RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 ABCC12Q96J65 1359 aa9.56□□□□□ -0.88
LRRC28-211ENST00000558890 SRGNP10124 158 aa9.56□□□□□ -0.88
LRRC28-211ENST00000558890 BEND3Q5T5X7 828 aa9.56□□□□□ -0.88
LRRC28-211ENST00000558890 NBPF5PQ86XG9 351 aaPredicted RBP9.56□□□□□ -0.88
LRRC28-211ENST00000558890 NUTM1Q86Y26 1132 aa9.56□□□□□ -0.88
LRRC28-211ENST00000558890 CNBD1Q8NA66 436 aa9.56□□□□□ -0.88
LRRC28-211ENST00000558890 SRCIN1Q9C0H9 1055 aa9.56□□□□□ -0.88
LRRC28-211ENST00000558890 NYXQ9GZU5 481 aa9.56□□□□□ -0.88
LRRC28-211ENST00000558890 MAP3K2Q9Y2U5 619 aa9.56□□□□□ -0.88
LRRC28-211ENST00000558890 PCDHB15Q9Y5E8 787 aa9.56□□□□□ -0.88
LRRC28-211ENST00000558890 CDHR2Q9BYE9 1310 aa9.56□□□□□ -0.88
LRRC28-211ENST00000558890 ANKRD31Q8N7Z5 1873 aa9.55□□□□□ -0.88
LRRC28-211ENST00000558890 ATP5J2-PTCD1G3V325 749 aa9.55□□□□□ -0.88
LRRC28-211ENST00000558890 HOXA10P31260 410 aaPredicted RBP9.55□□□□□ -0.88
LRRC28-211ENST00000558890 PPP1R42Q7Z4L9 355 aa9.55□□□□□ -0.88
LRRC28-211ENST00000558890 KLHL34Q8N239 644 aa9.55□□□□□ -0.88
LRRC28-211ENST00000558890 UTP14AQ9BVJ6 771 aaKnown RBP9.55□□□□□ -0.88
LRRC28-211ENST00000558890 UPF2Q9HAU5 1272 aaKnown RBP9.55□□□□□ -0.88
LRRC28-211ENST00000558890 PDZRN3Q9UPQ7 1066 aa9.55□□□□□ -0.88
LRRC28-211ENST00000558890 DDX60Q8IY21 1712 aaKnown RBP9.54□□□□□ -0.88
LRRC28-211ENST00000558890 FAM177BA6PVY3 158 aa9.54□□□□□ -0.88
LRRC28-211ENST00000558890 NEURL1BA8MQ27 555 aa9.54□□□□□ -0.88
LRRC28-211ENST00000558890 GNAI3P08754 354 aa9.54□□□□□ -0.88
LRRC28-211ENST00000558890 PDE6BP35913 854 aa9.54□□□□□ -0.88
LRRC28-211ENST00000558890 CASP7P55210 303 aa9.54□□□□□ -0.88
LRRC28-211ENST00000558890 HDAC1Q13547 482 aaPredicted RBP9.54□□□□□ -0.88
LRRC28-211ENST00000558890 C2CD5Q86YS7 1000 aa9.54□□□□□ -0.88
LRRC28-211ENST00000558890 CWC25Q9NXE8 425 aaPredicted RBP9.54□□□□□ -0.88
LRRC28-211ENST00000558890 PIM2Q9P1W9 311 aa9.54□□□□□ -0.88
LRRC28-211ENST00000558890 ZBTB12Q9Y330 459 aaPredicted RBP9.54□□□□□ -0.88
LRRC28-211ENST00000558890 DLEC1Q9Y238 1755 aa9.54□□□□□ -0.88
LRRC28-211ENST00000558890 BRCA1P38398 1863 aaKnown RBP9.53□□□□□ -0.88
LRRC28-211ENST00000558890 F6X3S4 739 aa9.53□□□□□ -0.88
LRRC28-211ENST00000558890 H0YIN7 160 aa9.53□□□□□ -0.88
LRRC28-211ENST00000558890 H7C1W4 665 aa9.53□□□□□ -0.88
LRRC28-211ENST00000558890 PCCAP05165 728 aaPredicted RBP9.53□□□□□ -0.88
LRRC28-211ENST00000558890 PRELPP51888 382 aa9.53□□□□□ -0.88
LRRC28-211ENST00000558890 GCKRQ14397 625 aa9.53□□□□□ -0.88
LRRC28-211ENST00000558890 NBR1Q14596 966 aa9.53□□□□□ -0.88
LRRC28-211ENST00000558890 STYK1Q6J9G0 422 aa9.53□□□□□ -0.88
LRRC28-211ENST00000558890 TMEM57Q8N5G2 664 aa9.53□□□□□ -0.88
LRRC28-211ENST00000558890 ZBTB38Q8NAP3 1195 aaPredicted RBP9.53□□□□□ -0.88
LRRC28-211ENST00000558890 FAM89AQ96GI7 184 aa9.53□□□□□ -0.88
LRRC28-211ENST00000558890 MYD88Q99836 296 aa9.53□□□□□ -0.88
LRRC28-211ENST00000558890 PLA2G12BQ9BX93 195 aa9.53□□□□□ -0.88
LRRC28-211ENST00000558890 RTL9Q8NET4 1388 aa9.52□□□□□ -0.88
LRRC28-211ENST00000558890 GRM8O00222 908 aa9.52□□□□□ -0.89
LRRC28-211ENST00000558890 GRIN3BO60391 1043 aa9.52□□□□□ -0.89
LRRC28-211ENST00000558890 HCLS1P14317 486 aaPredicted RBP9.52□□□□□ -0.89
LRRC28-211ENST00000558890 ST5P78524 1137 aa9.52□□□□□ -0.89
LRRC28-211ENST00000558890 SF3B3Q15393 1217 aaKnown RBP9.52□□□□□ -0.89
LRRC28-211ENST00000558890 GPR162Q16538 588 aa9.52□□□□□ -0.89
LRRC28-211ENST00000558890 DALRD3Q5D0E6 543 aaKnown RBP9.52□□□□□ -0.89
LRRC28-211ENST00000558890 SLC51AQ86UW1 340 aa9.52□□□□□ -0.89
LRRC28-211ENST00000558890 TTLL6Q8N841 843 aa9.52□□□□□ -0.89
LRRC28-211ENST00000558890 MASTLQ96GX5 879 aa9.52□□□□□ -0.89
LRRC28-211ENST00000558890 TRMT112Q9UI30 125 aaKnown RBP9.52□□□□□ -0.89
LRRC28-211ENST00000558890 WWC3Q9ULE0 1092 aa9.52□□□□□ -0.89
LRRC28-211ENST00000558890 SH3TC1Q8TE82 1336 aa9.52□□□□□ -0.89
LRRC28-211ENST00000558890 SNED1Q8TER0 1413 aa9.51□□□□□ -0.89
LRRC28-211ENST00000558890 ZBTB7BO15156 539 aaPredicted RBP9.51□□□□□ -0.89
LRRC28-211ENST00000558890 NPR1P16066 1061 aa9.51□□□□□ -0.89
LRRC28-211ENST00000558890 MTX1Q13505 466 aa9.51□□□□□ -0.89
LRRC28-211ENST00000558890 CWF19L2Q2TBE0 894 aaKnown RBP9.51□□□□□ -0.89
LRRC28-211ENST00000558890 JARID2Q92833 1246 aaPredicted RBP9.51□□□□□ -0.89
LRRC28-211ENST00000558890 CRAMP1Q96RY5 1269 aa9.51□□□□□ -0.89
LRRC28-211ENST00000558890 USP44Q9H0E7 712 aa9.51□□□□□ -0.89
LRRC28-211ENST00000558890 BCS1LQ9Y276 419 aa9.51□□□□□ -0.89
LRRC28-211ENST00000558890 SLX4Q8IY92 1834 aa9.5□□□□□ -0.89
LRRC28-211ENST00000558890 BECN1Q14457 450 aa9.5□□□□□ -0.89
LRRC28-211ENST00000558890 RABL6Q3YEC7 729 aaPredicted RBP9.5□□□□□ -0.89
LRRC28-211ENST00000558890 SLC4A10Q6U841 1118 aa9.5□□□□□ -0.89
LRRC28-211ENST00000558890 OLFM4Q6UX06 510 aa9.5□□□□□ -0.89
LRRC28-211ENST00000558890 CNKSR1Q969H4 720 aa9.5□□□□□ -0.89
LRRC28-211ENST00000558890 KAZALD1Q96I82 304 aa9.5□□□□□ -0.89
LRRC28-211ENST00000558890 ZBTB40Q9NUA8 1239 aa9.5□□□□□ -0.89
LRRC28-211ENST00000558890 TNRC6CQ9HCJ0 1690 aaKnown RBP9.49□□□□□ -0.89
LRRC28-211ENST00000558890 COL11A2P13942 1736 aaPredicted RBP9.49□□□□□ -0.89
LRRC28-211ENST00000558890 NFKBIEO00221 500 aa9.49□□□□□ -0.89
LRRC28-211ENST00000558890 IRS4O14654 1257 aaPredicted RBP9.49□□□□□ -0.89
LRRC28-211ENST00000558890 CSF1RP07333 972 aa9.49□□□□□ -0.89
LRRC28-211ENST00000558890 UBTFL1P0CB47 393 aaPredicted RBP9.49□□□□□ -0.89
LRRC28-211ENST00000558890 PRPF40BQ6NWY9 871 aaKnown RBP9.49□□□□□ -0.89
LRRC28-211ENST00000558890 RPAP2Q8IXW5 612 aaPredicted RBP9.49□□□□□ -0.89
LRRC28-211ENST00000558890 SMC5Q8IY18 1101 aa9.49□□□□□ -0.89
LRRC28-211ENST00000558890 ZNF622Q969S3 477 aaKnown RBP eCLIP9.49□□□□□ -0.89
LRRC28-211ENST00000558890 NLRP3Q96P20 1036 aa9.49□□□□□ -0.89
LRRC28-211ENST00000558890 C9orf78Q9NZ63 289 aaPredicted RBP9.49□□□□□ -0.89
LRRC28-211ENST00000558890 PDE8AO60658 829 aa9.48□□□□□ -0.89
LRRC28-211ENST00000558890 GNAI2P04899 355 aa9.48□□□□□ -0.89
LRRC28-211ENST00000558890 GTF2E1P29083 439 aaPredicted RBP9.48□□□□□ -0.89
LRRC28-211ENST00000558890 MKRN4PQ13434 485 aaPredicted RBP9.48□□□□□ -0.89
LRRC28-211ENST00000558890 TTLL11Q8NHH1 800 aa9.48□□□□□ -0.89
LRRC28-211ENST00000558890 FBXO3Q9UK99 471 aa9.48□□□□□ -0.89
LRRC28-211ENST00000558890 COL4A1P02462 1669 aa9.48□□□□□ -0.89
LRRC28-211ENST00000558890 LRRC37AA6NMS7 1700 aa9.48□□□□□ -0.89
LRRC28-211ENST00000558890 C21orf2O43822 256 aa9.47□□□□□ -0.89
LRRC28-211ENST00000558890 ALDH1B1P30837 517 aa9.47□□□□□ -0.89
LRRC28-211ENST00000558890 FOXO4P98177 505 aa9.47□□□□□ -0.89
LRRC28-211ENST00000558890 EPHA10Q5JZY3 1008 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms