RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 R3HDM1Q15032 1099 aaKnown RBP8.35□□□□□ -1.07
CLPX-206ENST00000560166 QPCTQ16769 361 aa8.35□□□□□ -1.07
CLPX-206ENST00000560166 TUSC1Q2TAM9 212 aa8.35□□□□□ -1.07
CLPX-206ENST00000560166 MEIOBQ8N635 442 aa8.35□□□□□ -1.07
CLPX-206ENST00000560166 CCDC97Q96F63 343 aaPredicted RBP8.35□□□□□ -1.07
CLPX-206ENST00000560166 CABP1Q9NZU7 370 aa8.35□□□□□ -1.07
CLPX-206ENST00000560166 NR3C2P08235 984 aa8.34□□□□□ -1.07
CLPX-206ENST00000560166 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.34□□□□□ -1.07
CLPX-206ENST00000560166 MTMR14Q8NCE2 650 aa8.34□□□□□ -1.07
CLPX-206ENST00000560166 GDPD2Q9HCC8 539 aa8.34□□□□□ -1.07
CLPX-206ENST00000560166 ZNF330Q9Y3S2 320 aaPredicted RBP8.34□□□□□ -1.07
CLPX-206ENST00000560166 CCDC9Q9Y3X0 531 aaKnown RBP8.34□□□□□ -1.07
CLPX-206ENST00000560166 PCDHB15Q9Y5E8 787 aa8.34□□□□□ -1.07
CLPX-206ENST00000560166 FMN2Q9NZ56 1722 aa8.34□□□□□ -1.07
CLPX-206ENST00000560166 C6orf229H3BNL8 230 aa8.33□□□□□ -1.08
CLPX-206ENST00000560166 AP1G2O75843 785 aa8.33□□□□□ -1.08
CLPX-206ENST00000560166 FDX1P10109 184 aa8.33□□□□□ -1.08
CLPX-206ENST00000560166 GRM5P41594 1212 aa8.33□□□□□ -1.08
CLPX-206ENST00000560166 PTSQ03393 145 aa8.33□□□□□ -1.08
CLPX-206ENST00000560166 SSH2Q76I76 1423 aa8.33□□□□□ -1.08
CLPX-206ENST00000560166 NALCNQ8IZF0 1738 aa8.33□□□□□ -1.08
CLPX-206ENST00000560166 ORAI2Q96SN7 254 aa8.33□□□□□ -1.08
CLPX-206ENST00000560166 SERPINA10Q9UK55 444 aa8.33□□□□□ -1.08
CLPX-206ENST00000560166 BCL9LQ86UU0 1499 aa8.32□□□□□ -1.08
CLPX-206ENST00000560166 TTC21AQ8NDW8 1320 aa8.32□□□□□ -1.08
CLPX-206ENST00000560166 ITSN1Q15811 1721 aa8.32□□□□□ -1.08
CLPX-206ENST00000560166 USP6P35125 1406 aa8.32□□□□□ -1.08
CLPX-206ENST00000560166 EP400Q96L91 3159 aa8.32□□□□□ -1.08
CLPX-206ENST00000560166 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.32□□□□□ -1.08
CLPX-206ENST00000560166 LILRB3O75022 631 aa8.32□□□□□ -1.08
CLPX-206ENST00000560166 PDIA4P13667 645 aaKnown RBP8.32□□□□□ -1.08
CLPX-206ENST00000560166 KRT27Q7Z3Y8 459 aa8.32□□□□□ -1.08
CLPX-206ENST00000560166 SEPT12Q8IYM1 358 aa8.32□□□□□ -1.08
CLPX-206ENST00000560166 C1orf167Q5SNV9 1468 aa8.32□□□□□ -1.08
CLPX-206ENST00000560166 MSTNO14793 375 aa8.31□□□□□ -1.08
CLPX-206ENST00000560166 RTL5Q5HYW3 569 aaPredicted RBP8.31□□□□□ -1.08
CLPX-206ENST00000560166 CC2D1BQ5T0F9 858 aaKnown RBP8.31□□□□□ -1.08
CLPX-206ENST00000560166 DESI1Q6ICB0 168 aa8.31□□□□□ -1.08
CLPX-206ENST00000560166 CABLES1Q8TDN4 633 aa8.31□□□□□ -1.08
CLPX-206ENST00000560166 KRTAP9-2Q9BYQ4 174 aa8.31□□□□□ -1.08
CLPX-206ENST00000560166 MRS2Q9HD23 443 aa8.31□□□□□ -1.08
CLPX-206ENST00000560166 ACEP12821 1306 aa8.3□□□□□ -1.08
CLPX-206ENST00000560166 MON2Q7Z3U7 1717 aa8.3□□□□□ -1.08
CLPX-206ENST00000560166 FYB1O15117 783 aa8.3□□□□□ -1.08
CLPX-206ENST00000560166 PPP2R1AP30153 589 aa8.3□□□□□ -1.08
CLPX-206ENST00000560166 GJA5P36382 358 aa8.3□□□□□ -1.08
CLPX-206ENST00000560166 ABL2P42684 1182 aa8.3□□□□□ -1.08
CLPX-206ENST00000560166 XPCQ01831 940 aaPredicted RBP8.3□□□□□ -1.08
CLPX-206ENST00000560166 ARID5BQ14865 1188 aa8.3□□□□□ -1.08
CLPX-206ENST00000560166 MORC1Q86VD1 984 aa8.3□□□□□ -1.08
CLPX-206ENST00000560166 UNC5CLQ8IV45 518 aa8.3□□□□□ -1.08
CLPX-206ENST00000560166 PPP1R1BQ9UD71 204 aaPredicted RBP8.3□□□□□ -1.08
CLPX-206ENST00000560166 AATKQ6ZMQ8 1374 aa8.3□□□□□ -1.08
CLPX-206ENST00000560166 GLI3P10071 1580 aa8.3□□□□□ -1.08
CLPX-206ENST00000560166 NRKQ7Z2Y5 1582 aa8.3□□□□□ -1.08
CLPX-206ENST00000560166 BRWD3Q6RI45 1802 aa8.29□□□□□ -1.08
CLPX-206ENST00000560166 CCDC155Q8N6L0 562 aa8.29□□□□□ -1.08
CLPX-206ENST00000560166 TSEN34Q9BSV6 310 aaKnown RBP8.29□□□□□ -1.08
CLPX-206ENST00000560166 USP31Q70CQ4 1352 aa8.29□□□□□ -1.08
CLPX-206ENST00000560166 SMG6Q86US8 1419 aaKnown RBP8.29□□□□□ -1.08
CLPX-206ENST00000560166 TTC21BQ7Z4L5 1316 aa8.29□□□□□ -1.08
CLPX-206ENST00000560166 AKAP12Q02952 1782 aa8.28□□□□□ -1.08
CLPX-206ENST00000560166 KIF1AQ12756 1690 aa8.28□□□□□ -1.08
CLPX-206ENST00000560166 TTLL8A6PVC2 850 aa8.28□□□□□ -1.08
CLPX-206ENST00000560166 USP17L8P0C7I0 530 aa8.28□□□□□ -1.08
CLPX-206ENST00000560166 PLA2G4EQ3MJ16 856 aa8.28□□□□□ -1.08
CLPX-206ENST00000560166 WWC1Q8IX03 1113 aa8.28□□□□□ -1.08
CLPX-206ENST00000560166 NGDNQ8NEJ9 315 aaKnown RBP8.28□□□□□ -1.08
CLPX-206ENST00000560166 PNISRQ8TF01 805 aaKnown RBP8.28□□□□□ -1.08
CLPX-206ENST00000560166 FOXJ1Q92949 421 aa8.28□□□□□ -1.08
CLPX-206ENST00000560166 PSMG3-AS1Q96PY0 264 aa8.28□□□□□ -1.08
CLPX-206ENST00000560166 SPOCK3Q9BQ16 436 aa8.28□□□□□ -1.08
CLPX-206ENST00000560166 PRM3Q9NNZ6 103 aa8.28□□□□□ -1.08
CLPX-206ENST00000560166 TBC1D2BQ9UPU7 963 aa8.28□□□□□ -1.08
CLPX-206ENST00000560166 COL22A1Q8NFW1 1626 aaPredicted RBP8.28□□□□□ -1.08
CLPX-206ENST00000560166 OVOS2A0A0J9YW53 1432 aa8.28□□□□□ -1.08
CLPX-206ENST00000560166 OVOS2Q6IE36 1432 aa8.28□□□□□ -1.08
CLPX-206ENST00000560166 ITGB2P05107 769 aa8.27□□□□□ -1.09
CLPX-206ENST00000560166 ESCO1Q5FWF5 840 aa8.27□□□□□ -1.09
CLPX-206ENST00000560166 PRR7Q8TB68 274 aa8.27□□□□□ -1.09
CLPX-206ENST00000560166 NPHP3Q7Z494 1330 aa8.27□□□□□ -1.09
CLPX-206ENST00000560166 ANKRD26Q9UPS8 1709 aa8.26□□□□□ -1.09
CLPX-206ENST00000560166 MARF1Q9Y4F3 1742 aaKnown RBP8.26□□□□□ -1.09
CLPX-206ENST00000560166 KIF24Q5T7B8 1368 aa8.26□□□□□ -1.09
CLPX-206ENST00000560166 KRTAP9-6A0A140TA67 174 aa8.26□□□□□ -1.09
CLPX-206ENST00000560166 SLC35F4A4IF30 521 aa8.26□□□□□ -1.09
CLPX-206ENST00000560166 EZH2Q15910 746 aaKnown RBP8.26□□□□□ -1.09
CLPX-206ENST00000560166 CCDC184Q52MB2 194 aa8.26□□□□□ -1.09
CLPX-206ENST00000560166 PRPF38BQ5VTL8 546 aaKnown RBP8.26□□□□□ -1.09
CLPX-206ENST00000560166 COG3Q96JB2 828 aa8.26□□□□□ -1.09
CLPX-206ENST00000560166 CFAP53Q96M91 514 aa8.26□□□□□ -1.09
CLPX-206ENST00000560166 ZBTB3Q9H5J0 574 aa8.26□□□□□ -1.09
CLPX-206ENST00000560166 USP54Q70EL1 1684 aa8.26□□□□□ -1.09
CLPX-206ENST00000560166 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.26□□□□□ -1.09
CLPX-206ENST00000560166 FOXO3O43524 673 aa8.25□□□□□ -1.09
CLPX-206ENST00000560166 CENPBP07199 599 aaPredicted RBP8.25□□□□□ -1.09
CLPX-206ENST00000560166 FAM182BQ5T319 152 aa8.25□□□□□ -1.09
CLPX-206ENST00000560166 LYPD4Q6UWN0 246 aa8.25□□□□□ -1.09
CLPX-206ENST00000560166 VWA5B2Q8N398 1253 aa8.25□□□□□ -1.09
CLPX-206ENST00000560166 GGNBP2Q9H3C7 697 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms