RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 HDGFL1Q5TGJ6 251 aa15□□□□□ -0.01
CASC4-205ENST00000558735 ANKRD13DQ6ZTN6 518 aa15□□□□□ -0.01
CASC4-205ENST00000558735 BEGAINQ9BUH8 593 aa15□□□□□ -0.01
CASC4-205ENST00000558735 VPS33BQ9H267 617 aa15□□□□□ -0.01
CASC4-205ENST00000558735 PCDH10Q9P2E7 1040 aa15□□□□□ -0.01
CASC4-205ENST00000558735 PPEF1O14829 653 aaPredicted RBP14.99□□□□□ -0.01
CASC4-205ENST00000558735 CA12O43570 354 aa14.99□□□□□ -0.01
CASC4-205ENST00000558735 PLBD2Q8NHP8 589 aa14.99□□□□□ -0.01
CASC4-205ENST00000558735 ZNF428Q96B54 188 aa14.99□□□□□ -0.01
CASC4-205ENST00000558735 HHIPL1Q96JK4 782 aa14.99□□□□□ -0.01
CASC4-205ENST00000558735 DBF4Q9UBU7 674 aaPredicted RBP14.99□□□□□ -0.01
CASC4-205ENST00000558735 TRMT112Q9UI30 125 aaKnown RBP14.99□□□□□ -0.01
CASC4-205ENST00000558735 TNRC18O15417 2968 aaPredicted RBP14.98□□□□□ -0.01
CASC4-205ENST00000558735 CYP4F22Q6NT55 531 aa14.98□□□□□ -0.01
CASC4-205ENST00000558735 ATP6V0A2Q9Y487 856 aa14.98□□□□□ -0.01
CASC4-205ENST00000558735 GJA3Q9Y6H8 435 aa14.98□□□□□ -0.01
CASC4-205ENST00000558735 ELL2O00472 640 aaPredicted RBP14.97□□□□□ -0.01
CASC4-205ENST00000558735 BBOX1O75936 387 aa14.97□□□□□ -0.01
CASC4-205ENST00000558735 FMR1Q06787 632 aaKnown RBP eCLIP14.97□□□□□ -0.01
CASC4-205ENST00000558735 LARGE2Q8N3Y3 721 aa14.97□□□□□ -0.01
CASC4-205ENST00000558735 ISCA1Q9BUE6 129 aa14.97□□□□□ -0.01
CASC4-205ENST00000558735 IFT57Q9NWB7 429 aa14.97□□□□□ -0.01
CASC4-205ENST00000558735 HYPKQ9NX55 129 aa14.97□□□□□ -0.01
CASC4-205ENST00000558735 PGAP2Q9UHJ9 254 aa14.97□□□□□ -0.01
CASC4-205ENST00000558735 ABCC4O15439 1325 aa14.96□□□□□ -0.01
CASC4-205ENST00000558735 SH3TC1Q8TE82 1336 aa14.96□□□□□ -0.01
CASC4-205ENST00000558735 CCDC85CA6NKD9 419 aa14.96□□□□□ -0.01
CASC4-205ENST00000558735 ATP5J2-PTCD1G3V325 749 aa14.96□□□□□ -0.01
CASC4-205ENST00000558735 TRAF5O00463 557 aa14.96□□□□□ -0.01
CASC4-205ENST00000558735 GNAI1P63096 354 aa14.96□□□□□ -0.01
CASC4-205ENST00000558735 SAPCD2Q86UD0 394 aa14.96□□□□□ -0.01
CASC4-205ENST00000558735 SP8Q8IXZ3 490 aa14.96□□□□□ -0.01
CASC4-205ENST00000558735 ADARB2Q9NS39 739 aaKnown RBP14.96□□□□□ -0.01
CASC4-205ENST00000558735 GPRC5DQ9NZD1 345 aa14.96□□□□□ -0.01
CASC4-205ENST00000558735 TRPM7Q96QT4 1865 aa14.95□□□□□ -0.02
CASC4-205ENST00000558735 TRIM28Q13263 835 aaKnown RBP14.95□□□□□ -0.02
CASC4-205ENST00000558735 C8orf58Q8NAV2 365 aa14.95□□□□□ -0.02
CASC4-205ENST00000558735 FAM89AQ96GI7 184 aa14.95□□□□□ -0.02
CASC4-205ENST00000558735 RTFDC1Q9BY42 306 aaPredicted RBP14.95□□□□□ -0.02
CASC4-205ENST00000558735 PHAXQ9H814 394 aaKnown RBP14.95□□□□□ -0.02
CASC4-205ENST00000558735 BRPF1P55201 1214 aaPredicted RBP14.94□□□□□ -0.02
CASC4-205ENST00000558735 DDX46Q7L014 1031 aaKnown RBP14.94□□□□□ -0.02
CASC4-205ENST00000558735 NIM1KQ8IY84 436 aa14.94□□□□□ -0.02
CASC4-205ENST00000558735 ZC3H15Q8WU90 426 aaKnown RBP14.94□□□□□ -0.02
CASC4-205ENST00000558735 TMX4Q9H1E5 349 aaPredicted RBP14.94□□□□□ -0.02
CASC4-205ENST00000558735 CDHR2Q9BYE9 1310 aa14.93□□□□□ -0.02
CASC4-205ENST00000558735 AOC2O75106 756 aa14.93□□□□□ -0.02
CASC4-205ENST00000558735 CALD1Q05682 793 aaKnown RBP14.93□□□□□ -0.02
CASC4-205ENST00000558735 GRAPQ13588 217 aa14.93□□□□□ -0.02
CASC4-205ENST00000558735 AOC3Q16853 763 aa14.93□□□□□ -0.02
CASC4-205ENST00000558735 MPNDQ8N594 471 aa14.93□□□□□ -0.02
CASC4-205ENST00000558735 GRAPLQ8TC17 118 aaPredicted RBP14.93□□□□□ -0.02
CASC4-205ENST00000558735 PPIP5K2O43314 1243 aa14.92□□□□□ -0.02
CASC4-205ENST00000558735 CXCL9Q07325 125 aa14.92□□□□□ -0.02
CASC4-205ENST00000558735 SF3B3Q15393 1217 aaKnown RBP14.92□□□□□ -0.02
CASC4-205ENST00000558735 RTL5Q5HYW3 569 aaPredicted RBP14.92□□□□□ -0.02
CASC4-205ENST00000558735 PAXIP1Q6ZW49 1069 aaPredicted RBP14.92□□□□□ -0.02
CASC4-205ENST00000558735 RIC3Q7Z5B4 369 aa14.92□□□□□ -0.02
CASC4-205ENST00000558735 MCOLN1Q9GZU1 580 aa14.92□□□□□ -0.02
CASC4-205ENST00000558735 ZNRF3Q9ULT6 936 aa14.92□□□□□ -0.02
CASC4-205ENST00000558735 CELF2O95319 508 aaKnown RBP14.91□□□□□ -0.02
CASC4-205ENST00000558735 DPP8Q6V1X1 898 aaPredicted RBP14.91□□□□□ -0.02
CASC4-205ENST00000558735 TSPYL6Q8N831 410 aa14.91□□□□□ -0.02
CASC4-205ENST00000558735 SUPT20HQ8NEM7 779 aa14.91□□□□□ -0.02
CASC4-205ENST00000558735 CELF1Q92879 486 aaKnown RBP14.9□□□□□ -0.02
CASC4-205ENST00000558735 IRS4O14654 1257 aaPredicted RBP14.89□□□□□ -0.03
CASC4-205ENST00000558735 ZEB1P37275 1124 aaPredicted RBP14.89□□□□□ -0.03
CASC4-205ENST00000558735 GMPSP49915 693 aaPredicted RBP14.89□□□□□ -0.03
CASC4-205ENST00000558735 KIAA2012Q0VF49 1180 aa14.89□□□□□ -0.03
CASC4-205ENST00000558735 GRM1Q13255 1194 aa14.89□□□□□ -0.03
CASC4-205ENST00000558735 TSKSQ9UJT2 592 aa14.89□□□□□ -0.03
CASC4-205ENST00000558735 HIRAP54198 1017 aaPredicted RBP14.88□□□□□ -0.03
CASC4-205ENST00000558735 GOLGA2Q08379 1002 aa14.88□□□□□ -0.03
CASC4-205ENST00000558735 NOGQ13253 232 aa14.88□□□□□ -0.03
CASC4-205ENST00000558735 CCDC27Q2M243 656 aa14.88□□□□□ -0.03
CASC4-205ENST00000558735 CCDC30Q5VVM6 783 aa14.88□□□□□ -0.03
CASC4-205ENST00000558735 CDC37L1Q7L3B6 337 aa14.88□□□□□ -0.03
CASC4-205ENST00000558735 TMC4Q7Z404 712 aa14.88□□□□□ -0.03
CASC4-205ENST00000558735 WWC1Q8IX03 1113 aa14.88□□□□□ -0.03
CASC4-205ENST00000558735 ZBTB38Q8NAP3 1195 aaPredicted RBP14.88□□□□□ -0.03
CASC4-205ENST00000558735 TSR2Q969E8 191 aaKnown RBP14.88□□□□□ -0.03
CASC4-205ENST00000558735 MYD88Q99836 296 aa14.88□□□□□ -0.03
CASC4-205ENST00000558735 GLIS2Q9BZE0 524 aaPredicted RBP14.88□□□□□ -0.03
CASC4-205ENST00000558735 ANKRD36CQ5JPF3 1778 aa14.88□□□□□ -0.03
CASC4-205ENST00000558735 RPS8P62241 208 aaKnown RBP14.87□□□□□ -0.03
CASC4-205ENST00000558735 TNIP1Q15025 636 aa14.87□□□□□ -0.03
CASC4-205ENST00000558735 CCDC191Q8NCU4 936 aa14.87□□□□□ -0.03
CASC4-205ENST00000558735 JARID2Q92833 1246 aaPredicted RBP14.87□□□□□ -0.03
CASC4-205ENST00000558735 ZNF316A6NFI3 1004 aaPredicted RBP14.86□□□□□ -0.03
CASC4-205ENST00000558735 YDJCA8MPS7 323 aa14.86□□□□□ -0.03
CASC4-205ENST00000558735 RAD17O75943 681 aa14.86□□□□□ -0.03
CASC4-205ENST00000558735 CIAPIN1Q6FI81 312 aa14.86□□□□□ -0.03
CASC4-205ENST00000558735 METTL22Q9BUU2 404 aaPredicted RBP14.86□□□□□ -0.03
CASC4-205ENST00000558735 CHMP4AQ9BY43 222 aa14.86□□□□□ -0.03
CASC4-205ENST00000558735 POLLQ9UGP5 575 aa14.86□□□□□ -0.03
CASC4-205ENST00000558735 NSFL1CQ9UNZ2 370 aaKnown RBP14.86□□□□□ -0.03
CASC4-205ENST00000558735 TAF1P21675 1872 aa14.86□□□□□ -0.03
CASC4-205ENST00000558735 LAMB2P55268 1798 aa14.85□□□□□ -0.03
CASC4-205ENST00000558735 PCCAP05165 728 aaPredicted RBP14.85□□□□□ -0.03
CASC4-205ENST00000558735 GPSM2P81274 684 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms