RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 EPB42P16452 691 aa5.7□□□□□ -1.5
LRRC28-212ENST00000558911 HDGFL1Q5TGJ6 251 aa5.7□□□□□ -1.5
LRRC28-212ENST00000558911 IGF2-ASQ6U949 168 aa5.7□□□□□ -1.5
LRRC28-212ENST00000558911 DHX32Q7L7V1 743 aaKnown RBP5.7□□□□□ -1.5
LRRC28-212ENST00000558911 C2orf49Q9BVC5 232 aaPredicted RBP5.7□□□□□ -1.5
LRRC28-212ENST00000558911 KLK14Q9P0G3 267 aa5.7□□□□□ -1.5
LRRC28-212ENST00000558911 ZFATQ9P243 1243 aa5.7□□□□□ -1.5
LRRC28-212ENST00000558911 TGFBR3LH3BV60 316 aa5.69□□□□□ -1.5
LRRC28-212ENST00000558911 PAX4O43316 350 aa5.69□□□□□ -1.5
LRRC28-212ENST00000558911 RAD21O60216 631 aa5.69□□□□□ -1.5
LRRC28-212ENST00000558911 RARAP10276 462 aa5.69□□□□□ -1.5
LRRC28-212ENST00000558911 EIF2AK2P19525 551 aaKnown RBP5.69□□□□□ -1.5
LRRC28-212ENST00000558911 FSTP19883 344 aa5.69□□□□□ -1.5
LRRC28-212ENST00000558911 IDH3AP50213 366 aa5.69□□□□□ -1.5
LRRC28-212ENST00000558911 GRIK5Q16478 980 aa5.69□□□□□ -1.5
LRRC28-212ENST00000558911 PCSK7Q16549 785 aa5.69□□□□□ -1.5
LRRC28-212ENST00000558911 GDF6Q6KF10 455 aaPredicted RBP5.69□□□□□ -1.5
LRRC28-212ENST00000558911 PLEKHM2Q8IWE5 1019 aa5.69□□□□□ -1.5
LRRC28-212ENST00000558911 DTWD1Q8N5C7 304 aa5.69□□□□□ -1.5
LRRC28-212ENST00000558911 ADAMTS19Q8TE59 1207 aa5.69□□□□□ -1.5
LRRC28-212ENST00000558911 AKTIPQ9H8T0 292 aa5.69□□□□□ -1.5
LRRC28-212ENST00000558911 EFCC1Q9HA90 598 aa5.69□□□□□ -1.5
LRRC28-212ENST00000558911 BCS1LQ9Y276 419 aa5.69□□□□□ -1.5
LRRC28-212ENST00000558911 USP20Q9Y2K6 914 aa5.69□□□□□ -1.5
LRRC28-212ENST00000558911 M0R2N6 131 aa5.68□□□□□ -1.5
LRRC28-212ENST00000558911 ATP9BO43861 1147 aa5.68□□□□□ -1.5
LRRC28-212ENST00000558911 COBLO75128 1261 aa5.68□□□□□ -1.5
LRRC28-212ENST00000558911 DEAF1O75398 565 aaPredicted RBP5.68□□□□□ -1.5
LRRC28-212ENST00000558911 RTN1Q16799 776 aa5.68□□□□□ -1.5
LRRC28-212ENST00000558911 POTEAQ6S8J7 498 aa5.68□□□□□ -1.5
LRRC28-212ENST00000558911 AGGF1Q8N302 714 aaeCLIP5.68□□□□□ -1.5
LRRC28-212ENST00000558911 IFT43Q96FT9 208 aa5.68□□□□□ -1.5
LRRC28-212ENST00000558911 UCN2Q96RP3 112 aa5.68□□□□□ -1.5
LRRC28-212ENST00000558911 J3QW42 95 aa5.67□□□□□ -1.5
LRRC28-212ENST00000558911 PTCD1O75127 700 aaKnown RBP5.67□□□□□ -1.5
LRRC28-212ENST00000558911 GRNP28799 593 aaKnown RBP5.67□□□□□ -1.5
LRRC28-212ENST00000558911 IRAK1P51617 712 aa5.67□□□□□ -1.5
LRRC28-212ENST00000558911 DGKZQ13574 1117 aa5.67□□□□□ -1.5
LRRC28-212ENST00000558911 SIX5Q8N196 739 aa5.67□□□□□ -1.5
LRRC28-212ENST00000558911 FRRS1LQ9P0K9 344 aa5.67□□□□□ -1.5
LRRC28-212ENST00000558911 GLB1P16278 677 aa5.66□□□□□ -1.5
LRRC28-212ENST00000558911 SEC13P55735 322 aa5.66□□□□□ -1.5
LRRC28-212ENST00000558911 IER5Q5VY09 327 aa5.66□□□□□ -1.5
LRRC28-212ENST00000558911 DMGDHQ9UI17 866 aaKnown RBP5.66□□□□□ -1.5
LRRC28-212ENST00000558911 INPP5BP32019 993 aa5.65□□□□□ -1.5
LRRC28-212ENST00000558911 TXKP42681 527 aa5.65□□□□□ -1.5
LRRC28-212ENST00000558911 GPLD1P80108 840 aa5.65□□□□□ -1.5
LRRC28-212ENST00000558911 STAG2Q8N3U4 1231 aa5.65□□□□□ -1.5
LRRC28-212ENST00000558911 TRPM4Q8TD43 1214 aa5.65□□□□□ -1.5
LRRC28-212ENST00000558911 NSUN5Q96P11 429 aaKnown RBP5.65□□□□□ -1.5
LRRC28-212ENST00000558911 COL17A1Q9UMD9 1497 aaPredicted RBP5.64□□□□□ -1.51
LRRC28-212ENST00000558911 DLL1O00548 723 aa5.64□□□□□ -1.51
LRRC28-212ENST00000558911 DKK1O94907 266 aa5.64□□□□□ -1.51
LRRC28-212ENST00000558911 MAP3K6O95382 1288 aa5.64□□□□□ -1.51
LRRC28-212ENST00000558911 TGFB1P01137 390 aa5.64□□□□□ -1.51
LRRC28-212ENST00000558911 TAL1P17542 331 aaPredicted RBP5.64□□□□□ -1.51
LRRC28-212ENST00000558911 ARID4AP29374 1257 aaPredicted RBP5.64□□□□□ -1.51
LRRC28-212ENST00000558911 ARSDP51689 593 aa5.64□□□□□ -1.51
LRRC28-212ENST00000558911 LARP1Q6PKG0 1096 aaKnown RBP5.64□□□□□ -1.51
LRRC28-212ENST00000558911 CMTR1Q8N1G2 835 aaKnown RBP5.64□□□□□ -1.51
LRRC28-212ENST00000558911 IL22RA1Q8N6P7 574 aa5.64□□□□□ -1.51
LRRC28-212ENST00000558911 PLD4Q96BZ4 506 aa5.64□□□□□ -1.51
LRRC28-212ENST00000558911 MRPL18Q9H0U6 180 aaKnown RBP5.64□□□□□ -1.51
LRRC28-212ENST00000558911 F8W735 103 aaPredicted RBP5.63□□□□□ -1.51
LRRC28-212ENST00000558911 MICAL2O94851 1124 aa5.63□□□□□ -1.51
LRRC28-212ENST00000558911 MED26O95402 600 aa5.63□□□□□ -1.51
LRRC28-212ENST00000558911 GHRHP01286 108 aa5.63□□□□□ -1.51
LRRC28-212ENST00000558911 DZIP1LQ8IYY4 767 aaKnown RBP5.63□□□□□ -1.51
LRRC28-212ENST00000558911 VTI1AQ96AJ9 217 aa5.63□□□□□ -1.51
LRRC28-212ENST00000558911 LOC102724428A0A0B4J2F2 783 aa5.62□□□□□ -1.51
LRRC28-212ENST00000558911 KRTAP4-8A0A0G2JLE6 195 aa5.62□□□□□ -1.51
LRRC28-212ENST00000558911 CDC25BP30305 580 aa5.62□□□□□ -1.51
LRRC28-212ENST00000558911 CD97P48960 835 aa5.62□□□□□ -1.51
LRRC28-212ENST00000558911 SIK1P57059 783 aa5.62□□□□□ -1.51
LRRC28-212ENST00000558911 DPYDQ12882 1025 aa5.62□□□□□ -1.51
LRRC28-212ENST00000558911 RGL4Q8IZJ4 473 aa5.62□□□□□ -1.51
LRRC28-212ENST00000558911 C1orf115Q9H7X2 142 aa5.62□□□□□ -1.51
LRRC28-212ENST00000558911 TFIP11Q9UBB9 837 aaKnown RBP5.62□□□□□ -1.51
LRRC28-212ENST00000558911 RAXQ9Y2V3 346 aa5.62□□□□□ -1.51
LRRC28-212ENST00000558911 OAS3Q9Y6K5 1087 aaKnown RBP5.62□□□□□ -1.51
LRRC28-212ENST00000558911 XYLBO75191 536 aa5.61□□□□□ -1.51
LRRC28-212ENST00000558911 IGLV1-40P01703 118 aa5.61□□□□□ -1.51
LRRC28-212ENST00000558911 PSAPP07602 524 aa5.61□□□□□ -1.51
LRRC28-212ENST00000558911 GP2P55259 537 aaKnown RBP5.61□□□□□ -1.51
LRRC28-212ENST00000558911 CRTC2Q53ET0 693 aaPredicted RBP5.61□□□□□ -1.51
LRRC28-212ENST00000558911 TTC9Q92623 222 aa5.61□□□□□ -1.51
LRRC28-212ENST00000558911 RBSNQ9H1K0 784 aa5.61□□□□□ -1.51
LRRC28-212ENST00000558911 TLR7Q9NYK1 1049 aaKnown RBP5.61□□□□□ -1.51
LRRC28-212ENST00000558911 STOML1Q9UBI4 398 aa5.61□□□□□ -1.51
LRRC28-212ENST00000558911 RTCBQ9Y3I0 505 aaKnown RBP5.61□□□□□ -1.51
LRRC28-212ENST00000558911 RNF114Q9Y508 228 aa5.61□□□□□ -1.51
LRRC28-212ENST00000558911 ZBTB7CA1YPR0 619 aa5.6□□□□□ -1.51
LRRC28-212ENST00000558911 YBX3P16989 372 aaKnown RBP eCLIP5.6□□□□□ -1.51
LRRC28-212ENST00000558911 IGFBP4P22692 258 aa5.6□□□□□ -1.51
LRRC28-212ENST00000558911 NRLP54845 237 aa5.6□□□□□ -1.51
LRRC28-212ENST00000558911 TXNDC11Q6PKC3 985 aa5.6□□□□□ -1.51
LRRC28-212ENST00000558911 TMEM130Q8N3G9 435 aa5.6□□□□□ -1.51
LRRC28-212ENST00000558911 QTRT2Q9H974 415 aaKnown RBP5.6□□□□□ -1.51
LRRC28-212ENST00000558911 TRIM33Q9UPN9 1127 aa5.6□□□□□ -1.51
LRRC28-212ENST00000558911 CCDC9Q9Y3X0 531 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms