RNA–Protein interactions for RNA: ENST00000560779.5

RMDN3-210, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 3

Gene RMDN3, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-210ENST00000560779 SPEF2Q9C093 1822 aa17.06■□□□□ 0.32
RMDN3-210ENST00000560779 NFKBIEO00221 500 aa17.06■□□□□ 0.32
RMDN3-210ENST00000560779 PPEF1O14829 653 aaPredicted RBP17.06■□□□□ 0.32
RMDN3-210ENST00000560779 BBOX1O75936 387 aa17.06■□□□□ 0.32
RMDN3-210ENST00000560779 CASP7P55210 303 aa17.06■□□□□ 0.32
RMDN3-210ENST00000560779 GRAPQ13588 217 aa17.06■□□□□ 0.32
RMDN3-210ENST00000560779 CCDC152Q4G0S7 254 aa17.06■□□□□ 0.32
RMDN3-210ENST00000560779 SLC4A10Q6U841 1118 aa17.06■□□□□ 0.32
RMDN3-210ENST00000560779 GRAPLQ8TC17 118 aaPredicted RBP17.06■□□□□ 0.32
RMDN3-210ENST00000560779 ARHGAP45Q92619 1136 aa17.06■□□□□ 0.32
RMDN3-210ENST00000560779 API5Q9BZZ5 524 aaKnown RBP17.06■□□□□ 0.32
RMDN3-210ENST00000560779 RTL9Q8NET4 1388 aa17.05■□□□□ 0.32
RMDN3-210ENST00000560779 RTKN2Q8IZC4 609 aa17.05■□□□□ 0.32
RMDN3-210ENST00000560779 ZNF219Q9P2Y4 722 aaPredicted RBP17.05■□□□□ 0.32
RMDN3-210ENST00000560779 ZC3H4Q9UPT8 1303 aaKnown RBP17.04■□□□□ 0.32
RMDN3-210ENST00000560779 GRM8O00222 908 aa17.04■□□□□ 0.32
RMDN3-210ENST00000560779 LMNB1P20700 586 aa17.04■□□□□ 0.32
RMDN3-210ENST00000560779 CTSWP56202 376 aa17.04■□□□□ 0.32
RMDN3-210ENST00000560779 RASSF7Q02833 373 aa17.04■□□□□ 0.32
RMDN3-210ENST00000560779 TAOK3Q9H2K8 898 aa17.04■□□□□ 0.32
RMDN3-210ENST00000560779 NOB1Q9ULX3 412 aaKnown RBP17.04■□□□□ 0.32
RMDN3-210ENST00000560779 UTYO14607 1347 aa17.03■□□□□ 0.32
RMDN3-210ENST00000560779 IPO8O15397 1037 aaKnown RBP17.03■□□□□ 0.32
RMDN3-210ENST00000560779 JARID2Q92833 1246 aaPredicted RBP17.03■□□□□ 0.32
RMDN3-210ENST00000560779 TMX4Q9H1E5 349 aaPredicted RBP17.03■□□□□ 0.32
RMDN3-210ENST00000560779 ATP6V0A2Q9Y487 856 aa17.03■□□□□ 0.32
RMDN3-210ENST00000560779 LTBP1Q14766 1721 aa17.03■□□□□ 0.32
RMDN3-210ENST00000560779 COL4A1P02462 1669 aa17.03■□□□□ 0.32
RMDN3-210ENST00000560779 CCT4P50991 539 aaKnown RBP17.02■□□□□ 0.32
RMDN3-210ENST00000560779 FKBP4Q02790 459 aaKnown RBP eCLIP17.02■□□□□ 0.32
RMDN3-210ENST00000560779 C9orf131Q5VYM1 1079 aa17.02■□□□□ 0.32
RMDN3-210ENST00000560779 SP8Q8IXZ3 490 aa17.02■□□□□ 0.32
RMDN3-210ENST00000560779 TTLL11Q8NHH1 800 aa17.02■□□□□ 0.32
RMDN3-210ENST00000560779 PSMD1Q99460 953 aa17.02■□□□□ 0.32
RMDN3-210ENST00000560779 C9orf78Q9NZ63 289 aaPredicted RBP17.02■□□□□ 0.32
RMDN3-210ENST00000560779 RNF181Q9P0P0 153 aa17.01■□□□□ 0.31
RMDN3-210ENST00000560779 CSF1RP07333 972 aa17■□□□□ 0.31
RMDN3-210ENST00000560779 RPS8P62241 208 aaKnown RBP17■□□□□ 0.31
RMDN3-210ENST00000560779 OLFM4Q6UX06 510 aa17■□□□□ 0.31
RMDN3-210ENST00000560779 CELF1Q92879 486 aaKnown RBP17■□□□□ 0.31
RMDN3-210ENST00000560779 CDC5LQ99459 802 aaKnown RBP17■□□□□ 0.31
RMDN3-210ENST00000560779 A0A1B0GUL6 1792 aa17■□□□□ 0.31
RMDN3-210ENST00000560779 BCAR3O75815 825 aa16.99■□□□□ 0.31
RMDN3-210ENST00000560779 PRELPP51888 382 aa16.99■□□□□ 0.31
RMDN3-210ENST00000560779 SEC31BQ9NQW1 1179 aa16.99■□□□□ 0.31
RMDN3-210ENST00000560779 DUOX1Q9NRD9 1551 aa16.98■□□□□ 0.31
RMDN3-210ENST00000560779 ATF7IPQ6VMQ6 1270 aa16.98■□□□□ 0.31
RMDN3-210ENST00000560779 VPS33BQ9H267 617 aa16.98■□□□□ 0.31
RMDN3-210ENST00000560779 GREM2Q9H772 168 aa16.98■□□□□ 0.31
RMDN3-210ENST00000560779 TRIM27P14373 513 aa16.97■□□□□ 0.31
RMDN3-210ENST00000560779 FOXO4P98177 505 aa16.97■□□□□ 0.31
RMDN3-210ENST00000560779 ZKSCAN2Q63HK3 967 aa16.97■□□□□ 0.31
RMDN3-210ENST00000560779 INTS3Q68E01 1043 aaKnown RBP16.97■□□□□ 0.31
RMDN3-210ENST00000560779 ANKRD18AQ8IVF6 992 aa16.97■□□□□ 0.31
RMDN3-210ENST00000560779 ZNF784Q8NCA9 323 aaPredicted RBP16.97■□□□□ 0.31
RMDN3-210ENST00000560779 SUPT20HQ8NEM7 779 aa16.97■□□□□ 0.31
RMDN3-210ENST00000560779 RTFDC1Q9BY42 306 aaPredicted RBP16.97■□□□□ 0.31
RMDN3-210ENST00000560779 USP44Q9H0E7 712 aa16.97■□□□□ 0.31
RMDN3-210ENST00000560779 NBPF7P0C2Y1 421 aaPredicted RBP16.96■□□□□ 0.31
RMDN3-210ENST00000560779 IARSP41252 1262 aaKnown RBP16.96■□□□□ 0.31
RMDN3-210ENST00000560779 MPNDQ8N594 471 aa16.96■□□□□ 0.31
RMDN3-210ENST00000560779 FRAT1Q92837 279 aaPredicted RBP16.96■□□□□ 0.31
RMDN3-210ENST00000560779 CCDC85AQ96PX6 553 aaPredicted RBP16.96■□□□□ 0.31
RMDN3-210ENST00000560779 ITGA6P23229 1130 aa16.95■□□□□ 0.3
RMDN3-210ENST00000560779 FAM161AQ3B820 660 aa16.95■□□□□ 0.3
RMDN3-210ENST00000560779 DPP8Q6V1X1 898 aaPredicted RBP16.95■□□□□ 0.3
RMDN3-210ENST00000560779 SUCLG2Q96I99 432 aa16.95■□□□□ 0.3
RMDN3-210ENST00000560779 HDAC5Q9UQL6 1122 aa16.95■□□□□ 0.3
RMDN3-210ENST00000560779 RABL6Q3YEC7 729 aaPredicted RBP16.94■□□□□ 0.3
RMDN3-210ENST00000560779 EPHA10Q5JZY3 1008 aa16.94■□□□□ 0.3
RMDN3-210ENST00000560779 LMBR1LQ6UX01 489 aa16.94■□□□□ 0.3
RMDN3-210ENST00000560779 SLC51AQ86UW1 340 aa16.94■□□□□ 0.3
RMDN3-210ENST00000560779 KAZALD1Q96I82 304 aa16.94■□□□□ 0.3
RMDN3-210ENST00000560779 ZNF277Q9NRM2 450 aaPredicted RBP16.94■□□□□ 0.3
RMDN3-210ENST00000560779 BSDC1Q9NW68 430 aaPredicted RBP16.94■□□□□ 0.3
RMDN3-210ENST00000560779 PODXL2Q9NZ53 605 aa16.94■□□□□ 0.3
RMDN3-210ENST00000560779 ANKRD18BA2A2Z9 1011 aa16.93■□□□□ 0.3
RMDN3-210ENST00000560779 IGHMBP2P38935 993 aaKnown RBP16.93■□□□□ 0.3
RMDN3-210ENST00000560779 IFIT5Q13325 482 aaKnown RBP16.93■□□□□ 0.3
RMDN3-210ENST00000560779 WDR90Q96KV7 1748 aa16.93■□□□□ 0.3
RMDN3-210ENST00000560779 SCN4AP35499 1836 aa16.92■□□□□ 0.3
RMDN3-210ENST00000560779 PSME4Q14997 1843 aa16.92■□□□□ 0.3
RMDN3-210ENST00000560779 UBTFL1P0CB47 393 aaPredicted RBP16.92■□□□□ 0.3
RMDN3-210ENST00000560779 NSFL1CQ9UNZ2 370 aaKnown RBP16.92■□□□□ 0.3
RMDN3-210ENST00000560779 XDHP47989 1333 aa16.92■□□□□ 0.3
RMDN3-210ENST00000560779 KDM2BQ8NHM5 1336 aa16.92■□□□□ 0.3
RMDN3-210ENST00000560779 COL4A5P29400 1685 aa16.91■□□□□ 0.3
RMDN3-210ENST00000560779 GPSM2P81274 684 aa16.91■□□□□ 0.3
RMDN3-210ENST00000560779 KIAA2012Q0VF49 1180 aa16.91■□□□□ 0.3
RMDN3-210ENST00000560779 CCDC57Q2TAC2 916 aa16.91■□□□□ 0.3
RMDN3-210ENST00000560779 JDP2Q8WYK2 163 aa16.91■□□□□ 0.3
RMDN3-210ENST00000560779 MPHOSPH8Q99549 860 aa16.91■□□□□ 0.3
RMDN3-210ENST00000560779 BICC1Q9H694 974 aaKnown RBP16.91■□□□□ 0.3
RMDN3-210ENST00000560779 GPBP1L1Q9HC44 474 aaPredicted RBP16.91■□□□□ 0.3
RMDN3-210ENST00000560779 RCAN3Q9UKA8 241 aa16.91■□□□□ 0.3
RMDN3-210ENST00000560779 CHMP3Q9Y3E7 222 aa16.91■□□□□ 0.3
RMDN3-210ENST00000560779 GLTPD2A6NH11 291 aa16.9■□□□□ 0.3
RMDN3-210ENST00000560779 PPIP5K2O43314 1243 aa16.9■□□□□ 0.3
RMDN3-210ENST00000560779 GNAI3P08754 354 aa16.9■□□□□ 0.3
RMDN3-210ENST00000560779 MS4A1P11836 297 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms