RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 EPHX2P34913 555 aa18.09■□□□□ 0.49
TPM1-223ENST00000560445 FAM89AQ96GI7 184 aa18.09■□□□□ 0.49
TPM1-223ENST00000560445 CDHR2Q9BYE9 1310 aa18.08■□□□□ 0.49
TPM1-223ENST00000560445 IRS4O14654 1257 aaPredicted RBP18.08■□□□□ 0.48
TPM1-223ENST00000560445 EAPPQ56P03 285 aaPredicted RBP18.08■□□□□ 0.48
TPM1-223ENST00000560445 C8orf58Q8NAV2 365 aa18.08■□□□□ 0.48
TPM1-223ENST00000560445 CWC25Q9NXE8 425 aaPredicted RBP18.08■□□□□ 0.48
TPM1-223ENST00000560445 ZNRF3Q9ULT6 936 aa18.08■□□□□ 0.48
TPM1-223ENST00000560445 CLEC11AQ9Y240 323 aa18.08■□□□□ 0.48
TPM1-223ENST00000560445 GJA3Q9Y6H8 435 aa18.08■□□□□ 0.48
TPM1-223ENST00000560445 DDX60Q8IY21 1712 aaKnown RBP18.08■□□□□ 0.48
TPM1-223ENST00000560445 TWISTNBQ3B726 338 aaPredicted RBP18.07■□□□□ 0.48
TPM1-223ENST00000560445 WDR63Q8IWG1 891 aa18.07■□□□□ 0.48
TPM1-223ENST00000560445 CREBZFQ9NS37 354 aa18.07■□□□□ 0.48
TPM1-223ENST00000560445 LRRC37AA6NMS7 1700 aa18.06■□□□□ 0.48
TPM1-223ENST00000560445 PCCAP05165 728 aaPredicted RBP18.06■□□□□ 0.48
TPM1-223ENST00000560445 KIAA2012Q0VF49 1180 aa18.06■□□□□ 0.48
TPM1-223ENST00000560445 TNIP1Q15025 636 aa18.06■□□□□ 0.48
TPM1-223ENST00000560445 AOC3Q16853 763 aa18.06■□□□□ 0.48
TPM1-223ENST00000560445 CCDC152Q4G0S7 254 aa18.06■□□□□ 0.48
TPM1-223ENST00000560445 JMYQ8N9B5 988 aa18.06■□□□□ 0.48
TPM1-223ENST00000560445 MYD88Q99836 296 aa18.06■□□□□ 0.48
TPM1-223ENST00000560445 METTL22Q9BUU2 404 aaPredicted RBP18.06■□□□□ 0.48
TPM1-223ENST00000560445 CACNA1FO60840 1977 aa18.06■□□□□ 0.48
TPM1-223ENST00000560445 KSR2Q6VAB6 950 aa18.05■□□□□ 0.48
TPM1-223ENST00000560445 EYA3Q99504 573 aa18.05■□□□□ 0.48
TPM1-223ENST00000560445 PHAXQ9H814 394 aaKnown RBP18.05■□□□□ 0.48
TPM1-223ENST00000560445 CCDC184Q52MB2 194 aa18.04■□□□□ 0.48
TPM1-223ENST00000560445 USP50Q70EL3 339 aaPredicted RBP18.04■□□□□ 0.48
TPM1-223ENST00000560445 TSR2Q969E8 191 aaKnown RBP18.04■□□□□ 0.48
TPM1-223ENST00000560445 MYH16Q9H6N6 1097 aa18.04■□□□□ 0.48
TPM1-223ENST00000560445 PDE8AO60658 829 aa18.03■□□□□ 0.48
TPM1-223ENST00000560445 MAP3K2Q9Y2U5 619 aa18.03■□□□□ 0.48
TPM1-223ENST00000560445 RPS8P62241 208 aaKnown RBP18.02■□□□□ 0.48
TPM1-223ENST00000560445 CIAPIN1Q6FI81 312 aa18.02■□□□□ 0.48
TPM1-223ENST00000560445 NSFL1CQ9UNZ2 370 aaKnown RBP18.02■□□□□ 0.48
TPM1-223ENST00000560445 ADAMTSL1Q8N6G6 1762 aa18.02■□□□□ 0.47
TPM1-223ENST00000560445 PI4KAP2A4QPH2 592 aa18.01■□□□□ 0.47
TPM1-223ENST00000560445 HTRA3P83110 453 aa18.01■□□□□ 0.47
TPM1-223ENST00000560445 WASHC4Q2M389 1173 aa18.01■□□□□ 0.47
TPM1-223ENST00000560445 RTL5Q5HYW3 569 aaPredicted RBP18.01■□□□□ 0.47
TPM1-223ENST00000560445 TSPYL6Q8N831 410 aa18.01■□□□□ 0.47
TPM1-223ENST00000560445 PI4KAP1Q8N8J0 262 aa18.01■□□□□ 0.47
TPM1-223ENST00000560445 CDC5LQ99459 802 aaKnown RBP18.01■□□□□ 0.47
TPM1-223ENST00000560445 ADARB2Q9NS39 739 aaKnown RBP18.01■□□□□ 0.47
TPM1-223ENST00000560445 PASKQ96RG2 1323 aa18■□□□□ 0.47
TPM1-223ENST00000560445 FANCIQ9NVI1 1328 aa18■□□□□ 0.47
TPM1-223ENST00000560445 COL4A5P29400 1685 aa18■□□□□ 0.47
TPM1-223ENST00000560445 TMEM88BA6NKF7 163 aa18■□□□□ 0.47
TPM1-223ENST00000560445 C6orf229H3BNL8 230 aa18■□□□□ 0.47
TPM1-223ENST00000560445 SLC4A2P04920 1241 aa18■□□□□ 0.47
TPM1-223ENST00000560445 BCL2L13Q9BXK5 485 aa18■□□□□ 0.47
TPM1-223ENST00000560445 G3V3G9 751 aa17.99■□□□□ 0.47
TPM1-223ENST00000560445 POTEIP0CG38 1075 aa17.99■□□□□ 0.47
TPM1-223ENST00000560445 POTEJP0CG39 1038 aa17.99■□□□□ 0.47
TPM1-223ENST00000560445 SCNN1DP51172 638 aa17.99■□□□□ 0.47
TPM1-223ENST00000560445 DCAF8Q5TAQ9 597 aa17.99■□□□□ 0.47
TPM1-223ENST00000560445 ANKRD18AQ8IVF6 992 aa17.99■□□□□ 0.47
TPM1-223ENST00000560445 CNTROBQ8N137 903 aa17.99■□□□□ 0.47
TPM1-223ENST00000560445 CELF1Q92879 486 aaKnown RBP17.99■□□□□ 0.47
TPM1-223ENST00000560445 GPRC5DQ9NZD1 345 aa17.99■□□□□ 0.47
TPM1-223ENST00000560445 CXCL9Q07325 125 aa17.98■□□□□ 0.47
TPM1-223ENST00000560445 ZC3H12CQ9C0D7 883 aaKnown RBP17.98■□□□□ 0.47
TPM1-223ENST00000560445 PODXL2Q9NZ53 605 aa17.98■□□□□ 0.47
TPM1-223ENST00000560445 ANKIB1Q9P2G1 1089 aa17.98■□□□□ 0.47
TPM1-223ENST00000560445 DUOX1Q9NRD9 1551 aa17.97■□□□□ 0.47
TPM1-223ENST00000560445 ITGBL1O95965 494 aaPredicted RBP17.97■□□□□ 0.47
TPM1-223ENST00000560445 RPS12P25398 132 aaKnown RBP17.97■□□□□ 0.47
TPM1-223ENST00000560445 CTSWP56202 376 aa17.97■□□□□ 0.47
TPM1-223ENST00000560445 FLIIQ13045 1269 aa17.97■□□□□ 0.47
TPM1-223ENST00000560445 FKBP5Q13451 457 aaPredicted RBP17.97■□□□□ 0.47
TPM1-223ENST00000560445 ZC3H15Q8WU90 426 aaKnown RBP17.97■□□□□ 0.47
TPM1-223ENST00000560445 GGA1Q9UJY5 639 aa17.97■□□□□ 0.47
TPM1-223ENST00000560445 MYH3P11055 1940 aa17.97■□□□□ 0.47
TPM1-223ENST00000560445 RTL9Q8NET4 1388 aa17.96■□□□□ 0.47
TPM1-223ENST00000560445 H7C1D1 291 aa17.96■□□□□ 0.47
TPM1-223ENST00000560445 GMPSP49915 693 aaPredicted RBP17.96■□□□□ 0.47
TPM1-223ENST00000560445 FAM9BQ8IZU0 186 aa17.96■□□□□ 0.47
TPM1-223ENST00000560445 ZNF428Q96B54 188 aa17.96■□□□□ 0.47
TPM1-223ENST00000560445 TAF1P21675 1872 aa17.96■□□□□ 0.47
TPM1-223ENST00000560445 XDHP47989 1333 aa17.96■□□□□ 0.46
TPM1-223ENST00000560445 CNTNAP1P78357 1384 aa17.95■□□□□ 0.46
TPM1-223ENST00000560445 NEURL1BA8MQ27 555 aa17.95■□□□□ 0.46
TPM1-223ENST00000560445 EPS15P42566 896 aa17.95■□□□□ 0.46
TPM1-223ENST00000560445 GPSM2P81274 684 aa17.95■□□□□ 0.46
TPM1-223ENST00000560445 MAP1SQ66K74 1059 aaPredicted RBP17.95■□□□□ 0.46
TPM1-223ENST00000560445 LINS1Q8NG48 757 aa17.95■□□□□ 0.46
TPM1-223ENST00000560445 TBC1D16Q8TBP0 767 aa17.95■□□□□ 0.46
TPM1-223ENST00000560445 DPF2Q92785 391 aa17.95■□□□□ 0.46
TPM1-223ENST00000560445 RAD17O75943 681 aa17.94■□□□□ 0.46
TPM1-223ENST00000560445 UFL1O94874 794 aa17.94■□□□□ 0.46
TPM1-223ENST00000560445 DNAAF4Q8WXU2 420 aa17.94■□□□□ 0.46
TPM1-223ENST00000560445 SALL2Q9Y467 1007 aaPredicted RBP17.94■□□□□ 0.46
TPM1-223ENST00000560445 LTBP1Q14766 1721 aa17.93■□□□□ 0.46
TPM1-223ENST00000560445 IGKV5-2P06315 115 aa17.93■□□□□ 0.46
TPM1-223ENST00000560445 ATP2B4P23634 1241 aa17.93■□□□□ 0.46
TPM1-223ENST00000560445 IFFO2Q5TF58 517 aa17.93■□□□□ 0.46
TPM1-223ENST00000560445 UBE3BQ7Z3V4 1068 aa17.93■□□□□ 0.46
TPM1-223ENST00000560445 MKRN1Q9UHC7 482 aaKnown RBP17.93■□□□□ 0.46
TPM1-223ENST00000560445 ABT1Q9ULW3 272 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms