RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 TOB2Q14106 344 aaPredicted RBP12□□□□□ -0.49
LRRC28-216ENST00000559819 RABL6Q3YEC7 729 aaPredicted RBP12□□□□□ -0.49
LRRC28-216ENST00000559819 SLFNL1Q499Z3 407 aa12□□□□□ -0.49
LRRC28-216ENST00000559819 FAM173BQ6P4H8 233 aa12□□□□□ -0.49
LRRC28-216ENST00000559819 LMBR1LQ6UX01 489 aa12□□□□□ -0.49
LRRC28-216ENST00000559819 TTLL7Q6ZT98 887 aa12□□□□□ -0.49
LRRC28-216ENST00000559819 FERMT3Q86UX7 667 aa12□□□□□ -0.49
LRRC28-216ENST00000559819 STRCP1A6NGW2 1772 aa12□□□□□ -0.49
LRRC28-216ENST00000559819 ATP5JP18859 108 aa11.99□□□□□ -0.49
LRRC28-216ENST00000559819 PSMA5P28066 241 aa11.99□□□□□ -0.49
LRRC28-216ENST00000559819 DDX46Q7L014 1031 aaKnown RBP11.99□□□□□ -0.49
LRRC28-216ENST00000559819 CDC37L1Q7L3B6 337 aa11.99□□□□□ -0.49
LRRC28-216ENST00000559819 MPNDQ8N594 471 aa11.99□□□□□ -0.49
LRRC28-216ENST00000559819 NOL7Q9UMY1 257 aaKnown RBP11.99□□□□□ -0.49
LRRC28-216ENST00000559819 GLI3P10071 1580 aa11.99□□□□□ -0.49
LRRC28-216ENST00000559819 PHF14O94880 888 aa11.99□□□□□ -0.49
LRRC28-216ENST00000559819 AFDNP55196 1824 aaKnown RBP11.98□□□□□ -0.49
LRRC28-216ENST00000559819 LARP1BQ659C4 914 aaKnown RBP11.98□□□□□ -0.49
LRRC28-216ENST00000559819 PLBD2Q8NHP8 589 aa11.98□□□□□ -0.49
LRRC28-216ENST00000559819 ZNF609O15014 1411 aa11.98□□□□□ -0.49
LRRC28-216ENST00000559819 SPATA31A3Q5VYP0 1347 aa11.98□□□□□ -0.49
LRRC28-216ENST00000559819 JCADQ9P266 1359 aa11.98□□□□□ -0.49
LRRC28-216ENST00000559819 ARFGEF2Q9Y6D5 1785 aa11.98□□□□□ -0.49
LRRC28-216ENST00000559819 HS1BP3Q53T59 392 aa11.98□□□□□ -0.49
LRRC28-216ENST00000559819 RNF20Q5VTR2 975 aa11.98□□□□□ -0.49
LRRC28-216ENST00000559819 GIMAP6Q6P9H5 292 aa11.98□□□□□ -0.49
LRRC28-216ENST00000559819 ATP6V1DQ9Y5K8 247 aa11.98□□□□□ -0.49
LRRC28-216ENST00000559819 A1BGP04217 495 aa11.97□□□□□ -0.49
LRRC28-216ENST00000559819 HCLS1P14317 486 aaPredicted RBP11.97□□□□□ -0.49
LRRC28-216ENST00000559819 FOXO4P98177 505 aa11.97□□□□□ -0.49
LRRC28-216ENST00000559819 ZBTB3Q9H5J0 574 aa11.97□□□□□ -0.49
LRRC28-216ENST00000559819 ZKSCAN5Q9Y2L8 839 aa11.97□□□□□ -0.49
LRRC28-216ENST00000559819 PKD1L3Q7Z443 1732 aa11.97□□□□□ -0.49
LRRC28-216ENST00000559819 ZNF594Q96JF6 807 aaPredicted RBP11.96□□□□□ -0.49
LRRC28-216ENST00000559819 NEUROD6Q96NK8 337 aa11.96□□□□□ -0.49
LRRC28-216ENST00000559819 LRRC2Q9BYS8 371 aa11.96□□□□□ -0.49
LRRC28-216ENST00000559819 USP25Q9UHP3 1055 aa11.96□□□□□ -0.49
LRRC28-216ENST00000559819 TTC6Q86TZ1 520 aa11.96□□□□□ -0.49
LRRC28-216ENST00000559819 CADPS2Q86UW7 1296 aa11.96□□□□□ -0.49
LRRC28-216ENST00000559819 CCDC39Q9UFE4 941 aa11.96□□□□□ -0.49
LRRC28-216ENST00000559819 JAK2O60674 1132 aa11.95□□□□□ -0.5
LRRC28-216ENST00000559819 OFD1O75665 1012 aa11.95□□□□□ -0.5
LRRC28-216ENST00000559819 HSPA2P54652 639 aa11.95□□□□□ -0.5
LRRC28-216ENST00000559819 TOM1L2Q6ZVM7 507 aa11.95□□□□□ -0.5
LRRC28-216ENST00000559819 ATG9AQ7Z3C6 839 aa11.95□□□□□ -0.5
LRRC28-216ENST00000559819 HAUS7Q99871 368 aa11.95□□□□□ -0.5
LRRC28-216ENST00000559819 ABCC6O95255 1503 aa11.95□□□□□ -0.5
LRRC28-216ENST00000559819 H7C1W4 665 aa11.95□□□□□ -0.5
LRRC28-216ENST00000559819 PTMAP06454 111 aaKnown RBP11.95□□□□□ -0.5
LRRC28-216ENST00000559819 TIMM10P62072 90 aa11.95□□□□□ -0.5
LRRC28-216ENST00000559819 ANKRD1Q15327 319 aa11.95□□□□□ -0.5
LRRC28-216ENST00000559819 LRRC24Q50LG9 513 aa11.95□□□□□ -0.5
LRRC28-216ENST00000559819 USPL1Q5W0Q7 1092 aa11.95□□□□□ -0.5
LRRC28-216ENST00000559819 HMG20BQ9P0W2 317 aa11.95□□□□□ -0.5
LRRC28-216ENST00000559819 A0A0G2JLW4 131 aa11.95□□□□□ -0.5
LRRC28-216ENST00000559819 GOLIM4O00461 696 aa11.95□□□□□ -0.5
LRRC28-216ENST00000559819 CYP21A2P08686 494 aa11.95□□□□□ -0.5
LRRC28-216ENST00000559819 ZCRB1Q8TBF4 217 aaKnown RBP11.95□□□□□ -0.5
LRRC28-216ENST00000559819 PRDM11Q9NQV5 511 aa11.95□□□□□ -0.5
LRRC28-216ENST00000559819 TSGA10IPQ3SY00 556 aa11.94□□□□□ -0.5
LRRC28-216ENST00000559819 MCMDC2Q4G0Z9 681 aa11.94□□□□□ -0.5
LRRC28-216ENST00000559819 Q6ZUG5 572 aa11.94□□□□□ -0.5
LRRC28-216ENST00000559819 STOX1Q6ZVD7 989 aa11.94□□□□□ -0.5
LRRC28-216ENST00000559819 NEK1Q96PY6 1258 aa11.94□□□□□ -0.5
LRRC28-216ENST00000559819 CWC25Q9NXE8 425 aaPredicted RBP11.94□□□□□ -0.5
LRRC28-216ENST00000559819 TFIP11Q9UBB9 837 aaKnown RBP11.94□□□□□ -0.5
LRRC28-216ENST00000559819 DCCP43146 1447 aa11.94□□□□□ -0.5
LRRC28-216ENST00000559819 ZNF500O60304 480 aaPredicted RBP11.94□□□□□ -0.5
LRRC28-216ENST00000559819 HSP90B1P14625 803 aaKnown RBP11.94□□□□□ -0.5
LRRC28-216ENST00000559819 ZNF830Q96NB3 372 aaPredicted RBP11.94□□□□□ -0.5
LRRC28-216ENST00000559819 FUCA2Q9BTY2 467 aa11.94□□□□□ -0.5
LRRC28-216ENST00000559819 ALDH8A1Q9H2A2 487 aaPredicted RBP11.94□□□□□ -0.5
LRRC28-216ENST00000559819 CPDO75976 1380 aa11.94□□□□□ -0.5
LRRC28-216ENST00000559819 LIG1P18858 919 aa11.93□□□□□ -0.5
LRRC28-216ENST00000559819 CSPP1Q1MSJ5 1256 aa11.93□□□□□ -0.5
LRRC28-216ENST00000559819 BRINP3Q76B58 766 aa11.93□□□□□ -0.5
LRRC28-216ENST00000559819 KBTBD3Q8NAB2 608 aa11.93□□□□□ -0.5
LRRC28-216ENST00000559819 PUS3Q9BZE2 481 aaKnown RBP11.93□□□□□ -0.5
LRRC28-216ENST00000559819 R3HCC1Q9Y3T6 440 aaKnown RBP11.93□□□□□ -0.5
LRRC28-216ENST00000559819 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.93□□□□□ -0.5
LRRC28-216ENST00000559819 LAMB4A4D0S4 1761 aa11.93□□□□□ -0.5
LRRC28-216ENST00000559819 PCDH11XQ9BZA7 1347 aa11.93□□□□□ -0.5
LRRC28-216ENST00000559819 PCDH11YQ9BZA8 1340 aa11.93□□□□□ -0.5
LRRC28-216ENST00000559819 LETM1O95202 739 aaPredicted RBP11.93□□□□□ -0.5
LRRC28-216ENST00000559819 ADCY5O95622 1261 aa11.93□□□□□ -0.5
LRRC28-216ENST00000559819 KRT85P78386 507 aa11.93□□□□□ -0.5
LRRC28-216ENST00000559819 DDX11Q96FC9 970 aa11.93□□□□□ -0.5
LRRC28-216ENST00000559819 ZNF330Q9Y3S2 320 aaPredicted RBP11.93□□□□□ -0.5
LRRC28-216ENST00000559819 U3KPZ7 1027 aaPredicted RBP11.93□□□□□ -0.5
LRRC28-216ENST00000559819 WDR17Q8IZU2 1322 aa11.92□□□□□ -0.5
LRRC28-216ENST00000559819 FOSBP53539 338 aa11.92□□□□□ -0.5
LRRC28-216ENST00000559819 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.92□□□□□ -0.5
LRRC28-216ENST00000559819 FAM184AQ8NB25 1140 aa11.92□□□□□ -0.5
LRRC28-216ENST00000559819 GTF3C6Q969F1 213 aa11.92□□□□□ -0.5
LRRC28-216ENST00000559819 CCDC85AQ96PX6 553 aaPredicted RBP11.92□□□□□ -0.5
LRRC28-216ENST00000559819 PAG1Q9NWQ8 432 aa11.92□□□□□ -0.5
LRRC28-216ENST00000559819 AP5Z1O43299 807 aa11.92□□□□□ -0.5
LRRC28-216ENST00000559819 PLCB2Q00722 1185 aa11.92□□□□□ -0.5
LRRC28-216ENST00000559819 KRT32Q14532 448 aa11.92□□□□□ -0.5
LRRC28-216ENST00000559819 CAMK4Q16566 473 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms