA3P4-201ENST00000560814 HOXA10P31260 410 aaPredicted RBP9.13□□□□□ -0.95
NDUFA3P4-201ENST00000560814 FAM161AQ3B820 660 aa9.13□□□□□ -0.95
NDUFA3P4-201ENST00000560814 PRPF40BQ6NWY9 871 aaKnown RBP9.13□□□□□ -0.95
NDUFA3P4-201ENST00000560814 ITPRIPQ8IWB1 547 aa9.13□□□□□ -0.95
NDUFA3P4-201ENST00000560814 ANKRD44Q8N8A2 993 aa9.13□□□□□ -0.95
NDUFA3P4-201ENST00000560814 RPGRQ92834 1020 aaKnown RBP9.13□□□□□ -0.95
NDUFA3P4-201ENST00000560814 MASTLQ96GX5 879 aa9.13□□□□□ -0.95
NDUFA3P4-201ENST00000560814 NLRP3Q96P20 1036 aa9.13□□□□□ -0.95
NDUFA3P4-201ENST00000560814 CCDC85AQ96PX6 553 aaPredicted RBP9.13□□□□□ -0.95
NDUFA3P4-201ENST00000560814 PLA2G12BQ9BX93 195 aa9.13□□□□□ -0.95
NDUFA3P4-201ENST00000560814 UTRNP46939 3433 aa9.12□□□□□ -0.95
NDUFA3P4-201ENST00000560814 UBTFL1P0CB47 393 aaPredicted RBP9.12□□□□□ -0.95
NDUFA3P4-201ENST00000560814 FOXO4P98177 505 aa9.12□□□□□ -0.95
NDUFA3P4-201ENST00000560814 SF3B3Q15393 1217 aaKnown RBP9.12□□□□□ -0.95
NDUFA3P4-201ENST00000560814 PELP1Q8IZL8 1130 aaKnown RBP9.12□□□□□ -0.95
NDUFA3P4-201ENST00000560814 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.12□□□□□ -0.95
NDUFA3P4-201ENST00000560814 ZNF622Q969S3 477 aaKnown RBP eCLIP9.12□□□□□ -0.95
NDUFA3P4-201ENST00000560814 BICC1Q9H694 974 aaKnown RBP9.12□□□□□ -0.95
NDUFA3P4-201ENST00000560814 GREM2Q9H772 168 aa9.12□□□□□ -0.95
NDUFA3P4-201ENST00000560814 PDZRN3Q9UPQ7 1066 aa9.12□□□□□ -0.95
NDUFA3P4-201ENST00000560814 HSP90B1P14625 803 aaKnown RBP9.11□□□□□ -0.95
NDUFA3P4-201ENST00000560814 MVPQ14764 893 aaKnown RBP9.11□□□□□ -0.95
NDUFA3P4-201ENST00000560814 CCDC152Q4G0S7 254 aa9.11□□□□□ -0.95
NDUFA3P4-201ENST00000560814 DALRD3Q5D0E6 543 aaKnown RBP9.11□□□□□ -0.95
NDUFA3P4-201ENST00000560814 OLFM4Q6UX06 510 aa9.11□□□□□ -0.95
NDUFA3P4-201ENST00000560814 TTLL11Q8NHH1 800 aa9.11□□□□□ -0.95
NDUFA3P4-201ENST00000560814 CRAMP1Q96RY5 1269 aa9.11□□□□□ -0.95
NDUFA3P4-201ENST00000560814 C1orf115Q9H7X2 142 aa9.11□□□□□ -0.95
NDUFA3P4-201ENST00000560814 SEC31BQ9NQW1 1179 aa9.11□□□□□ -0.95
NDUFA3P4-201ENST00000560814 PIM2Q9P1W9 311 aa9.11□□□□□ -0.95
NDUFA3P4-201ENST00000560814 BCS1LQ9Y276 419 aa9.11□□□□□ -0.95
NDUFA3P4-201ENST00000560814 COG6Q9Y2V7 657 aa9.11□□□□□ -0.95
NDUFA3P4-201ENST00000560814 LRRFIP2Q9Y608 721 aaKnown RBP9.11□□□□□ -0.95
NDUFA3P4-201ENST00000560814 SBF1O95248 1867 aa9.11□□□□□ -0.95
NDUFA3P4-201ENST00000560814 PPEF1O14829 653 aaPredicted RBP9.1□□□□□ -0.95
NDUFA3P4-201ENST00000560814 CSF1RP07333 972 aa9.1□□□□□ -0.95
NDUFA3P4-201ENST00000560814 MS4A1P11836 297 aa9.1□□□□□ -0.95
NDUFA3P4-201ENST00000560814 KCNA4P22459 653 aa9.1□□□□□ -0.95
NDUFA3P4-201ENST00000560814 GRAPQ13588 217 aa9.1□□□□□ -0.95
NDUFA3P4-201ENST00000560814 PDE3AQ14432 1141 aa9.1□□□□□ -0.95
NDUFA3P4-201ENST00000560814 RABL6Q3YEC7 729 aaPredicted RBP9.1□□□□□ -0.95
NDUFA3P4-201ENST00000560814 LMBR1LQ6UX01 489 aa9.1□□□□□ -0.95
NDUFA3P4-201ENST00000560814 DDX46Q7L014 1031 aaKnown RBP9.1□□□□□ -0.95
NDUFA3P4-201ENST00000560814 TTLL6Q8N841 843 aa9.1□□□□□ -0.95
NDUFA3P4-201ENST00000560814 GRAPLQ8TC17 118 aaPredicted RBP9.1□□□□□ -0.95
NDUFA3P4-201ENST00000560814 CELF1Q92879 486 aaKnown RBP9.1□□□□□ -0.95
NDUFA3P4-201ENST00000560814 CNKSR1Q969H4 720 aa9.1□□□□□ -0.95
NDUFA3P4-201ENST00000560814 RBM17Q96I25 401 aaKnown RBP9.1□□□□□ -0.95
NDUFA3P4-201ENST00000560814 ZNF219Q9P2Y4 722 aaPredicted RBP9.1□□□□□ -0.95
NDUFA3P4-201ENST00000560814 ARAP2Q8WZ64 1704 aa9.1□□□□□ -0.95
NDUFA3P4-201ENST00000560814 CCDC88AQ3V6T2 1871 aa9.1□□□□□ -0.95
NDUFA3P4-201ENST00000560814 DICER1Q9UPY3 1922 aaKnown RBP9.09□□□□□ -0.95
NDUFA3P4-201ENST00000560814 DCAF8L1A6NGE4 600 aa9.09□□□□□ -0.95
NDUFA3P4-201ENST00000560814 GNAI3P08754 354 aa9.09□□□□□ -0.95
NDUFA3P4-201ENST00000560814 C7orf43Q8WVR3 580 aa9.09□□□□□ -0.95
NDUFA3P4-201ENST00000560814 DDX19BQ9UMR2 479 aa9.09□□□□□ -0.95
NDUFA3P4-201ENST00000560814 CHMP3Q9Y3E7 222 aa9.09□□□□□ -0.95
NDUFA3P4-201ENST00000560814 COL4A5P29400 1685 aa9.09□□□□□ -0.95
NDUFA3P4-201ENST00000560814 CHD4Q14839 1912 aa9.09□□□□□ -0.95
NDUFA3P4-201ENST00000560814 NFKBIEO00221 500 aa9.08□□□□□ -0.96
NDUFA3P4-201ENST00000560814 ZBTB7BO15156 539 aaPredicted RBP9.08□□□□□ -0.96
NDUFA3P4-201ENST00000560814 C21orf2O43822 256 aa9.08□□□□□ -0.96
NDUFA3P4-201ENST00000560814 GNAI2P04899 355 aa9.08□□□□□ -0.96
NDUFA3P4-201ENST00000560814 ITGA6P23229 1130 aa9.08□□□□□ -0.96
NDUFA3P4-201ENST00000560814 CRBNQ96SW2 442 aa9.08□□□□□ -0.96
NDUFA3P4-201ENST00000560814 SUPT16HQ9Y5B9 1047 aaKnown RBP9.08□□□□□ -0.96
NDUFA3P4-201ENST00000560814 ALDH1B1P30837 517 aa9.07□□□□□ -0.96
NDUFA3P4-201ENST00000560814 RFX5P48382 616 aaPredicted RBP9.07□□□□□ -0.96
NDUFA3P4-201ENST00000560814 RASSF7Q02833 373 aa9.07□□□□□ -0.96
NDUFA3P4-201ENST00000560814 MTX1Q13505 466 aa9.07□□□□□ -0.96
NDUFA3P4-201ENST00000560814 GPR162Q16538 588 aa9.07□□□□□ -0.96
NDUFA3P4-201ENST00000560814 CCDC93Q567U6 631 aa9.07□□□□□ -0.96
NDUFA3P4-201ENST00000560814 ZNF594Q96JF6 807 aaPredicted RBP9.07□□□□□ -0.96
NDUFA3P4-201ENST00000560814 CDC5LQ99459 802 aaKnown RBP9.07□□□□□ -0.96
NDUFA3P4-201ENST00000560814 ATP6V0A2Q9Y487 856 aa9.07□□□□□ -0.96
NDUFA3P4-201ENST00000560814 ZNF646O15015 1829 aaPredicted RBP9.07□□□□□ -0.96
NDUFA3P4-201ENST00000560814 ANKRD18BA2A2Z9 1011 aa9.06□□□□□ -0.96
NDUFA3P4-201ENST00000560814 HOXD11P31277 338 aaPredicted RBP9.06□□□□□ -0.96
NDUFA3P4-201ENST00000560814 RPS8P62241 208 aaKnown RBP9.06□□□□□ -0.96
NDUFA3P4-201ENST00000560814 IFIT5Q13325 482 aaKnown RBP9.06□□□□□ -0.96
NDUFA3P4-201ENST00000560814 ANKRD18AQ8IVF6 992 aa9.06□□□□□ -0.96
NDUFA3P4-201ENST00000560814 KLHDC4Q8TBB5 520 aa9.06□□□□□ -0.96
NDUFA3P4-201ENST00000560814 ZBTB40Q9NUA8 1239 aa9.06□□□□□ -0.96
NDUFA3P4-201ENST00000560814 PSME4Q14997 1843 aa9.05□□□□□ -0.96
NDUFA3P4-201ENST00000560814 PNMA6EA0A0J9YXQ4 647 aa9.05□□□□□ -0.96
NDUFA3P4-201ENST00000560814 SRGAP3O43295 1099 aa9.05□□□□□ -0.96
NDUFA3P4-201ENST00000560814 BBOX1O75936 387 aa9.05□□□□□ -0.96
NDUFA3P4-201ENST00000560814 IGHMBP2P38935 993 aaKnown RBP9.05□□□□□ -0.96
NDUFA3P4-201ENST00000560814 PRELPP51888 382 aa9.05□□□□□ -0.96
NDUFA3P4-201ENST00000560814 IRX6P78412 446 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms