RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 ZBTB38Q8NAP3 1195 aaPredicted RBP13.02□□□□□ -0.32
CSPG4P5-201ENST00000558731 CERKQ8TCT0 537 aa13.02□□□□□ -0.32
CSPG4P5-201ENST00000558731 A0A0D9SFI3 127 aa13.02□□□□□ -0.33
CSPG4P5-201ENST00000558731 CCDC158Q5M9N0 1113 aa13.02□□□□□ -0.33
CSPG4P5-201ENST00000558731 IQSEC3Q9UPP2 1182 aaPredicted RBP13.02□□□□□ -0.33
CSPG4P5-201ENST00000558731 JCADQ9P266 1359 aa13.02□□□□□ -0.33
CSPG4P5-201ENST00000558731 ZKSCAN1P17029 563 aaPredicted RBP13.02□□□□□ -0.33
CSPG4P5-201ENST00000558731 ADORA1P30542 326 aa13.02□□□□□ -0.33
CSPG4P5-201ENST00000558731 RFX5P48382 616 aaPredicted RBP13.02□□□□□ -0.33
CSPG4P5-201ENST00000558731 ISCA1Q9BUE6 129 aa13.02□□□□□ -0.33
CSPG4P5-201ENST00000558731 AFF2P51816 1311 aa13.02□□□□□ -0.33
CSPG4P5-201ENST00000558731 PHLPP1O60346 1717 aa13.02□□□□□ -0.33
CSPG4P5-201ENST00000558731 TAF5LO75529 589 aa13.01□□□□□ -0.33
CSPG4P5-201ENST00000558731 IL6STP40189 918 aaPredicted RBP13.01□□□□□ -0.33
CSPG4P5-201ENST00000558731 CCNL1Q9UK58 526 aaPredicted RBP13.01□□□□□ -0.33
CSPG4P5-201ENST00000558731 NHSL1Q5SYE7 1610 aa13.01□□□□□ -0.33
CSPG4P5-201ENST00000558731 PI16Q6UXB8 463 aa13.01□□□□□ -0.33
CSPG4P5-201ENST00000558731 NAP1L5Q96NT1 182 aaPredicted RBP13.01□□□□□ -0.33
CSPG4P5-201ENST00000558731 PARP4Q9UKK3 1724 aaKnown RBP13.01□□□□□ -0.33
CSPG4P5-201ENST00000558731 PCCAP05165 728 aaPredicted RBP13.01□□□□□ -0.33
CSPG4P5-201ENST00000558731 CASP7P55210 303 aa13.01□□□□□ -0.33
CSPG4P5-201ENST00000558731 SMARCC1Q92922 1105 aaPredicted RBP13.01□□□□□ -0.33
CSPG4P5-201ENST00000558731 RABL6Q3YEC7 729 aaPredicted RBP13□□□□□ -0.33
CSPG4P5-201ENST00000558731 SUSD4Q5VX71 490 aa13□□□□□ -0.33
CSPG4P5-201ENST00000558731 SEC31BQ9NQW1 1179 aa13□□□□□ -0.33
CSPG4P5-201ENST00000558731 AOX1Q06278 1338 aa13□□□□□ -0.33
CSPG4P5-201ENST00000558731 SSFA2P28290 1259 aa13□□□□□ -0.33
CSPG4P5-201ENST00000558731 SRP68Q9UHB9 627 aaKnown RBP13□□□□□ -0.33
CSPG4P5-201ENST00000558731 TNS2Q63HR2 1409 aa13□□□□□ -0.33
CSPG4P5-201ENST00000558731 ATP2B3Q16720 1220 aa13□□□□□ -0.33
CSPG4P5-201ENST00000558731 RASEFQ8IZ41 740 aa13□□□□□ -0.33
CSPG4P5-201ENST00000558731 UTP14AQ9BVJ6 771 aaKnown RBP13□□□□□ -0.33
CSPG4P5-201ENST00000558731 SH3TC1Q8TE82 1336 aa12.99□□□□□ -0.33
CSPG4P5-201ENST00000558731 IDH1O75874 414 aaKnown RBP12.99□□□□□ -0.33
CSPG4P5-201ENST00000558731 CTSWP56202 376 aa12.99□□□□□ -0.33
CSPG4P5-201ENST00000558731 SNX21Q969T3 373 aa12.99□□□□□ -0.33
CSPG4P5-201ENST00000558731 ANTXR1Q9H6X2 564 aa12.99□□□□□ -0.33
CSPG4P5-201ENST00000558731 RBM8AQ9Y5S9 174 aaKnown RBP12.99□□□□□ -0.33
CSPG4P5-201ENST00000558731 ZPR1O75312 459 aa12.99□□□□□ -0.33
CSPG4P5-201ENST00000558731 MRC1P22897 1456 aa12.99□□□□□ -0.33
CSPG4P5-201ENST00000558731 LTBP4Q8N2S1 1624 aa12.99□□□□□ -0.33
CSPG4P5-201ENST00000558731 ABCC6O95255 1503 aa12.99□□□□□ -0.33
CSPG4P5-201ENST00000558731 VPS72Q15906 364 aa12.99□□□□□ -0.33
CSPG4P5-201ENST00000558731 ATG9AQ7Z3C6 839 aa12.99□□□□□ -0.33
CSPG4P5-201ENST00000558731 UBN2Q6ZU65 1347 aa12.98□□□□□ -0.33
CSPG4P5-201ENST00000558731 CRYBG1Q9Y4K1 1723 aa12.98□□□□□ -0.33
CSPG4P5-201ENST00000558731 STK3Q13188 491 aa12.98□□□□□ -0.33
CSPG4P5-201ENST00000558731 INTS5Q6P9B9 1019 aaKnown RBP12.98□□□□□ -0.33
CSPG4P5-201ENST00000558731 ZNF589Q86UQ0 364 aaPredicted RBP12.98□□□□□ -0.33
CSPG4P5-201ENST00000558731 STK11IPQ8N1F8 1099 aa12.98□□□□□ -0.33
CSPG4P5-201ENST00000558731 TTLL11Q8NHH1 800 aa12.98□□□□□ -0.33
CSPG4P5-201ENST00000558731 XAGE2Q96GT9 111 aa12.98□□□□□ -0.33
CSPG4P5-201ENST00000558731 PAG1Q9NWQ8 432 aa12.98□□□□□ -0.33
CSPG4P5-201ENST00000558731 ZNF652Q9Y2D9 606 aa12.98□□□□□ -0.33
CSPG4P5-201ENST00000558731 APPP05067 770 aa12.98□□□□□ -0.33
CSPG4P5-201ENST00000558731 TMX3Q96JJ7 454 aa12.98□□□□□ -0.33
CSPG4P5-201ENST00000558731 QTRT2Q9H974 415 aaKnown RBP12.98□□□□□ -0.33
CSPG4P5-201ENST00000558731 KCPQ6ZWJ8 1503 aa12.98□□□□□ -0.33
CSPG4P5-201ENST00000558731 HSP90B1P14625 803 aaKnown RBP12.98□□□□□ -0.33
CSPG4P5-201ENST00000558731 SEPT12Q8IYM1 358 aa12.98□□□□□ -0.33
CSPG4P5-201ENST00000558731 HIP1O00291 1037 aa12.97□□□□□ -0.33
CSPG4P5-201ENST00000558731 PDE8AO60658 829 aa12.97□□□□□ -0.33
CSPG4P5-201ENST00000558731 PPFIA3O75145 1194 aa12.97□□□□□ -0.33
CSPG4P5-201ENST00000558731 USPL1Q5W0Q7 1092 aa12.97□□□□□ -0.33
CSPG4P5-201ENST00000558731 LINC00116Q8NCU8 138 aa12.97□□□□□ -0.33
CSPG4P5-201ENST00000558731 TNPO1Q92973 898 aaKnown RBP12.97□□□□□ -0.33
CSPG4P5-201ENST00000558731 CHAMP1Q96JM3 812 aa12.97□□□□□ -0.33
CSPG4P5-201ENST00000558731 PKD1L3Q7Z443 1732 aa12.97□□□□□ -0.33
CSPG4P5-201ENST00000558731 EIF5P55010 431 aaKnown RBP12.97□□□□□ -0.33
CSPG4P5-201ENST00000558731 PKP1Q13835 747 aa12.97□□□□□ -0.33
CSPG4P5-201ENST00000558731 BARGINQ6ZT62 677 aa12.97□□□□□ -0.33
CSPG4P5-201ENST00000558731 LRRC2Q9BYS8 371 aa12.97□□□□□ -0.33
CSPG4P5-201ENST00000558731 SNX14Q9Y5W7 946 aa12.97□□□□□ -0.33
CSPG4P5-201ENST00000558731 RAD50Q92878 1312 aa12.97□□□□□ -0.33
CSPG4P5-201ENST00000558731 GJD4Q96KN9 370 aaPredicted RBP12.97□□□□□ -0.33
CSPG4P5-201ENST00000558731 AKAP2Q9Y2D5 859 aa12.97□□□□□ -0.33
CSPG4P5-201ENST00000558731 DISP2A7MBM2 1401 aa12.96□□□□□ -0.33
CSPG4P5-201ENST00000558731 IGHMBP2P38935 993 aaKnown RBP12.96□□□□□ -0.33
CSPG4P5-201ENST00000558731 GBP4Q96PP9 640 aa12.96□□□□□ -0.33
CSPG4P5-201ENST00000558731 LSG1Q9H089 658 aaKnown RBP12.96□□□□□ -0.33
CSPG4P5-201ENST00000558731 COL14A1Q05707 1796 aaKnown RBP12.96□□□□□ -0.33
CSPG4P5-201ENST00000558731 CCDC171Q6TFL3 1326 aa12.96□□□□□ -0.33
CSPG4P5-201ENST00000558731 ATP5JP18859 108 aa12.96□□□□□ -0.33
CSPG4P5-201ENST00000558731 ADCK5Q3MIX3 580 aa12.96□□□□□ -0.33
CSPG4P5-201ENST00000558731 AK7Q96M32 723 aa12.96□□□□□ -0.33
CSPG4P5-201ENST00000558731 ABCA3Q99758 1704 aa12.96□□□□□ -0.34
CSPG4P5-201ENST00000558731 GOLGA6L22H0YM25 854 aa12.96□□□□□ -0.34
CSPG4P5-201ENST00000558731 FOSBP53539 338 aa12.96□□□□□ -0.34
CSPG4P5-201ENST00000558731 HAND2P61296 217 aa12.96□□□□□ -0.34
CSPG4P5-201ENST00000558731 RNF20Q5VTR2 975 aa12.96□□□□□ -0.34
CSPG4P5-201ENST00000558731 MCTP1Q6DN14 999 aa12.96□□□□□ -0.34
CSPG4P5-201ENST00000558731 NBPF5PQ86XG9 351 aaPredicted RBP12.96□□□□□ -0.34
CSPG4P5-201ENST00000558731 MCM4P33991 863 aa12.95□□□□□ -0.34
CSPG4P5-201ENST00000558731 RFC4P35249 363 aa12.95□□□□□ -0.34
CSPG4P5-201ENST00000558731 VPS37DQ86XT2 251 aa12.95□□□□□ -0.34
CSPG4P5-201ENST00000558731 PDRG1Q9NUG6 133 aa12.95□□□□□ -0.34
CSPG4P5-201ENST00000558731 RTCBQ9Y3I0 505 aaKnown RBP12.95□□□□□ -0.34
CSPG4P5-201ENST00000558731 CYP46A1Q9Y6A2 500 aa12.95□□□□□ -0.34
CSPG4P5-201ENST00000558731 SIPA1L3O60292 1781 aaPredicted RBP12.95□□□□□ -0.34
CSPG4P5-201ENST00000558731 TRIM37O94972 964 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms