RNA–Protein interactions for RNA: ENST00000560631.1

RNF31-222, Transcript of ring finger protein 31, human

TSL 2

Gene RNF31, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-222	ENST00000560631	TTLL13P	A6NNM8	815 aa		10.25	□□□□□ -0.77
RNF31-222	ENST00000560631	ATP5J2-PTCD1	G3V325	749 aa		10.25	□□□□□ -0.77
RNF31-222	ENST00000560631	NPHP1	O15259	732 aa		10.25	□□□□□ -0.77
RNF31-222	ENST00000560631	PCCA	P05165	728 aa	Predicted RBP	10.25	□□□□□ -0.77
RNF31-222	ENST00000560631	IGKV5-2	P06315	115 aa		10.25	□□□□□ -0.77
RNF31-222	ENST00000560631	GTF2E1	P29083	439 aa	Predicted RBP	10.25	□□□□□ -0.77
RNF31-222	ENST00000560631	CHRNA5	P30532	468 aa		10.25	□□□□□ -0.77
RNF31-222	ENST00000560631	RARS	P54136	660 aa	Known RBP	10.25	□□□□□ -0.77
RNF31-222	ENST00000560631	CRY2	Q49AN0	593 aa		10.25	□□□□□ -0.77
RNF31-222	ENST00000560631	ERFE	Q4G0M1	354 aa		10.25	□□□□□ -0.77
RNF31-222	ENST00000560631	NUTM1	Q86Y26	1132 aa		10.25	□□□□□ -0.77
RNF31-222	ENST00000560631	C2CD5	Q86YS7	1000 aa		10.25	□□□□□ -0.77
RNF31-222	ENST00000560631	TTLL6	Q8N841	843 aa		10.25	□□□□□ -0.77
RNF31-222	ENST00000560631	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	10.25	□□□□□ -0.77
RNF31-222	ENST00000560631	MASTL	Q96GX5	879 aa		10.25	□□□□□ -0.77
RNF31-222	ENST00000560631	MYD88	Q99836	296 aa		10.25	□□□□□ -0.77
RNF31-222	ENST00000560631	TRMT112	Q9UI30	125 aa	Known RBP	10.25	□□□□□ -0.77
RNF31-222	ENST00000560631	PTPRC	P08575	1304 aa		10.25	□□□□□ -0.77
RNF31-222	ENST00000560631	SH3TC1	Q8TE82	1336 aa		10.25	□□□□□ -0.77
RNF31-222	ENST00000560631	ABCC12	Q96J65	1359 aa		10.25	□□□□□ -0.77
RNF31-222	ENST00000560631	UTRN	P46939	3433 aa		10.24	□□□□□ -0.77
RNF31-222	ENST00000560631	SBF1	O95248	1867 aa		10.24	□□□□□ -0.77
RNF31-222	ENST00000560631	CACNA1S	Q13698	1873 aa		10.24	□□□□□ -0.77
RNF31-222	ENST00000560631	FAM177B	A6PVY3	158 aa		10.24	□□□□□ -0.77
RNF31-222	ENST00000560631	HSP90B1	P14625	803 aa	Known RBP	10.24	□□□□□ -0.77
RNF31-222	ENST00000560631	NPR1	P16066	1061 aa		10.24	□□□□□ -0.77
RNF31-222	ENST00000560631	YBX3	P16989	372 aa	Known RBP eCLIP	10.24	□□□□□ -0.77
RNF31-222	ENST00000560631	NEXN	Q0ZGT2	675 aa		10.24	□□□□□ -0.77
RNF31-222	ENST00000560631	GPR162	Q16538	588 aa		10.24	□□□□□ -0.77
RNF31-222	ENST00000560631	CCDC24	Q8N4L8	307 aa		10.24	□□□□□ -0.77
RNF31-222	ENST00000560631	LINS1	Q8NG48	757 aa		10.24	□□□□□ -0.77
RNF31-222	ENST00000560631	CNKSR1	Q969H4	720 aa		10.24	□□□□□ -0.77
RNF31-222	ENST00000560631	CWC25	Q9NXE8	425 aa	Predicted RBP	10.24	□□□□□ -0.77
RNF31-222	ENST00000560631	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.24	□□□□□ -0.77
RNF31-222	ENST00000560631	TNRC6C	Q9HCJ0	1690 aa	Known RBP	10.23	□□□□□ -0.77
RNF31-222	ENST00000560631	NEURL1B	A8MQ27	555 aa		10.23	□□□□□ -0.77
RNF31-222	ENST00000560631		H7C1W4	665 aa		10.23	□□□□□ -0.77
RNF31-222	ENST00000560631	HOXA10	P31260	410 aa	Predicted RBP	10.23	□□□□□ -0.77
RNF31-222	ENST00000560631	DALRD3	Q5D0E6	543 aa	Known RBP	10.23	□□□□□ -0.77
RNF31-222	ENST00000560631	BEND3	Q5T5X7	828 aa		10.23	□□□□□ -0.77
RNF31-222	ENST00000560631	ARHGAP45	Q92619	1136 aa		10.23	□□□□□ -0.77
RNF31-222	ENST00000560631	NLRP3	Q96P20	1036 aa		10.23	□□□□□ -0.77
RNF31-222	ENST00000560631	CDHR2	Q9BYE9	1310 aa		10.23	□□□□□ -0.77
RNF31-222	ENST00000560631	FER1L6	Q2WGJ9	1857 aa		10.23	□□□□□ -0.77
RNF31-222	ENST00000560631	CCDC88A	Q3V6T2	1871 aa		10.23	□□□□□ -0.77
RNF31-222	ENST00000560631		F6X3S4	739 aa		10.22	□□□□□ -0.77
RNF31-222	ENST00000560631	ALDH1L1	O75891	902 aa		10.22	□□□□□ -0.77
RNF31-222	ENST00000560631	SEC24B	O95487	1268 aa		10.22	□□□□□ -0.77
RNF31-222	ENST00000560631	ALDH1B1	P30837	517 aa		10.22	□□□□□ -0.77
RNF31-222	ENST00000560631	SF3B3	Q15393	1217 aa	Known RBP	10.22	□□□□□ -0.77
RNF31-222	ENST00000560631	SYNE4	Q8N205	404 aa		10.22	□□□□□ -0.77
RNF31-222	ENST00000560631	FAM89A	Q96GI7	184 aa		10.22	□□□□□ -0.77
RNF31-222	ENST00000560631	CRAMP1	Q96RY5	1269 aa		10.22	□□□□□ -0.77
RNF31-222	ENST00000560631	SMC4	Q9NTJ3	1288 aa		10.22	□□□□□ -0.77
RNF31-222	ENST00000560631	TAF1	P21675	1872 aa		10.21	□□□□□ -0.77
RNF31-222	ENST00000560631	IRS4	O14654	1257 aa	Predicted RBP	10.21	□□□□□ -0.77
RNF31-222	ENST00000560631	PDE8A	O60658	829 aa		10.21	□□□□□ -0.77
RNF31-222	ENST00000560631	HCLS1	P14317	486 aa	Predicted RBP	10.21	□□□□□ -0.77
RNF31-222	ENST00000560631	CASP7	P55210	303 aa		10.21	□□□□□ -0.77
RNF31-222	ENST00000560631	GCKR	Q14397	625 aa		10.21	□□□□□ -0.77
RNF31-222	ENST00000560631	C7orf43	Q8WVR3	580 aa		10.21	□□□□□ -0.77
RNF31-222	ENST00000560631	ZNF622	Q969S3	477 aa	Known RBP eCLIP	10.21	□□□□□ -0.77
RNF31-222	ENST00000560631	PLA2G12B	Q9BX93	195 aa		10.21	□□□□□ -0.77
RNF31-222	ENST00000560631	COLQ	Q9Y215	455 aa	Predicted RBP	10.21	□□□□□ -0.77
RNF31-222	ENST00000560631	BCS1L	Q9Y276	419 aa		10.21	□□□□□ -0.77
RNF31-222	ENST00000560631	PCDHB13	Q9Y5F0	798 aa		10.21	□□□□□ -0.77
RNF31-222	ENST00000560631	DICER1	Q9UPY3	1922 aa	Known RBP	10.21	□□□□□ -0.78
RNF31-222	ENST00000560631	CWF19L2	Q2TBE0	894 aa	Known RBP	10.2	□□□□□ -0.78
RNF31-222	ENST00000560631	C3orf67	Q6ZVT6	689 aa		10.2	□□□□□ -0.78
RNF31-222	ENST00000560631	RBM17	Q96I25	401 aa	Known RBP	10.2	□□□□□ -0.78
RNF31-222	ENST00000560631	KIF16B	Q96L93	1317 aa		10.2	□□□□□ -0.78
RNF31-222	ENST00000560631	BCL2L13	Q9BXK5	485 aa		10.2	□□□□□ -0.78
RNF31-222	ENST00000560631	UTY	O14607	1347 aa		10.19	□□□□□ -0.78
RNF31-222	ENST00000560631	IPO8	O15397	1037 aa	Known RBP	10.19	□□□□□ -0.78
RNF31-222	ENST00000560631	SOGA3	Q5TF21	947 aa		10.19	□□□□□ -0.78
RNF31-222	ENST00000560631	CC2D2B	Q6DHV5	1058 aa		10.19	□□□□□ -0.78
RNF31-222	ENST00000560631	PRPF40B	Q6NWY9	871 aa	Known RBP	10.19	□□□□□ -0.78
RNF31-222	ENST00000560631	IFNL1	Q8IU54	200 aa		10.19	□□□□□ -0.78
RNF31-222	ENST00000560631	RPGR	Q92834	1020 aa	Known RBP	10.19	□□□□□ -0.78
RNF31-222	ENST00000560631	API5	Q9BZZ5	524 aa	Known RBP	10.19	□□□□□ -0.78
RNF31-222	ENST00000560631	SRCIN1	Q9C0H9	1055 aa		10.19	□□□□□ -0.78
RNF31-222	ENST00000560631	NOB1	Q9ULX3	412 aa	Known RBP	10.19	□□□□□ -0.78
RNF31-222	ENST00000560631	LTBP3	Q9NS15	1303 aa		10.18	□□□□□ -0.78
RNF31-222	ENST00000560631	BCAR3	O75815	825 aa		10.18	□□□□□ -0.78
RNF31-222	ENST00000560631	BBOX1	O75936	387 aa		10.18	□□□□□ -0.78
RNF31-222	ENST00000560631	GRIPAP1	Q4V328	841 aa		10.18	□□□□□ -0.78
RNF31-222	ENST00000560631	TMC4	Q7Z404	712 aa		10.18	□□□□□ -0.78
RNF31-222	ENST00000560631	SNED1	Q8TER0	1413 aa		10.17	□□□□□ -0.78
RNF31-222	ENST00000560631	RTL9	Q8NET4	1388 aa		10.17	□□□□□ -0.78
RNF31-222	ENST00000560631	GRM8	O00222	908 aa		10.17	□□□□□ -0.78
RNF31-222	ENST00000560631	CSF1R	P07333	972 aa		10.17	□□□□□ -0.78
RNF31-222	ENST00000560631	CTSW	P56202	376 aa		10.17	□□□□□ -0.78
RNF31-222	ENST00000560631	GRAP	Q13588	217 aa		10.17	□□□□□ -0.78
RNF31-222	ENST00000560631	CCDC152	Q4G0S7	254 aa		10.17	□□□□□ -0.78
RNF31-222	ENST00000560631	SLC4A10	Q6U841	1118 aa		10.17	□□□□□ -0.78
RNF31-222	ENST00000560631	DDX46	Q7L014	1031 aa	Known RBP	10.17	□□□□□ -0.78
RNF31-222	ENST00000560631	UBE3B	Q7Z3V4	1068 aa		10.17	□□□□□ -0.78
RNF31-222	ENST00000560631	TTLL11	Q8NHH1	800 aa		10.17	□□□□□ -0.78
RNF31-222	ENST00000560631	GRAPL	Q8TC17	118 aa	Predicted RBP	10.17	□□□□□ -0.78
RNF31-222	ENST00000560631	FAM212A	Q96EL1	285 aa		10.17	□□□□□ -0.78

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