RNA–Protein interactions for RNA: ENST00000560336.6

LINC00520-206, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 883 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-206ENST00000560336 TMEM132EQ6IEE7 984 aa10.68□□□□□ -0.7
LINC00520-206ENST00000560336 USP17L2Q6R6M4 530 aa10.68□□□□□ -0.7
LINC00520-206ENST00000560336 USP17L1Q7RTZ2 530 aa10.68□□□□□ -0.7
LINC00520-206ENST00000560336 YTHDC1Q96MU7 727 aaKnown RBP10.68□□□□□ -0.7
LINC00520-206ENST00000560336 GTF3C3Q9Y5Q9 886 aa10.68□□□□□ -0.7
LINC00520-206ENST00000560336 CENPJQ9HC77 1338 aaPredicted RBP10.67□□□□□ -0.7
LINC00520-206ENST00000560336 TMEM229AB2RXF0 380 aa10.67□□□□□ -0.7
LINC00520-206ENST00000560336 WASLO00401 505 aaPredicted RBP10.67□□□□□ -0.7
LINC00520-206ENST00000560336 TLR1Q15399 786 aa10.67□□□□□ -0.7
LINC00520-206ENST00000560336 CDCA8Q53HL2 280 aa10.67□□□□□ -0.7
LINC00520-206ENST00000560336 TMEM214Q6NUQ4 689 aaKnown RBP10.67□□□□□ -0.7
LINC00520-206ENST00000560336 TAS1R3Q7RTX0 852 aa10.67□□□□□ -0.7
LINC00520-206ENST00000560336 PLEKHM2Q8IWE5 1019 aa10.67□□□□□ -0.7
LINC00520-206ENST00000560336 VWA5B2Q8N398 1253 aa10.67□□□□□ -0.7
LINC00520-206ENST00000560336 GPR161Q8N6U8 529 aaKnown RBP10.67□□□□□ -0.7
LINC00520-206ENST00000560336 CDC14CA4D256 554 aa10.66□□□□□ -0.7
LINC00520-206ENST00000560336 PHKA2P46019 1235 aa10.66□□□□□ -0.7
LINC00520-206ENST00000560336 NANOS1Q8WY41 292 aaKnown RBP10.66□□□□□ -0.7
LINC00520-206ENST00000560336 CUEDC1Q9NWM3 386 aaPredicted RBP10.66□□□□□ -0.7
LINC00520-206ENST00000560336 TFIP11Q9UBB9 837 aaKnown RBP10.66□□□□□ -0.7
LINC00520-206ENST00000560336 SERTAD1Q9UHV2 236 aa10.66□□□□□ -0.7
LINC00520-206ENST00000560336 TMEM2Q9UHN6 1383 aa10.65□□□□□ -0.7
LINC00520-206ENST00000560336 SLIT1O75093 1534 aa10.65□□□□□ -0.7
LINC00520-206ENST00000560336 ITSN1Q15811 1721 aa10.65□□□□□ -0.7
LINC00520-206ENST00000560336 CCER2I3L3R5 266 aa10.65□□□□□ -0.7
LINC00520-206ENST00000560336 GTF2E1P29083 439 aaPredicted RBP10.65□□□□□ -0.7
LINC00520-206ENST00000560336 PSME1Q06323 249 aa10.65□□□□□ -0.7
LINC00520-206ENST00000560336 WDR44Q5JSH3 913 aa10.65□□□□□ -0.7
LINC00520-206ENST00000560336 GAS2L1Q99501 681 aaPredicted RBP10.65□□□□□ -0.7
LINC00520-206ENST00000560336 TIMMDC1Q9NPL8 285 aa10.65□□□□□ -0.7
LINC00520-206ENST00000560336 DYRK1BQ9Y463 629 aa10.65□□□□□ -0.7
LINC00520-206ENST00000560336 YTHDC2Q9H6S0 1430 aaKnown RBP10.65□□□□□ -0.7
LINC00520-206ENST00000560336 DLC1Q96QB1 1528 aa10.64□□□□□ -0.71
LINC00520-206ENST00000560336 PTPRMP28827 1452 aa10.64□□□□□ -0.71
LINC00520-206ENST00000560336 GNASQ5JWF2 1037 aa10.64□□□□□ -0.71
LINC00520-206ENST00000560336 STK26Q9P289 416 aa10.64□□□□□ -0.71
LINC00520-206ENST00000560336 SBNO2Q9Y2G9 1366 aa10.64□□□□□ -0.71
LINC00520-206ENST00000560336 CHD2O14647 1828 aaKnown RBP10.63□□□□□ -0.71
LINC00520-206ENST00000560336 KIF20BQ96Q89 1820 aa10.63□□□□□ -0.71
LINC00520-206ENST00000560336 SMTNP53814 917 aa10.63□□□□□ -0.71
LINC00520-206ENST00000560336 CNGB1Q14028 1251 aaPredicted RBP10.63□□□□□ -0.71
LINC00520-206ENST00000560336 RIPOR1Q6ZS17 1223 aa10.63□□□□□ -0.71
LINC00520-206ENST00000560336 SV2AQ7L0J3 742 aa10.63□□□□□ -0.71
LINC00520-206ENST00000560336 TRIM50Q86XT4 487 aa10.63□□□□□ -0.71
LINC00520-206ENST00000560336 MKRN1Q9UHC7 482 aaKnown RBP10.63□□□□□ -0.71
LINC00520-206ENST00000560336 EID1Q9Y6B2 187 aa10.63□□□□□ -0.71
LINC00520-206ENST00000560336 DIP2AQ14689 1571 aa10.63□□□□□ -0.71
LINC00520-206ENST00000560336 RGPD8O14715 1765 aaPredicted RBP10.62□□□□□ -0.71
LINC00520-206ENST00000560336 ARHGAP23Q9P227 1491 aa10.62□□□□□ -0.71
LINC00520-206ENST00000560336 ANKRD26Q9UPS8 1709 aa10.62□□□□□ -0.71
LINC00520-206ENST00000560336 PALM3A6NDB9 673 aaPredicted RBP10.62□□□□□ -0.71
LINC00520-206ENST00000560336 CENPBP07199 599 aaPredicted RBP10.62□□□□□ -0.71
LINC00520-206ENST00000560336 C4orf17Q53FE4 359 aa10.62□□□□□ -0.71
LINC00520-206ENST00000560336 MAFBQ9Y5Q3 323 aaPredicted RBP10.62□□□□□ -0.71
LINC00520-206ENST00000560336 CPS1P31327 1500 aa10.62□□□□□ -0.71
LINC00520-206ENST00000560336 TULP4Q9NRJ4 1543 aa10.62□□□□□ -0.71
LINC00520-206ENST00000560336 CLDN10P78369 228 aa10.61□□□□□ -0.71
LINC00520-206ENST00000560336 INSM1Q01101 510 aaPredicted RBP10.61□□□□□ -0.71
LINC00520-206ENST00000560336 THEMISQ8N1K5 641 aaPredicted RBP10.61□□□□□ -0.71
LINC00520-206ENST00000560336 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.61□□□□□ -0.71
LINC00520-206ENST00000560336 RHBDD1Q8TEB9 315 aa10.61□□□□□ -0.71
LINC00520-206ENST00000560336 SLC4A9Q96Q91 983 aa10.61□□□□□ -0.71
LINC00520-206ENST00000560336 PPP1R12CQ9BZL4 782 aa10.61□□□□□ -0.71
LINC00520-206ENST00000560336 PRKRIP1Q9H875 184 aaPredicted RBP10.61□□□□□ -0.71
LINC00520-206ENST00000560336 POGKQ9P215 609 aa10.61□□□□□ -0.71
LINC00520-206ENST00000560336 KIAA1024Q9UPX6 916 aa10.61□□□□□ -0.71
LINC00520-206ENST00000560336 PLEKHG1Q9ULL1 1385 aa10.61□□□□□ -0.71
LINC00520-206ENST00000560336 AKAP12Q02952 1782 aa10.6□□□□□ -0.71
LINC00520-206ENST00000560336 ZBTB7BO15156 539 aaPredicted RBP10.6□□□□□ -0.71
LINC00520-206ENST00000560336 SAFB2Q14151 953 aaKnown RBP eCLIP10.6□□□□□ -0.71
LINC00520-206ENST00000560336 TXNDC2Q86VQ3 553 aa10.6□□□□□ -0.71
LINC00520-206ENST00000560336 ZMYND15Q9H091 742 aa10.6□□□□□ -0.71
LINC00520-206ENST00000560336 PANK3Q9H999 370 aa10.6□□□□□ -0.71
LINC00520-206ENST00000560336 ZNF358Q9NW07 568 aa10.6□□□□□ -0.71
LINC00520-206ENST00000560336 LRPPRCP42704 1394 aaKnown RBP10.6□□□□□ -0.71
LINC00520-206ENST00000560336 EVC2Q86UK5 1308 aa10.59□□□□□ -0.71
LINC00520-206ENST00000560336 A6NJY4 79 aa10.59□□□□□ -0.71
LINC00520-206ENST00000560336 ATP1A2P50993 1020 aa10.59□□□□□ -0.71
LINC00520-206ENST00000560336 DBN1Q16643 649 aa10.59□□□□□ -0.71
LINC00520-206ENST00000560336 TRIM22Q8IYM9 498 aa10.59□□□□□ -0.71
LINC00520-206ENST00000560336 OGFOD1Q8N543 542 aa10.59□□□□□ -0.71
LINC00520-206ENST00000560336 COL25A1Q9BXS0 654 aaPredicted RBP10.59□□□□□ -0.71
LINC00520-206ENST00000560336 GPAMQ9HCL2 828 aa10.59□□□□□ -0.71
LINC00520-206ENST00000560336 DNAAF2Q9NVR5 837 aaKnown RBP10.59□□□□□ -0.71
LINC00520-206ENST00000560336 USP32Q8NFA0 1604 aa10.58□□□□□ -0.72
LINC00520-206ENST00000560336 KTN1Q86UP2 1357 aaKnown RBP10.58□□□□□ -0.72
LINC00520-206ENST00000560336 BACH1O14867 736 aa10.58□□□□□ -0.72
LINC00520-206ENST00000560336 F11P03951 625 aa10.58□□□□□ -0.72
LINC00520-206ENST00000560336 KRT76Q01546 638 aa10.58□□□□□ -0.72
LINC00520-206ENST00000560336 CCDC102BQ68D86 513 aa10.58□□□□□ -0.72
LINC00520-206ENST00000560336 TPCN2Q8NHX9 752 aa10.58□□□□□ -0.72
LINC00520-206ENST00000560336 ZNF837Q96EG3 531 aaPredicted RBP10.58□□□□□ -0.72
LINC00520-206ENST00000560336 PRAM1Q96QH2 718 aa10.58□□□□□ -0.72
LINC00520-206ENST00000560336 XRN1Q8IZH2 1706 aaKnown RBP10.58□□□□□ -0.72
LINC00520-206ENST00000560336 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.58□□□□□ -0.72
LINC00520-206ENST00000560336 ADAMTS13Q76LX8 1427 aa10.58□□□□□ -0.72
LINC00520-206ENST00000560336 METP08581 1390 aa10.57□□□□□ -0.72
LINC00520-206ENST00000560336 A0A1B0GTH6 734 aa10.57□□□□□ -0.72
LINC00520-206ENST00000560336 LTKP29376 864 aa10.57□□□□□ -0.72
LINC00520-206ENST00000560336 MTFR1Q15390 333 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms