RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 DMGDHQ9UI17 866 aaKnown RBP9.44□□□□□ -0.9
CRNDE-208ENST00000560029 RASA1P20936 1047 aa9.43□□□□□ -0.9
CRNDE-208ENST00000560029 TARSP26639 723 aaKnown RBP9.43□□□□□ -0.9
CRNDE-208ENST00000560029 FBXO11Q86XK2 927 aa9.43□□□□□ -0.9
CRNDE-208ENST00000560029 HINFPQ9BQA5 517 aa9.43□□□□□ -0.9
CRNDE-208ENST00000560029 KLK14Q9P0G3 267 aa9.43□□□□□ -0.9
CRNDE-208ENST00000560029 HFE2Q6ZVN8 426 aa9.42□□□□□ -0.9
CRNDE-208ENST00000560029 STAG2Q8N3U4 1231 aa9.42□□□□□ -0.9
CRNDE-208ENST00000560029 MEGF10Q96KG7 1140 aa9.42□□□□□ -0.9
CRNDE-208ENST00000560029 EFCC1Q9HA90 598 aa9.42□□□□□ -0.9
CRNDE-208ENST00000560029 MAFBQ9Y5Q3 323 aaPredicted RBP9.42□□□□□ -0.9
CRNDE-208ENST00000560029 TGFBR3LH3BV60 316 aa9.41□□□□□ -0.9
CRNDE-208ENST00000560029 HIF1AQ16665 826 aa9.41□□□□□ -0.9
CRNDE-208ENST00000560029 RTN1Q16799 776 aa9.41□□□□□ -0.9
CRNDE-208ENST00000560029 ELMSAN1Q6PJG2 1045 aa9.41□□□□□ -0.9
CRNDE-208ENST00000560029 SASH3O75995 380 aa9.4□□□□□ -0.9
CRNDE-208ENST00000560029 SEC13P55735 322 aa9.4□□□□□ -0.9
CRNDE-208ENST00000560029 IER5Q5VY09 327 aa9.4□□□□□ -0.9
CRNDE-208ENST00000560029 DHX32Q7L7V1 743 aaKnown RBP9.4□□□□□ -0.9
CRNDE-208ENST00000560029 WFDC8Q8IUA0 241 aa9.4□□□□□ -0.9
CRNDE-208ENST00000560029 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.39□□□□□ -0.91
CRNDE-208ENST00000560029 DEAF1O75398 565 aaPredicted RBP9.39□□□□□ -0.91
CRNDE-208ENST00000560029 ALX3O95076 343 aa9.39□□□□□ -0.91
CRNDE-208ENST00000560029 IDH3AP50213 366 aa9.39□□□□□ -0.91
CRNDE-208ENST00000560029 CDCA8Q53HL2 280 aa9.39□□□□□ -0.91
CRNDE-208ENST00000560029 IFT43Q96FT9 208 aa9.39□□□□□ -0.91
CRNDE-208ENST00000560029 INPP5BP32019 993 aa9.38□□□□□ -0.91
CRNDE-208ENST00000560029 KRTAP19-1Q8IUB9 90 aa9.38□□□□□ -0.91
CRNDE-208ENST00000560029 SMG9Q9H0W8 520 aaKnown RBP9.38□□□□□ -0.91
CRNDE-208ENST00000560029 RNF112Q9ULX5 631 aa9.38□□□□□ -0.91
CRNDE-208ENST00000560029 USP20Q9Y2K6 914 aa9.38□□□□□ -0.91
CRNDE-208ENST00000560029 MAP3K6O95382 1288 aa9.37□□□□□ -0.91
CRNDE-208ENST00000560029 IGF2-ASQ6U949 168 aa9.37□□□□□ -0.91
CRNDE-208ENST00000560029 DTWD1Q8N5C7 304 aa9.37□□□□□ -0.91
CRNDE-208ENST00000560029 FRRS1LQ9P0K9 344 aa9.37□□□□□ -0.91
CRNDE-208ENST00000560029 RARAP10276 462 aa9.36□□□□□ -0.91
CRNDE-208ENST00000560029 DGKZQ13574 1117 aa9.36□□□□□ -0.91
CRNDE-208ENST00000560029 PRR23CQ6ZRP0 262 aa9.36□□□□□ -0.91
CRNDE-208ENST00000560029 TRPM4Q8TD43 1214 aa9.36□□□□□ -0.91
CRNDE-208ENST00000560029 PBXIP1Q96AQ6 731 aa9.36□□□□□ -0.91
CRNDE-208ENST00000560029 EPB42P16452 691 aa9.35□□□□□ -0.91
CRNDE-208ENST00000560029 SSTR4P31391 388 aa9.35□□□□□ -0.91
CRNDE-208ENST00000560029 SRPK2P78362 688 aaKnown RBP9.35□□□□□ -0.91
CRNDE-208ENST00000560029 PCSK7Q16549 785 aa9.35□□□□□ -0.91
CRNDE-208ENST00000560029 ARXQ96QS3 562 aa9.35□□□□□ -0.91
CRNDE-208ENST00000560029 KRTAP9-9Q9BYP9 154 aa9.35□□□□□ -0.91
CRNDE-208ENST00000560029 KRTAP9-4Q9BYQ2 154 aa9.35□□□□□ -0.91
CRNDE-208ENST00000560029 J3QW42 95 aa9.34□□□□□ -0.91
CRNDE-208ENST00000560029 DPYDQ12882 1025 aa9.34□□□□□ -0.91
CRNDE-208ENST00000560029 CRTC2Q53ET0 693 aaPredicted RBP9.34□□□□□ -0.91
CRNDE-208ENST00000560029 KANK4Q5T7N3 995 aaPredicted RBP9.34□□□□□ -0.91
CRNDE-208ENST00000560029 VRTNQ9H8Y1 702 aa9.34□□□□□ -0.91
CRNDE-208ENST00000560029 PCMTD2Q9NV79 361 aa9.34□□□□□ -0.91
CRNDE-208ENST00000560029 PPP1R15AO75807 674 aaPredicted RBP9.33□□□□□ -0.92
CRNDE-208ENST00000560029 MICAL2O94851 1124 aa9.33□□□□□ -0.92
CRNDE-208ENST00000560029 EIF2AK2P19525 551 aaKnown RBP9.33□□□□□ -0.92
CRNDE-208ENST00000560029 LARP1Q6PKG0 1096 aaKnown RBP9.33□□□□□ -0.92
CRNDE-208ENST00000560029 DLL1O00548 723 aa9.32□□□□□ -0.92
CRNDE-208ENST00000560029 ARSDP51689 593 aa9.32□□□□□ -0.92
CRNDE-208ENST00000560029 GPLD1P80108 840 aa9.32□□□□□ -0.92
CRNDE-208ENST00000560029 GDF6Q6KF10 455 aaPredicted RBP9.32□□□□□ -0.92
CRNDE-208ENST00000560029 HOMEZQ8IX15 550 aa9.32□□□□□ -0.92
CRNDE-208ENST00000560029 AKTIPQ9H8T0 292 aa9.32□□□□□ -0.92
CRNDE-208ENST00000560029 QTRT2Q9H974 415 aaKnown RBP9.32□□□□□ -0.92
CRNDE-208ENST00000560029 FSTP19883 344 aa9.31□□□□□ -0.92
CRNDE-208ENST00000560029 MCTP1Q6DN14 999 aa9.31□□□□□ -0.92
CRNDE-208ENST00000560029 TTC9Q92623 222 aa9.31□□□□□ -0.92
CRNDE-208ENST00000560029 GOLGA2P5Q9HBQ8 144 aa9.31□□□□□ -0.92
CRNDE-208ENST00000560029 ACIN1Q9UKV3 1341 aaKnown RBP9.31□□□□□ -0.92
CRNDE-208ENST00000560029 OPLAHO14841 1288 aa9.3□□□□□ -0.92
CRNDE-208ENST00000560029 IGFBP4P22692 258 aa9.3□□□□□ -0.92
CRNDE-208ENST00000560029 PTK7Q13308 1070 aa9.3□□□□□ -0.92
CRNDE-208ENST00000560029 DZIP1LQ8IYY4 767 aaKnown RBP9.3□□□□□ -0.92
CRNDE-208ENST00000560029 AGGF1Q8N302 714 aaeCLIP9.29□□□□□ -0.92
CRNDE-208ENST00000560029 IL22RA1Q8N6P7 574 aa9.29□□□□□ -0.92
CRNDE-208ENST00000560029 PLD4Q96BZ4 506 aa9.29□□□□□ -0.92
CRNDE-208ENST00000560029 RTCBQ9Y3I0 505 aaKnown RBP9.29□□□□□ -0.92
CRNDE-208ENST00000560029 RGL4Q8IZJ4 473 aa9.28□□□□□ -0.92
CRNDE-208ENST00000560029 CMTR1Q8N1G2 835 aaKnown RBP9.28□□□□□ -0.92
CRNDE-208ENST00000560029 NSUN5Q96P11 429 aaKnown RBP9.28□□□□□ -0.92
CRNDE-208ENST00000560029 F8W735 103 aaPredicted RBP9.27□□□□□ -0.93
CRNDE-208ENST00000560029 NRLP54845 237 aa9.27□□□□□ -0.93
CRNDE-208ENST00000560029 ANKMY2Q8IV38 441 aa9.27□□□□□ -0.93
CRNDE-208ENST00000560029 TLR7Q9NYK1 1049 aaKnown RBP9.27□□□□□ -0.93
CRNDE-208ENST00000560029 LOC102724428A0A0B4J2F2 783 aa9.26□□□□□ -0.93
CRNDE-208ENST00000560029 BTBD11A6QL63 1104 aa9.26□□□□□ -0.93
CRNDE-208ENST00000560029 XYLBO75191 536 aa9.26□□□□□ -0.93
CRNDE-208ENST00000560029 ATG7O95352 703 aa9.26□□□□□ -0.93
CRNDE-208ENST00000560029 MED26O95402 600 aa9.26□□□□□ -0.93
CRNDE-208ENST00000560029 SIK1P57059 783 aa9.26□□□□□ -0.93
CRNDE-208ENST00000560029 C11orf91Q3C1V1 193 aa9.26□□□□□ -0.93
CRNDE-208ENST00000560029 RETREG2Q8NC44 543 aa9.26□□□□□ -0.93
CRNDE-208ENST00000560029 MRPL18Q9H0U6 180 aaKnown RBP9.26□□□□□ -0.93
CRNDE-208ENST00000560029 USP17L15C9J2P7 530 aa9.25□□□□□ -0.93
CRNDE-208ENST00000560029 USP17L10C9JJH3 530 aa9.25□□□□□ -0.93
CRNDE-208ENST00000560029 USP17L13C9JLJ4 530 aa9.25□□□□□ -0.93
CRNDE-208ENST00000560029 USP17L12C9JPN9 530 aa9.25□□□□□ -0.93
CRNDE-208ENST00000560029 USP17L11C9JVI0 530 aa9.25□□□□□ -0.93
CRNDE-208ENST00000560029 USP17L21D6R901 530 aa9.25□□□□□ -0.93
CRNDE-208ENST00000560029 USP17L18D6R9N7 530 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms