RNA–Protein interactions for RNA: ENST00000560588.5

RMDN3-209, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,202 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-209ENST00000560588 SHANK3Q9BYB0 1731 aa12.34□□□□□ -0.43
RMDN3-209ENST00000560588 A0A0D9SFI3 127 aa12.34□□□□□ -0.43
RMDN3-209ENST00000560588 F13A1P00488 732 aa12.34□□□□□ -0.43
RMDN3-209ENST00000560588 SYT1P21579 422 aa12.34□□□□□ -0.43
RMDN3-209ENST00000560588 FOXO4P98177 505 aa12.34□□□□□ -0.43
RMDN3-209ENST00000560588 TMEM63CQ9P1W3 806 aa12.34□□□□□ -0.43
RMDN3-209ENST00000560588 ESPNB1AK53 854 aa12.33□□□□□ -0.44
RMDN3-209ENST00000560588 ATP5J2-PTCD1G3V325 749 aa12.33□□□□□ -0.44
RMDN3-209ENST00000560588 PTCD1O75127 700 aaKnown RBP12.33□□□□□ -0.44
RMDN3-209ENST00000560588 RPS6KB1P23443 525 aa12.33□□□□□ -0.44
RMDN3-209ENST00000560588 LMBR1LQ6UX01 489 aa12.33□□□□□ -0.44
RMDN3-209ENST00000560588 VSIG10Q8N0Z9 540 aa12.33□□□□□ -0.44
RMDN3-209ENST00000560588 KLHDC4Q8TBB5 520 aa12.33□□□□□ -0.44
RMDN3-209ENST00000560588 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.33□□□□□ -0.44
RMDN3-209ENST00000560588 NHSL1Q5SYE7 1610 aa12.33□□□□□ -0.44
RMDN3-209ENST00000560588 STRCQ7RTU9 1775 aa12.33□□□□□ -0.44
RMDN3-209ENST00000560588 PALLDQ8WX93 1383 aa12.33□□□□□ -0.44
RMDN3-209ENST00000560588 TAF5LO75529 589 aa12.33□□□□□ -0.44
RMDN3-209ENST00000560588 USP48Q86UV5 1035 aa12.33□□□□□ -0.44
RMDN3-209ENST00000560588 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.33□□□□□ -0.44
RMDN3-209ENST00000560588 SH3TC1Q8TE82 1336 aa12.32□□□□□ -0.44
RMDN3-209ENST00000560588 GJB2P29033 226 aa12.32□□□□□ -0.44
RMDN3-209ENST00000560588 EVA1CP58658 441 aa12.32□□□□□ -0.44
RMDN3-209ENST00000560588 UBE2HP62256 183 aa12.32□□□□□ -0.44
RMDN3-209ENST00000560588 TRIM28Q13263 835 aaKnown RBP12.32□□□□□ -0.44
RMDN3-209ENST00000560588 LRRFIP1Q32MZ4 808 aaKnown RBP12.32□□□□□ -0.44
RMDN3-209ENST00000560588 ADCK5Q3MIX3 580 aa12.32□□□□□ -0.44
RMDN3-209ENST00000560588 MCMDC2Q4G0Z9 681 aa12.32□□□□□ -0.44
RMDN3-209ENST00000560588 CCDC83Q8IWF9 413 aa12.32□□□□□ -0.44
RMDN3-209ENST00000560588 TSPY26PQ9H489 355 aa12.32□□□□□ -0.44
RMDN3-209ENST00000560588 HELLSQ9NRZ9 838 aa12.32□□□□□ -0.44
RMDN3-209ENST00000560588 RBM27Q9P2N5 1060 aaKnown RBP12.32□□□□□ -0.44
RMDN3-209ENST00000560588 PRIM1P49642 420 aaKnown RBP12.31□□□□□ -0.44
RMDN3-209ENST00000560588 CCDC183Q5T5S1 534 aa12.31□□□□□ -0.44
RMDN3-209ENST00000560588 KBTBD3Q8NAB2 608 aa12.31□□□□□ -0.44
RMDN3-209ENST00000560588 FAM184AQ8NB25 1140 aa12.31□□□□□ -0.44
RMDN3-209ENST00000560588 CHMP4CQ96CF2 233 aa12.31□□□□□ -0.44
RMDN3-209ENST00000560588 RBSNQ9H1K0 784 aa12.31□□□□□ -0.44
RMDN3-209ENST00000560588 HMGB1P09429 215 aaKnown RBP12.31□□□□□ -0.44
RMDN3-209ENST00000560588 HSPA2P54652 639 aa12.31□□□□□ -0.44
RMDN3-209ENST00000560588 DBNDD2Q9BQY9 259 aa12.31□□□□□ -0.44
RMDN3-209ENST00000560588 MTMR6Q9Y217 621 aa12.31□□□□□ -0.44
RMDN3-209ENST00000560588 SYCE3A1L190 88 aa12.3□□□□□ -0.44
RMDN3-209ENST00000560588 EYA2O00167 538 aa12.3□□□□□ -0.44
RMDN3-209ENST00000560588 PIP4K2AP48426 406 aaPredicted RBP12.3□□□□□ -0.44
RMDN3-209ENST00000560588 UVSSAQ2YD98 709 aa12.3□□□□□ -0.44
RMDN3-209ENST00000560588 TTLL7Q6ZT98 887 aa12.3□□□□□ -0.44
RMDN3-209ENST00000560588 ISCA1Q9BUE6 129 aa12.3□□□□□ -0.44
RMDN3-209ENST00000560588 DNAJC5Q9H3Z4 198 aa12.3□□□□□ -0.44
RMDN3-209ENST00000560588 TMOD3Q9NYL9 352 aa12.3□□□□□ -0.44
RMDN3-209ENST00000560588 CHMP3Q9Y3E7 222 aa12.3□□□□□ -0.44
RMDN3-209ENST00000560588 CPA1P15085 419 aa12.3□□□□□ -0.44
RMDN3-209ENST00000560588 ME3Q16798 604 aa12.3□□□□□ -0.44
RMDN3-209ENST00000560588 KIF6Q6ZMV9 814 aa12.3□□□□□ -0.44
RMDN3-209ENST00000560588 ATG9AQ7Z3C6 839 aa12.3□□□□□ -0.44
RMDN3-209ENST00000560588 PDLIM2Q96JY6 352 aa12.3□□□□□ -0.44
RMDN3-209ENST00000560588 PLA2G12BQ9BX93 195 aa12.3□□□□□ -0.44
RMDN3-209ENST00000560588 TPCN1Q9ULQ1 816 aa12.3□□□□□ -0.44
RMDN3-209ENST00000560588 ZNF609O15014 1411 aa12.29□□□□□ -0.44
RMDN3-209ENST00000560588 LARGE1O95461 756 aa12.29□□□□□ -0.44
RMDN3-209ENST00000560588 TCIRG1Q13488 830 aa12.29□□□□□ -0.44
RMDN3-209ENST00000560588 AKAP2Q9Y2D5 859 aa12.29□□□□□ -0.44
RMDN3-209ENST00000560588 TCHHQ07283 1943 aa12.29□□□□□ -0.44
RMDN3-209ENST00000560588 A1BGP04217 495 aa12.29□□□□□ -0.44
RMDN3-209ENST00000560588 ZNF589Q86UQ0 364 aaPredicted RBP12.29□□□□□ -0.44
RMDN3-209ENST00000560588 ZSCAN30Q86W11 494 aa12.29□□□□□ -0.44
RMDN3-209ENST00000560588 JARID2Q92833 1246 aaPredicted RBP12.29□□□□□ -0.44
RMDN3-209ENST00000560588 DNAJC2Q99543 621 aaKnown RBP12.29□□□□□ -0.44
RMDN3-209ENST00000560588 DSCC1Q9BVC3 393 aa12.29□□□□□ -0.44
RMDN3-209ENST00000560588 PAG1Q9NWQ8 432 aa12.29□□□□□ -0.44
RMDN3-209ENST00000560588 NSFL1CQ9UNZ2 370 aaKnown RBP12.29□□□□□ -0.44
RMDN3-209ENST00000560588 ABCC12Q96J65 1359 aa12.29□□□□□ -0.44
RMDN3-209ENST00000560588 LRP6O75581 1613 aa12.28□□□□□ -0.44
RMDN3-209ENST00000560588 TOGARAM1Q9Y4F4 1720 aa12.28□□□□□ -0.44
RMDN3-209ENST00000560588 STARD3NLO95772 234 aa12.28□□□□□ -0.44
RMDN3-209ENST00000560588 HSP90AB3PQ58FF7 597 aa12.28□□□□□ -0.44
RMDN3-209ENST00000560588 LARP1BQ659C4 914 aaKnown RBP12.28□□□□□ -0.44
RMDN3-209ENST00000560588 DDX54Q8TDD1 881 aaKnown RBP12.28□□□□□ -0.44
RMDN3-209ENST00000560588 NEK1Q96PY6 1258 aa12.28□□□□□ -0.44
RMDN3-209ENST00000560588 CNPY2Q9Y2B0 182 aa12.28□□□□□ -0.44
RMDN3-209ENST00000560588 PCCAP05165 728 aaPredicted RBP12.27□□□□□ -0.44
RMDN3-209ENST00000560588 MCM5P33992 734 aa12.27□□□□□ -0.44
RMDN3-209ENST00000560588 CEP126Q9P2H0 1117 aa12.27□□□□□ -0.44
RMDN3-209ENST00000560588 ELP1O95163 1332 aa12.27□□□□□ -0.45
RMDN3-209ENST00000560588 GADD45BO75293 160 aaPredicted RBP12.27□□□□□ -0.45
RMDN3-209ENST00000560588 KRT85P78386 507 aa12.27□□□□□ -0.45
RMDN3-209ENST00000560588 CHAMP1Q96JM3 812 aa12.27□□□□□ -0.45
RMDN3-209ENST00000560588 NEUROD6Q96NK8 337 aa12.27□□□□□ -0.45
RMDN3-209ENST00000560588 LLPHQ9BRT6 129 aaKnown RBP12.27□□□□□ -0.45
RMDN3-209ENST00000560588 COL14A1Q05707 1796 aaKnown RBP12.27□□□□□ -0.45
RMDN3-209ENST00000560588 CDHR2Q9BYE9 1310 aa12.26□□□□□ -0.45
RMDN3-209ENST00000560588 ST3GAL1Q11201 340 aa12.26□□□□□ -0.45
RMDN3-209ENST00000560588 TOB2Q14106 344 aaPredicted RBP12.26□□□□□ -0.45
RMDN3-209ENST00000560588 CCDC57Q2TAC2 916 aa12.26□□□□□ -0.45
RMDN3-209ENST00000560588 ZMYM1Q5SVZ6 1142 aa12.26□□□□□ -0.45
RMDN3-209ENST00000560588 ZBTB3Q9H5J0 574 aa12.26□□□□□ -0.45
RMDN3-209ENST00000560588 STRN4Q9NRL3 753 aa12.26□□□□□ -0.45
RMDN3-209ENST00000560588 RNF113AO15541 343 aaKnown RBP12.26□□□□□ -0.45
RMDN3-209ENST00000560588 ZFYP08048 801 aaPredicted RBP12.26□□□□□ -0.45
RMDN3-209ENST00000560588 LARP6Q9BRS8 491 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms