RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 LMBRD2Q68DH5 695 aaPredicted RBP7.02□□□□□ -1.29
CTDSPL2-206ENST00000559175 RIC3Q7Z5B4 369 aa7.02□□□□□ -1.29
CTDSPL2-206ENST00000559175 RPAINQ86UA6 219 aa7.02□□□□□ -1.29
CTDSPL2-206ENST00000559175 MYRIPQ8NFW9 859 aa7.02□□□□□ -1.29
CTDSPL2-206ENST00000559175 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.02□□□□□ -1.29
CTDSPL2-206ENST00000559175 PCDHB15Q9Y5E8 787 aa7.02□□□□□ -1.29
CTDSPL2-206ENST00000559175 ANKRD26Q9UPS8 1709 aa7.02□□□□□ -1.29
CTDSPL2-206ENST00000559175 TRAPPC10P48553 1259 aa7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 CABLES1Q8TDN4 633 aa7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 HOMER2Q9NSB8 354 aa7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 NLRP2Q9NX02 1062 aa7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 STK26Q9P289 416 aa7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 ABCA3Q99758 1704 aa7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 WNK3Q9BYP7 1800 aa7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 NUTM2BA6NNL0 878 aaPredicted RBP7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 NUTM2EB1AL46 878 aaPredicted RBP7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 RNASEH2AO75792 299 aaKnown RBP7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 ATF3P18847 181 aa7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 TDO2P48775 406 aa7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 CDKN1CP49918 316 aaPredicted RBP7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 PPP2R5AQ15172 486 aa7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 ALDH1L2Q3SY69 923 aa7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 NUTM2DQ5VT03 806 aaPredicted RBP7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 NUTM2AQ8IVF1 878 aaPredicted RBP7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 CHMP4CQ96CF2 233 aa7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 PARP2Q9UGN5 583 aa7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 DAAM1Q9Y4D1 1078 aa7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 TBX3O15119 743 aa7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 ATP9BO43861 1147 aa7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 VDRP11473 427 aa7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 FAM69CQ0P6D2 419 aa7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 CCDC92Q53HC0 331 aaPredicted RBP7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 CHPFQ8IZ52 775 aa7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 ALDH8A1Q9H2A2 487 aaPredicted RBP7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 ARNT2Q9HBZ2 717 aa7.01□□□□□ -1.29
CTDSPL2-206ENST00000559175 CCDC89Q8N998 374 aa7□□□□□ -1.29
CTDSPL2-206ENST00000559175 CERKQ8TCT0 537 aa7□□□□□ -1.29
CTDSPL2-206ENST00000559175 ZNF594Q96JF6 807 aaPredicted RBP7□□□□□ -1.29
CTDSPL2-206ENST00000559175 DUSP9Q99956 384 aaKnown RBP7□□□□□ -1.29
CTDSPL2-206ENST00000559175 RAPGEF1Q13905 1077 aa7□□□□□ -1.29
CTDSPL2-206ENST00000559175 ZSCAN30Q86W11 494 aa7□□□□□ -1.29
CTDSPL2-206ENST00000559175 ZSCAN29Q8IWY8 852 aaPredicted RBP7□□□□□ -1.29
CTDSPL2-206ENST00000559175 SLC39A13Q96H72 371 aa7□□□□□ -1.29
CTDSPL2-206ENST00000559175 ZFYVE9O95405 1425 aa7□□□□□ -1.29
CTDSPL2-206ENST00000559175 RACK1P63244 317 aaKnown RBP7□□□□□ -1.29
CTDSPL2-206ENST00000559175 ZBED6P86452 979 aa7□□□□□ -1.29
CTDSPL2-206ENST00000559175 NFE2L2Q16236 605 aa7□□□□□ -1.29
CTDSPL2-206ENST00000559175 SLC43A3Q8NBI5 491 aa7□□□□□ -1.29
CTDSPL2-206ENST00000559175 PPM1EQ8WY54 764 aa7□□□□□ -1.29
CTDSPL2-206ENST00000559175 CDHR5Q9HBB8 845 aa7□□□□□ -1.29
CTDSPL2-206ENST00000559175 NEUROD4Q9HD90 331 aa7□□□□□ -1.29
CTDSPL2-206ENST00000559175 NOL7Q9UMY1 257 aaKnown RBP7□□□□□ -1.29
CTDSPL2-206ENST00000559175 MRPS23Q9Y3D9 190 aaKnown RBP7□□□□□ -1.29
CTDSPL2-206ENST00000559175 SMAP1Q8IYB5 467 aaPredicted RBP6.99□□□□□ -1.29
CTDSPL2-206ENST00000559175 CHCHD4Q8N4Q1 142 aa6.99□□□□□ -1.29
CTDSPL2-206ENST00000559175 MS4A4AQ96JQ5 239 aa6.99□□□□□ -1.29
CTDSPL2-206ENST00000559175 CXorf56Q9H5V9 222 aa6.99□□□□□ -1.29
CTDSPL2-206ENST00000559175 CASS4Q9NQ75 786 aa6.99□□□□□ -1.29
CTDSPL2-206ENST00000559175 DCTN4Q9UJW0 460 aa6.99□□□□□ -1.29
CTDSPL2-206ENST00000559175 CPS1P31327 1500 aa6.99□□□□□ -1.29
CTDSPL2-206ENST00000559175 NCOA3Q9Y6Q9 1424 aa6.99□□□□□ -1.29
CTDSPL2-206ENST00000559175 TGFB3P10600 412 aa6.99□□□□□ -1.29
CTDSPL2-206ENST00000559175 CCDC34Q96HJ3 373 aa6.99□□□□□ -1.29
CTDSPL2-206ENST00000559175 SEPT3Q9UH03 358 aa6.99□□□□□ -1.29
CTDSPL2-206ENST00000559175 A2ML1A8K2U0 1454 aa6.99□□□□□ -1.29
CTDSPL2-206ENST00000559175 SCGB1D2O95969 90 aa6.99□□□□□ -1.29
CTDSPL2-206ENST00000559175 Q3C1V9 767 aa6.99□□□□□ -1.29
CTDSPL2-206ENST00000559175 EP400NLQ6ZTU2 488 aa6.99□□□□□ -1.29
CTDSPL2-206ENST00000559175 PRIMPOLQ96LW4 560 aa6.99□□□□□ -1.29
CTDSPL2-206ENST00000559175 SLKQ9H2G2 1235 aaPredicted RBP6.99□□□□□ -1.29
CTDSPL2-206ENST00000559175 SLC45A1Q9Y2W3 748 aa6.99□□□□□ -1.29
CTDSPL2-206ENST00000559175 IPO8O15397 1037 aaKnown RBP6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 CDC45O75419 566 aa6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 PRR29P0C7W0 189 aa6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 RUNDC1Q96C34 613 aa6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 TSPYL2Q9H2G4 693 aaPredicted RBP6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 PNNQ9H307 717 aaKnown RBP6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 ARHGAP5Q13017 1502 aa6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 RGPD3A6NKT7 1758 aaPredicted RBP6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 RGPD4Q7Z3J3 1758 aa6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 USP17L3A6NCW0 530 aa6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 USP17L4A6NCW7 530 aa6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 MPHOSPH10O00566 681 aaKnown RBP6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 IGHDP01880 384 aa6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 MAN1A1P33908 653 aa6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 DSG2Q14126 1118 aa6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 USP17L2Q6R6M4 530 aa6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 CAPN12Q6ZSI9 719 aa6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 USP17L1Q7RTZ2 530 aa6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 TTC30AQ86WT1 665 aa6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 RNF217Q8TC41 542 aa6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 UPF1Q92900 1129 aaKnown RBP eCLIP6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 APBA2Q99767 749 aa6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 IFT122Q9HBG6 1241 aa6.98□□□□□ -1.29
CTDSPL2-206ENST00000559175 SORBS3O60504 671 aa6.97□□□□□ -1.29
CTDSPL2-206ENST00000559175 C21orf62-AS1Q17RA5 79 aa6.97□□□□□ -1.29
CTDSPL2-206ENST00000559175 GRAMD1BQ3KR37 738 aa6.97□□□□□ -1.29
CTDSPL2-206ENST00000559175 HDGFL2Q7Z4V5 671 aaPredicted RBP6.97□□□□□ -1.29
CTDSPL2-206ENST00000559175 L3MBTL3Q96JM7 780 aaPredicted RBP6.97□□□□□ -1.29
CTDSPL2-206ENST00000559175 GMLQ99445 158 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms