RNA–Protein interactions for RNA: ENST00000559255.1

TNFAIP2-204, Transcript of TNF alpha induced protein 2, humanhuman

TSL 2

Gene TNFAIP2, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-204ENST00000559255 FAM161AQ3B820 660 aa18.47■□□□□ 0.55
TNFAIP2-204ENST00000559255 ERC1Q8IUD2 1116 aa18.47■□□□□ 0.55
TNFAIP2-204ENST00000559255 BCL11AQ9H165 835 aa18.47■□□□□ 0.55
TNFAIP2-204ENST00000559255 NIP7Q9Y221 180 aaKnown RBP eCLIP18.47■□□□□ 0.55
TNFAIP2-204ENST00000559255 CHMP3Q9Y3E7 222 aa18.47■□□□□ 0.55
TNFAIP2-204ENST00000559255 ZPR1O75312 459 aa18.46■□□□□ 0.55
TNFAIP2-204ENST00000559255 C16orf71Q8IYS4 520 aaPredicted RBP18.46■□□□□ 0.55
TNFAIP2-204ENST00000559255 RHPN1Q8TCX5 695 aa18.46■□□□□ 0.55
TNFAIP2-204ENST00000559255 ADRA2BP18089 450 aa18.45■□□□□ 0.54
TNFAIP2-204ENST00000559255 RFX5P48382 616 aaPredicted RBP18.45■□□□□ 0.54
TNFAIP2-204ENST00000559255 G3BP1Q13283 466 aaKnown RBP eCLIP18.45■□□□□ 0.54
TNFAIP2-204ENST00000559255 TRAPPC3LQ5T215 181 aa18.45■□□□□ 0.54
TNFAIP2-204ENST00000559255 SUSD4Q5VX71 490 aa18.45■□□□□ 0.54
TNFAIP2-204ENST00000559255 USPL1Q5W0Q7 1092 aa18.45■□□□□ 0.54
TNFAIP2-204ENST00000559255 PLEKHM2Q8IWE5 1019 aa18.45■□□□□ 0.54
TNFAIP2-204ENST00000559255 ARHGEF1Q92888 912 aaKnown RBP18.45■□□□□ 0.54
TNFAIP2-204ENST00000559255 UTP14AQ9BVJ6 771 aaKnown RBP18.45■□□□□ 0.54
TNFAIP2-204ENST00000559255 BACH2Q9BYV9 841 aa18.45■□□□□ 0.54
TNFAIP2-204ENST00000559255 COPRSQ9NQ92 184 aa18.45■□□□□ 0.54
TNFAIP2-204ENST00000559255 IRS4O14654 1257 aaPredicted RBP18.44■□□□□ 0.54
TNFAIP2-204ENST00000559255 SRP68Q9UHB9 627 aaKnown RBP18.44■□□□□ 0.54
TNFAIP2-204ENST00000559255 SH3TC1Q8TE82 1336 aa18.43■□□□□ 0.54
TNFAIP2-204ENST00000559255 RFC4P35249 363 aa18.43■□□□□ 0.54
TNFAIP2-204ENST00000559255 PTPN12Q05209 780 aaKnown RBP18.43■□□□□ 0.54
TNFAIP2-204ENST00000559255 C8orf34Q49A92 452 aa18.43■□□□□ 0.54
TNFAIP2-204ENST00000559255 SYNE4Q8N205 404 aa18.43■□□□□ 0.54
TNFAIP2-204ENST00000559255 OTUD7AQ8TE49 926 aaPredicted RBP18.43■□□□□ 0.54
TNFAIP2-204ENST00000559255 BCL2L12Q9HB09 334 aa18.43■□□□□ 0.54
TNFAIP2-204ENST00000559255 IL1RAPL2Q9NP60 686 aa18.43■□□□□ 0.54
TNFAIP2-204ENST00000559255 USP42Q9H9J4 1324 aaKnown RBP18.42■□□□□ 0.54
TNFAIP2-204ENST00000559255 PDE8AO60658 829 aa18.42■□□□□ 0.54
TNFAIP2-204ENST00000559255 C1QTNF8P60827 252 aa18.42■□□□□ 0.54
TNFAIP2-204ENST00000559255 KLHDC4Q8TBB5 520 aa18.42■□□□□ 0.54
TNFAIP2-204ENST00000559255 SIL1Q9H173 461 aa18.42■□□□□ 0.54
TNFAIP2-204ENST00000559255 BRCA1P38398 1863 aaKnown RBP18.42■□□□□ 0.54
TNFAIP2-204ENST00000559255 FAM177BA6PVY3 158 aa18.41■□□□□ 0.54
TNFAIP2-204ENST00000559255 NTSR2O95665 410 aa18.41■□□□□ 0.54
TNFAIP2-204ENST00000559255 CSF1RP07333 972 aa18.41■□□□□ 0.54
TNFAIP2-204ENST00000559255 HSP90B1P14625 803 aaKnown RBP18.41■□□□□ 0.54
TNFAIP2-204ENST00000559255 CTSWP56202 376 aa18.41■□□□□ 0.54
TNFAIP2-204ENST00000559255 BMP2KLQ5H9B9 411 aa18.41■□□□□ 0.54
TNFAIP2-204ENST00000559255 SALL3Q9BXA9 1300 aa18.41■□□□□ 0.54
TNFAIP2-204ENST00000559255 MYH3P11055 1940 aa18.41■□□□□ 0.54
TNFAIP2-204ENST00000559255 MMP10P09238 476 aa18.4■□□□□ 0.54
TNFAIP2-204ENST00000559255 CCDC57Q2TAC2 916 aa18.4■□□□□ 0.54
TNFAIP2-204ENST00000559255 TBC1D9BQ66K14 1250 aa18.4■□□□□ 0.54
TNFAIP2-204ENST00000559255 CLASRPQ8N2M8 674 aaKnown RBP18.4■□□□□ 0.54
TNFAIP2-204ENST00000559255 SASH1O94885 1247 aa18.4■□□□□ 0.54
TNFAIP2-204ENST00000559255 MX1P20591 662 aa18.4■□□□□ 0.54
TNFAIP2-204ENST00000559255 PDE1AP54750 535 aa18.4■□□□□ 0.54
TNFAIP2-204ENST00000559255 OSBPL3Q9H4L5 887 aa18.4■□□□□ 0.54
TNFAIP2-204ENST00000559255 GYS1P13807 737 aa18.39■□□□□ 0.53
TNFAIP2-204ENST00000559255 TTC22Q5TAA0 569 aa18.39■□□□□ 0.53
TNFAIP2-204ENST00000559255 BICDL1Q6ZP65 573 aa18.39■□□□□ 0.53
TNFAIP2-204ENST00000559255 NLGN1Q8N2Q7 840 aa18.39■□□□□ 0.53
TNFAIP2-204ENST00000559255 TTLL11Q8NHH1 800 aa18.39■□□□□ 0.53
TNFAIP2-204ENST00000559255 SETDB2Q96T68 719 aa18.39■□□□□ 0.53
TNFAIP2-204ENST00000559255 LAMB2P55268 1798 aa18.38■□□□□ 0.53
TNFAIP2-204ENST00000559255 C10orf71Q711Q0 1435 aa18.38■□□□□ 0.53
TNFAIP2-204ENST00000559255 HCLS1P14317 486 aaPredicted RBP18.38■□□□□ 0.53
TNFAIP2-204ENST00000559255 IFIT5Q13325 482 aaKnown RBP18.38■□□□□ 0.53
TNFAIP2-204ENST00000559255 CCDC85AQ96PX6 553 aaPredicted RBP18.38■□□□□ 0.53
TNFAIP2-204ENST00000559255 NYXQ9GZU5 481 aa18.38■□□□□ 0.53
TNFAIP2-204ENST00000559255 STAP2Q9UGK3 403 aa18.38■□□□□ 0.53
TNFAIP2-204ENST00000559255 AOX1Q06278 1338 aa18.37■□□□□ 0.53
TNFAIP2-204ENST00000559255 GSPT1P15170 499 aaKnown RBP18.37■□□□□ 0.53
TNFAIP2-204ENST00000559255 TAF7LQ5H9L4 462 aa18.37■□□□□ 0.53
TNFAIP2-204ENST00000559255 NUTM1Q86Y26 1132 aa18.37■□□□□ 0.53
TNFAIP2-204ENST00000559255 RBM19Q9Y4C8 960 aaKnown RBP18.37■□□□□ 0.53
TNFAIP2-204ENST00000559255 DDX60Q8IY21 1712 aaKnown RBP18.37■□□□□ 0.53
TNFAIP2-204ENST00000559255 CIAO1O76071 339 aa18.36■□□□□ 0.53
TNFAIP2-204ENST00000559255 ZNF594Q96JF6 807 aaPredicted RBP18.36■□□□□ 0.53
TNFAIP2-204ENST00000559255 GREM2Q9H772 168 aa18.36■□□□□ 0.53
TNFAIP2-204ENST00000559255 FBXO3Q9UK99 471 aa18.36■□□□□ 0.53
TNFAIP2-204ENST00000559255 ANKRD18BA2A2Z9 1011 aa18.35■□□□□ 0.53
TNFAIP2-204ENST00000559255 EYA2O00167 538 aa18.35■□□□□ 0.53
TNFAIP2-204ENST00000559255 IFIT2P09913 472 aaKnown RBP18.35■□□□□ 0.53
TNFAIP2-204ENST00000559255 ITGA6P23229 1130 aa18.35■□□□□ 0.53
TNFAIP2-204ENST00000559255 IL15P40933 162 aaPredicted RBP18.35■□□□□ 0.53
TNFAIP2-204ENST00000559255 AACSQ86V21 672 aa18.35■□□□□ 0.53
TNFAIP2-204ENST00000559255 GTF2E1P29083 439 aaPredicted RBP18.34■□□□□ 0.53
TNFAIP2-204ENST00000559255 TGFB2P61812 414 aa18.34■□□□□ 0.53
TNFAIP2-204ENST00000559255 TFCP2Q12800 502 aa18.34■□□□□ 0.53
TNFAIP2-204ENST00000559255 ERFEQ4G0M1 354 aa18.34■□□□□ 0.53
TNFAIP2-204ENST00000559255 TSHZ3Q63HK5 1081 aa18.34■□□□□ 0.53
TNFAIP2-204ENST00000559255 ATG9AQ7Z3C6 839 aa18.34■□□□□ 0.53
TNFAIP2-204ENST00000559255 NBPF5PQ86XG9 351 aaPredicted RBP18.34■□□□□ 0.53
TNFAIP2-204ENST00000559255 GPATCH3Q96I76 525 aa18.34■□□□□ 0.53
TNFAIP2-204ENST00000559255 CARMIL3Q8ND23 1372 aa18.34■□□□□ 0.53
TNFAIP2-204ENST00000559255 ARFGEF1Q9Y6D6 1849 aa18.33■□□□□ 0.53
TNFAIP2-204ENST00000559255 CCDC152Q4G0S7 254 aa18.33■□□□□ 0.53
TNFAIP2-204ENST00000559255 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.33■□□□□ 0.53
TNFAIP2-204ENST00000559255 RTL9Q8NET4 1388 aa18.33■□□□□ 0.52
TNFAIP2-204ENST00000559255 LRRC24Q50LG9 513 aa18.32■□□□□ 0.52
TNFAIP2-204ENST00000559255 TPTE2Q6XPS3 522 aa18.32■□□□□ 0.52
TNFAIP2-204ENST00000559255 EAF2Q96CJ1 260 aaPredicted RBP18.32■□□□□ 0.52
TNFAIP2-204ENST00000559255 TTC41PQ6P2S7 1318 aa18.32■□□□□ 0.52
TNFAIP2-204ENST00000559255 ABCC12Q96J65 1359 aa18.32■□□□□ 0.52
TNFAIP2-204ENST00000559255 NFIXQ14938 502 aa18.32■□□□□ 0.52
TNFAIP2-204ENST00000559255 TNNI3KQ59H18 835 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms