RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 MKL2Q9ULH7 1088 aa7.1□□□□□ -1.27
VPS13C-207ENST00000558919 FNDC3AQ9Y2H6 1198 aaKnown RBP7.1□□□□□ -1.27
VPS13C-207ENST00000558919 CNTNAP5Q8WYK1 1306 aa7.09□□□□□ -1.27
VPS13C-207ENST00000558919 PIK3R2O00459 728 aa7.09□□□□□ -1.27
VPS13C-207ENST00000558919 FAM13AO94988 1023 aa7.09□□□□□ -1.27
VPS13C-207ENST00000558919 ABL1P00519 1130 aa7.09□□□□□ -1.27
VPS13C-207ENST00000558919 RPLP1P05386 114 aaKnown RBP7.09□□□□□ -1.27
VPS13C-207ENST00000558919 EIF1AXP47813 144 aaKnown RBP7.09□□□□□ -1.27
VPS13C-207ENST00000558919 DGKGP49619 791 aa7.09□□□□□ -1.27
VPS13C-207ENST00000558919 SNRPNP63162 240 aaKnown RBP7.09□□□□□ -1.27
VPS13C-207ENST00000558919 MTMR3Q13615 1198 aa7.09□□□□□ -1.27
VPS13C-207ENST00000558919 TRIP4Q15650 581 aaPredicted RBP7.09□□□□□ -1.27
VPS13C-207ENST00000558919 KRT25Q7Z3Z0 450 aa7.09□□□□□ -1.27
VPS13C-207ENST00000558919 TXNDC2Q86VQ3 553 aa7.09□□□□□ -1.27
VPS13C-207ENST00000558919 GPR152Q8TDT2 470 aa7.09□□□□□ -1.27
VPS13C-207ENST00000558919 UBAP1LF5GYI3 381 aa7.08□□□□□ -1.28
VPS13C-207ENST00000558919 BRD1O95696 1058 aa7.08□□□□□ -1.28
VPS13C-207ENST00000558919 LINC00114Q6XXX2 140 aa7.08□□□□□ -1.28
VPS13C-207ENST00000558919 DHX32Q7L7V1 743 aaKnown RBP7.08□□□□□ -1.28
VPS13C-207ENST00000558919 NLRP13Q86W25 1043 aa7.08□□□□□ -1.28
VPS13C-207ENST00000558919 IGFLR1Q9H665 355 aa7.08□□□□□ -1.28
VPS13C-207ENST00000558919 DNAJB12Q9NXW2 375 aaKnown RBP7.08□□□□□ -1.28
VPS13C-207ENST00000558919 ZNF211Q13398 564 aaPredicted RBP7.07□□□□□ -1.28
VPS13C-207ENST00000558919 ATCAYQ86WG3 371 aa7.07□□□□□ -1.28
VPS13C-207ENST00000558919 CCER1Q8TC90 406 aaPredicted RBP7.07□□□□□ -1.28
VPS13C-207ENST00000558919 TRPM4Q8TD43 1214 aa7.07□□□□□ -1.28
VPS13C-207ENST00000558919 EDEM1Q92611 657 aa7.07□□□□□ -1.28
VPS13C-207ENST00000558919 TLR7Q9NYK1 1049 aaKnown RBP7.07□□□□□ -1.28
VPS13C-207ENST00000558919 SLC6A14Q9UN76 642 aa7.07□□□□□ -1.28
VPS13C-207ENST00000558919 STARD13Q9Y3M8 1113 aa7.07□□□□□ -1.28
VPS13C-207ENST00000558919 ICMTO60725 284 aa7.06□□□□□ -1.28
VPS13C-207ENST00000558919 PCSK2P16519 638 aa7.06□□□□□ -1.28
VPS13C-207ENST00000558919 MZF1P28698 734 aaPredicted RBP7.06□□□□□ -1.28
VPS13C-207ENST00000558919 IRS1P35568 1242 aa7.06□□□□□ -1.28
VPS13C-207ENST00000558919 SOX18P35713 384 aa7.06□□□□□ -1.28
VPS13C-207ENST00000558919 SERPINB4P48594 390 aa7.06□□□□□ -1.28
VPS13C-207ENST00000558919 GSK3AP49840 483 aa7.06□□□□□ -1.28
VPS13C-207ENST00000558919 NRLP54845 237 aa7.06□□□□□ -1.28
VPS13C-207ENST00000558919 GPLD1P80108 840 aa7.06□□□□□ -1.28
VPS13C-207ENST00000558919 TBC1D8BQ0IIM8 1120 aa7.06□□□□□ -1.28
VPS13C-207ENST00000558919 MICALL1Q8N3F8 863 aa7.06□□□□□ -1.28
VPS13C-207ENST00000558919 NUDT16Q96DE0 195 aaKnown RBP7.06□□□□□ -1.28
VPS13C-207ENST00000558919 PRDM6Q9NQX0 595 aa7.06□□□□□ -1.28
VPS13C-207ENST00000558919 ZBTB42B2RXF5 422 aa7.05□□□□□ -1.28
VPS13C-207ENST00000558919 M0R082 166 aa7.05□□□□□ -1.28
VPS13C-207ENST00000558919 GNB5O14775 395 aa7.05□□□□□ -1.28
VPS13C-207ENST00000558919 MMP20O60882 483 aa7.05□□□□□ -1.28
VPS13C-207ENST00000558919 PDGFAP04085 211 aa7.05□□□□□ -1.28
VPS13C-207ENST00000558919 PSAPP07602 524 aa7.05□□□□□ -1.28
VPS13C-207ENST00000558919 HOXD8P13378 290 aaPredicted RBP7.05□□□□□ -1.28
VPS13C-207ENST00000558919 PLAURQ03405 335 aa7.05□□□□□ -1.28
VPS13C-207ENST00000558919 DNM1Q05193 864 aaKnown RBP7.05□□□□□ -1.28
VPS13C-207ENST00000558919 PDE12Q6L8Q7 609 aaKnown RBP7.05□□□□□ -1.28
VPS13C-207ENST00000558919 XKR5Q6UX68 686 aa7.05□□□□□ -1.28
VPS13C-207ENST00000558919 C20orf204Q6ZNR8 217 aa7.05□□□□□ -1.28
VPS13C-207ENST00000558919 ZNF417Q8TAU3 575 aa7.05□□□□□ -1.28
VPS13C-207ENST00000558919 ZNF587Q96SQ5 575 aaPredicted RBP7.05□□□□□ -1.28
VPS13C-207ENST00000558919 ANO2Q9NQ90 1003 aa7.05□□□□□ -1.28
VPS13C-207ENST00000558919 GNEQ9Y223 722 aaKnown RBP7.05□□□□□ -1.28
VPS13C-207ENST00000558919 ALBP02768 609 aa7.04□□□□□ -1.28
VPS13C-207ENST00000558919 RASSF7Q02833 373 aa7.04□□□□□ -1.28
VPS13C-207ENST00000558919 AAMPQ13685 434 aa7.04□□□□□ -1.28
VPS13C-207ENST00000558919 TRAIPQ9BWF2 469 aa7.04□□□□□ -1.28
VPS13C-207ENST00000558919 FRRS1LQ9P0K9 344 aa7.04□□□□□ -1.28
VPS13C-207ENST00000558919 H3BRB1 525 aa7.03□□□□□ -1.28
VPS13C-207ENST00000558919 FZD6O60353 706 aa7.03□□□□□ -1.28
VPS13C-207ENST00000558919 USP5P45974 858 aa7.03□□□□□ -1.28
VPS13C-207ENST00000558919 TTC39BQ5VTQ0 682 aaPredicted RBP7.03□□□□□ -1.28
VPS13C-207ENST00000558919 FAM35AQ86V20 835 aa7.03□□□□□ -1.28
VPS13C-207ENST00000558919 ALYREFQ86V81 257 aaKnown RBP7.03□□□□□ -1.28
VPS13C-207ENST00000558919 GLYCTKQ8IVS8 523 aa7.03□□□□□ -1.28
VPS13C-207ENST00000558919 TTC16Q8NEE8 873 aa7.03□□□□□ -1.28
VPS13C-207ENST00000558919 OR13H1Q8NG92 308 aa7.03□□□□□ -1.28
VPS13C-207ENST00000558919 GGNBP2Q9H3C7 697 aa7.03□□□□□ -1.28
VPS13C-207ENST00000558919 TUT1Q9H6E5 874 aaKnown RBP7.03□□□□□ -1.28
VPS13C-207ENST00000558919 NOP53Q9NZM5 478 aaKnown RBP7.03□□□□□ -1.28
VPS13C-207ENST00000558919 POLIQ9UNA4 740 aa7.03□□□□□ -1.28
VPS13C-207ENST00000558919 LILRB5O75023 590 aa7.02□□□□□ -1.29
VPS13C-207ENST00000558919 EHHADHQ08426 723 aa7.02□□□□□ -1.29
VPS13C-207ENST00000558919 ECM1Q16610 540 aa7.02□□□□□ -1.29
VPS13C-207ENST00000558919 PSAPL1Q6NUJ1 521 aa7.02□□□□□ -1.29
VPS13C-207ENST00000558919 ZNF438Q7Z4V0 828 aa7.02□□□□□ -1.29
VPS13C-207ENST00000558919 TMEM151AQ8N4L1 468 aa7.02□□□□□ -1.29
VPS13C-207ENST00000558919 TTC9Q92623 222 aa7.02□□□□□ -1.29
VPS13C-207ENST00000558919 ELP3Q9H9T3 547 aa7.02□□□□□ -1.29
VPS13C-207ENST00000558919 ABI2Q9NYB9 513 aaPredicted RBP7.02□□□□□ -1.29
VPS13C-207ENST00000558919 NAGPAQ9UK23 515 aa7.02□□□□□ -1.29
VPS13C-207ENST00000558919 LOC102724428A0A0B4J2F2 783 aa7.01□□□□□ -1.29
VPS13C-207ENST00000558919 RGS9O75916 674 aaPredicted RBP7.01□□□□□ -1.29
VPS13C-207ENST00000558919 GDF11O95390 407 aa7.01□□□□□ -1.29
VPS13C-207ENST00000558919 CPB1P15086 417 aa7.01□□□□□ -1.29
VPS13C-207ENST00000558919 SIK1P57059 783 aa7.01□□□□□ -1.29
VPS13C-207ENST00000558919 MLLT1Q03111 559 aaPredicted RBP7.01□□□□□ -1.29
VPS13C-207ENST00000558919 COL9A3Q14050 684 aaPredicted RBP7.01□□□□□ -1.29
VPS13C-207ENST00000558919 C8orf34Q49A92 452 aa7.01□□□□□ -1.29
VPS13C-207ENST00000558919 C8orf86Q6ZUL3 223 aa7.01□□□□□ -1.29
VPS13C-207ENST00000558919 TRIM11Q96F44 468 aa7.01□□□□□ -1.29
VPS13C-207ENST00000558919 LPIN3Q9BQK8 851 aa7.01□□□□□ -1.29
VPS13C-207ENST00000558919 JPH1Q9HDC5 661 aaPredicted RBP7.01□□□□□ -1.29
VPS13C-207ENST00000558919 TMEM63CQ9P1W3 806 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms