RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, human

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM2D3-209	ENST00000560013	C4B	P0C0L5	1744 aa		28.74	■■■□□ 2.19
TM2D3-209	ENST00000560013	RTCB	Q9Y3I0	505 aa	Known RBP	28.74	■■■□□ 2.19
TM2D3-209	ENST00000560013	SCN7A	Q01118	1682 aa		28.73	■■■□□ 2.19
TM2D3-209	ENST00000560013	RBM25	P49756	843 aa	Known RBP	28.72	■■■□□ 2.19
TM2D3-209	ENST00000560013	CCDC85A	Q96PX6	553 aa	Predicted RBP	28.72	■■■□□ 2.19
TM2D3-209	ENST00000560013	NARF	Q9UHQ1	456 aa		28.72	■■■□□ 2.19
TM2D3-209	ENST00000560013	TRIM37	O94972	964 aa		28.72	■■■□□ 2.19
TM2D3-209	ENST00000560013	LRRC24	Q50LG9	513 aa		28.72	■■■□□ 2.19
TM2D3-209	ENST00000560013	CNTROB	Q8N137	903 aa		28.72	■■■□□ 2.19
TM2D3-209	ENST00000560013	TLR7	Q9NYK1	1049 aa	Known RBP	28.72	■■■□□ 2.19
TM2D3-209	ENST00000560013	FAM177B	A6PVY3	158 aa		28.7	■■■□□ 2.19
TM2D3-209	ENST00000560013	MAP4K4	O95819	1239 aa	Predicted RBP	28.7	■■■□□ 2.19
TM2D3-209	ENST00000560013	TAF7L	Q5H9L4	462 aa		28.7	■■■□□ 2.19
TM2D3-209	ENST00000560013	GREM2	Q9H772	168 aa		28.7	■■■□□ 2.19
TM2D3-209	ENST00000560013	GPR108	Q9NPR9	543 aa		28.7	■■■□□ 2.19
TM2D3-209	ENST00000560013	NTSR2	O95665	410 aa		28.7	■■■□□ 2.18
TM2D3-209	ENST00000560013	ITGA6	P23229	1130 aa		28.7	■■■□□ 2.18
TM2D3-209	ENST00000560013	SMIM5	Q71RC9	77 aa		28.7	■■■□□ 2.18
TM2D3-209	ENST00000560013	LRRC4B	Q9NT99	713 aa		28.7	■■■□□ 2.18
TM2D3-209	ENST00000560013	CHML	P26374	656 aa		28.69	■■■□□ 2.18
TM2D3-209	ENST00000560013	PUS3	Q9BZE2	481 aa	Known RBP	28.69	■■■□□ 2.18
TM2D3-209	ENST00000560013	DDX60	Q8IY21	1712 aa	Known RBP	28.68	■■■□□ 2.18
TM2D3-209	ENST00000560013	ANKRD18B	A2A2Z9	1011 aa		28.68	■■■□□ 2.18
TM2D3-209	ENST00000560013	HSP90B1	P14625	803 aa	Known RBP	28.68	■■■□□ 2.18
TM2D3-209	ENST00000560013	ZPR1	O75312	459 aa		28.68	■■■□□ 2.18
TM2D3-209	ENST00000560013	RXRB	P28702	533 aa		28.68	■■■□□ 2.18
TM2D3-209	ENST00000560013	SLC27A3	Q5K4L6	730 aa		28.68	■■■□□ 2.18
TM2D3-209	ENST00000560013	USPL1	Q5W0Q7	1092 aa		28.68	■■■□□ 2.18
TM2D3-209	ENST00000560013	BCL2L12	Q9HB09	334 aa		28.68	■■■□□ 2.18
TM2D3-209	ENST00000560013	DBNL	Q9UJU6	430 aa	Known RBP	28.68	■■■□□ 2.18
TM2D3-209	ENST00000560013	LAMB2	P55268	1798 aa		28.67	■■■□□ 2.18
TM2D3-209	ENST00000560013	REC8	O95072	547 aa		28.66	■■■□□ 2.18
TM2D3-209	ENST00000560013	HCLS1	P14317	486 aa	Predicted RBP	28.66	■■■□□ 2.18
TM2D3-209	ENST00000560013	ARHGEF1	Q92888	912 aa	Known RBP	28.66	■■■□□ 2.18
TM2D3-209	ENST00000560013	CEP126	Q9P2H0	1117 aa		28.66	■■■□□ 2.18
TM2D3-209	ENST00000560013	ERICH6	Q7L0X2	663 aa		28.65	■■■□□ 2.18
TM2D3-209	ENST00000560013	AMIGO3	Q86WK7	504 aa		28.65	■■■□□ 2.18
TM2D3-209	ENST00000560013	ESYT1	Q9BSJ8	1104 aa		28.65	■■■□□ 2.18
TM2D3-209	ENST00000560013	SRP68	Q9UHB9	627 aa	Known RBP	28.65	■■■□□ 2.18
TM2D3-209	ENST00000560013	TRAPPC3L	Q5T215	181 aa		28.64	■■■□□ 2.18
TM2D3-209	ENST00000560013	USP26	Q9BXU7	913 aa		28.64	■■■□□ 2.18
TM2D3-209	ENST00000560013	C4A	P0C0L4	1744 aa		28.64	■■■□□ 2.18
TM2D3-209	ENST00000560013	TBC1D9B	Q66K14	1250 aa		28.63	■■■□□ 2.17
TM2D3-209	ENST00000560013	LDHAL6A	Q6ZMR3	332 aa		28.63	■■■□□ 2.17
TM2D3-209	ENST00000560013	EVI5L	Q96CN4	794 aa		28.63	■■■□□ 2.17
TM2D3-209	ENST00000560013	DBNDD2	Q9BQY9	259 aa		28.63	■■■□□ 2.17
TM2D3-209	ENST00000560013	ATP5J	P18859	108 aa		28.63	■■■□□ 2.17
TM2D3-209	ENST00000560013	EP400	Q96L91	3159 aa		28.63	■■■□□ 2.17
TM2D3-209	ENST00000560013	NEUROD6	Q96NK8	337 aa		28.62	■■■□□ 2.17
TM2D3-209	ENST00000560013	BOLA2	Q9H3K6	86 aa		28.62	■■■□□ 2.17
TM2D3-209	ENST00000560013	DAXX	Q9UER7	740 aa	Predicted RBP	28.62	■■■□□ 2.17
TM2D3-209	ENST00000560013	RFC4	P35249	363 aa		28.61	■■■□□ 2.17
TM2D3-209	ENST00000560013	TIMM10	P62072	90 aa		28.61	■■■□□ 2.17
TM2D3-209	ENST00000560013	BICDL1	Q6ZP65	573 aa		28.61	■■■□□ 2.17
TM2D3-209	ENST00000560013	RIPOR2	Q9Y4F9	1068 aa		28.61	■■■□□ 2.17
TM2D3-209	ENST00000560013	ZNF609	O15014	1411 aa		28.61	■■■□□ 2.17
TM2D3-209	ENST00000560013	AKAP2	Q9Y2D5	859 aa		28.61	■■■□□ 2.17
TM2D3-209	ENST00000560013	UBR3	Q6ZT12	1888 aa		28.6	■■■□□ 2.17
TM2D3-209	ENST00000560013	ADRA2B	P18089	450 aa		28.6	■■■□□ 2.17
TM2D3-209	ENST00000560013	CCDC152	Q4G0S7	254 aa		28.6	■■■□□ 2.17
TM2D3-209	ENST00000560013	SETDB2	Q96T68	719 aa		28.6	■■■□□ 2.17
TM2D3-209	ENST00000560013	PHF14	O94880	888 aa		28.59	■■■□□ 2.17
TM2D3-209	ENST00000560013	CNNM1	Q9NRU3	951 aa		28.59	■■■□□ 2.17
TM2D3-209	ENST00000560013		A0A1B0GUL7	405 aa		28.59	■■■□□ 2.17
TM2D3-209	ENST00000560013	HMGB2	P26583	209 aa	Known RBP	28.59	■■■□□ 2.17
TM2D3-209	ENST00000560013	BECN1	Q14457	450 aa		28.59	■■■□□ 2.17
TM2D3-209	ENST00000560013	COL24A1	Q17RW2	1714 aa		28.58	■■■□□ 2.17
TM2D3-209	ENST00000560013	ERFE	Q4G0M1	354 aa		28.58	■■■□□ 2.17
TM2D3-209	ENST00000560013	FBXO41	Q8TF61	875 aa		28.58	■■■□□ 2.17
TM2D3-209	ENST00000560013	NYX	Q9GZU5	481 aa		28.58	■■■□□ 2.17
TM2D3-209	ENST00000560013	RTL9	Q8NET4	1388 aa		28.58	■■■□□ 2.17
TM2D3-209	ENST00000560013	METTL24	Q5JXM2	366 aa		28.57	■■■□□ 2.16
TM2D3-209	ENST00000560013	KIF2C	Q99661	725 aa		28.57	■■■□□ 2.16
TM2D3-209	ENST00000560013	RGS17	Q9UGC6	210 aa	Predicted RBP	28.57	■■■□□ 2.16
TM2D3-209	ENST00000560013	TXNRD1	Q16881	649 aa		28.56	■■■□□ 2.16
TM2D3-209	ENST00000560013	LRP5	O75197	1615 aa		28.56	■■■□□ 2.16
TM2D3-209	ENST00000560013	GTF2E1	P29083	439 aa	Predicted RBP	28.55	■■■□□ 2.16
TM2D3-209	ENST00000560013	SLC4A3	P48751	1232 aa		28.55	■■■□□ 2.16
TM2D3-209	ENST00000560013	RIC1	Q4ADV7	1423 aa		28.55	■■■□□ 2.16
TM2D3-209	ENST00000560013	PLSCR1	O15162	318 aa		28.55	■■■□□ 2.16
TM2D3-209	ENST00000560013	SLC10A5	Q5PT55	438 aa		28.55	■■■□□ 2.16
TM2D3-209	ENST00000560013	PROM2	Q8N271	834 aa		28.55	■■■□□ 2.16
TM2D3-209	ENST00000560013	CASZ1	Q86V15	1759 aa		28.55	■■■□□ 2.16
TM2D3-209	ENST00000560013	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	28.54	■■■□□ 2.16
TM2D3-209	ENST00000560013	HAUS7	Q99871	368 aa		28.54	■■■□□ 2.16
TM2D3-209	ENST00000560013	DIAPH3	Q9NSV4	1193 aa		28.54	■■■□□ 2.16
TM2D3-209	ENST00000560013	HIP1	O00291	1037 aa		28.53	■■■□□ 2.16
TM2D3-209	ENST00000560013	SGSM2	O43147	1006 aa		28.53	■■■□□ 2.16
TM2D3-209	ENST00000560013	NBPF5P	Q86XG9	351 aa	Predicted RBP	28.53	■■■□□ 2.16
TM2D3-209	ENST00000560013	SEC31B	Q9NQW1	1179 aa		28.53	■■■□□ 2.16
TM2D3-209	ENST00000560013	RUFY2	Q8WXA3	655 aa		28.53	■■■□□ 2.16
TM2D3-209	ENST00000560013	ANO2	Q9NQ90	1003 aa		28.53	■■■□□ 2.16
TM2D3-209	ENST00000560013	SSFA2	P28290	1259 aa		28.52	■■■□□ 2.16
TM2D3-209	ENST00000560013	SF3B3	Q15393	1217 aa	Known RBP	28.52	■■■□□ 2.16
TM2D3-209	ENST00000560013	CWC27	Q6UX04	472 aa	Known RBP	28.52	■■■□□ 2.16
TM2D3-209	ENST00000560013	TPTE2	Q6XPS3	522 aa		28.52	■■■□□ 2.16
TM2D3-209	ENST00000560013	VGLL2	Q8N8G2	317 aa		28.52	■■■□□ 2.16
TM2D3-209	ENST00000560013	MPHOSPH8	Q99549	860 aa		28.52	■■■□□ 2.16
TM2D3-209	ENST00000560013	IL25	Q9H293	177 aa		28.52	■■■□□ 2.16
TM2D3-209	ENST00000560013	EPB41L2	O43491	1005 aa	Known RBP	28.51	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms