RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 NFKBIEO00221 500 aa15.64■□□□□ 0.09
SMAD3-205ENST00000558428 CASP7P55210 303 aa15.64■□□□□ 0.09
SMAD3-205ENST00000558428 CTSWP56202 376 aa15.64■□□□□ 0.09
SMAD3-205ENST00000558428 CCDC152Q4G0S7 254 aa15.64■□□□□ 0.09
SMAD3-205ENST00000558428 OLFM4Q6UX06 510 aa15.64■□□□□ 0.09
SMAD3-205ENST00000558428 CCDC85AQ96PX6 553 aaPredicted RBP15.64■□□□□ 0.09
SMAD3-205ENST00000558428 API5Q9BZZ5 524 aaKnown RBP15.64■□□□□ 0.09
SMAD3-205ENST00000558428 C9orf78Q9NZ63 289 aaPredicted RBP15.64■□□□□ 0.09
SMAD3-205ENST00000558428 GRM8O00222 908 aa15.63■□□□□ 0.09
SMAD3-205ENST00000558428 BBOX1O75936 387 aa15.63■□□□□ 0.09
SMAD3-205ENST00000558428 YTHDC1Q96MU7 727 aaKnown RBP15.63■□□□□ 0.09
SMAD3-205ENST00000558428 TMX4Q9H1E5 349 aaPredicted RBP15.63■□□□□ 0.09
SMAD3-205ENST00000558428 TAOK3Q9H2K8 898 aa15.63■□□□□ 0.09
SMAD3-205ENST00000558428 C9orf131Q5VYM1 1079 aa15.62■□□□□ 0.09
SMAD3-205ENST00000558428 CC2D2BQ6DHV5 1058 aa15.62■□□□□ 0.09
SMAD3-205ENST00000558428 RTKN2Q8IZC4 609 aa15.62■□□□□ 0.09
SMAD3-205ENST00000558428 FRAT1Q92837 279 aaPredicted RBP15.62■□□□□ 0.09
SMAD3-205ENST00000558428 CELF1Q92879 486 aaKnown RBP15.62■□□□□ 0.09
SMAD3-205ENST00000558428 PLA2G12BQ9BX93 195 aa15.62■□□□□ 0.09
SMAD3-205ENST00000558428 SEC31BQ9NQW1 1179 aa15.62■□□□□ 0.09
SMAD3-205ENST00000558428 RNF181Q9P0P0 153 aa15.62■□□□□ 0.09
SMAD3-205ENST00000558428 IPO8O15397 1037 aaKnown RBP15.61■□□□□ 0.09
SMAD3-205ENST00000558428 LMNB1P20700 586 aa15.61■□□□□ 0.09
SMAD3-205ENST00000558428 SLC51AQ86UW1 340 aa15.61■□□□□ 0.09
SMAD3-205ENST00000558428 TTLL11Q8NHH1 800 aa15.61■□□□□ 0.09
SMAD3-205ENST00000558428 ARHGAP45Q92619 1136 aa15.61■□□□□ 0.09
SMAD3-205ENST00000558428 ATP6V0A2Q9Y487 856 aa15.61■□□□□ 0.09
SMAD3-205ENST00000558428 LTBP3Q9NS15 1303 aa15.61■□□□□ 0.09
SMAD3-205ENST00000558428 DICER1Q9UPY3 1922 aaKnown RBP15.6■□□□□ 0.09
SMAD3-205ENST00000558428 COL4A1P02462 1669 aa15.6■□□□□ 0.09
SMAD3-205ENST00000558428 CCT4P50991 539 aaKnown RBP15.6■□□□□ 0.09
SMAD3-205ENST00000558428 FKBP4Q02790 459 aaKnown RBP eCLIP15.6■□□□□ 0.09
SMAD3-205ENST00000558428 NBPF7P0C2Y1 421 aaPredicted RBP15.59■□□□□ 0.09
SMAD3-205ENST00000558428 PRELPP51888 382 aa15.59■□□□□ 0.09
SMAD3-205ENST00000558428 RPS8P62241 208 aaKnown RBP15.59■□□□□ 0.09
SMAD3-205ENST00000558428 GRIPAP1Q4V328 841 aa15.59■□□□□ 0.09
SMAD3-205ENST00000558428 ATF7IPQ6VMQ6 1270 aa15.59■□□□□ 0.09
SMAD3-205ENST00000558428 TMC4Q7Z404 712 aa15.59■□□□□ 0.09
SMAD3-205ENST00000558428 SP8Q8IXZ3 490 aa15.59■□□□□ 0.09
SMAD3-205ENST00000558428 GREM2Q9H772 168 aa15.59■□□□□ 0.09
SMAD3-205ENST00000558428 SPEF2Q9C093 1822 aa15.59■□□□□ 0.09
SMAD3-205ENST00000558428 SNED1Q8TER0 1413 aa15.59■□□□□ 0.09
SMAD3-205ENST00000558428 LRRC37AA6NMS7 1700 aa15.58■□□□□ 0.08
SMAD3-205ENST00000558428 TRIM27P14373 513 aa15.58■□□□□ 0.08
SMAD3-205ENST00000558428 ZKSCAN2Q63HK3 967 aa15.58■□□□□ 0.08
SMAD3-205ENST00000558428 ANKRD18AQ8IVF6 992 aa15.58■□□□□ 0.08
SMAD3-205ENST00000558428 CDC5LQ99459 802 aaKnown RBP15.58■□□□□ 0.08
SMAD3-205ENST00000558428 PSMD1Q99460 953 aa15.58■□□□□ 0.08
SMAD3-205ENST00000558428 UTYO14607 1347 aa15.58■□□□□ 0.08
SMAD3-205ENST00000558428 TIAM2Q8IVF5 1701 aa15.57■□□□□ 0.08
SMAD3-205ENST00000558428 CSF1RP07333 972 aa15.57■□□□□ 0.08
SMAD3-205ENST00000558428 FOXO4P98177 505 aa15.57■□□□□ 0.08
SMAD3-205ENST00000558428 FAM161AQ3B820 660 aa15.57■□□□□ 0.08
SMAD3-205ENST00000558428 EPHA10Q5JZY3 1008 aa15.57■□□□□ 0.08
SMAD3-205ENST00000558428 MPNDQ8N594 471 aa15.57■□□□□ 0.08
SMAD3-205ENST00000558428 SUCLG2Q96I99 432 aa15.57■□□□□ 0.08
SMAD3-205ENST00000558428 USP44Q9H0E7 712 aa15.57■□□□□ 0.08
SMAD3-205ENST00000558428 ZNF277Q9NRM2 450 aaPredicted RBP15.57■□□□□ 0.08
SMAD3-205ENST00000558428 TNNQ9UQP3 1299 aa15.57■□□□□ 0.08
SMAD3-205ENST00000558428 CHMP3Q9Y3E7 222 aa15.57■□□□□ 0.08
SMAD3-205ENST00000558428 RTL9Q8NET4 1388 aa15.57■□□□□ 0.08
SMAD3-205ENST00000558428 ITGA6P23229 1130 aa15.56■□□□□ 0.08
SMAD3-205ENST00000558428 LMBR1LQ6UX01 489 aa15.56■□□□□ 0.08
SMAD3-205ENST00000558428 DPP8Q6V1X1 898 aaPredicted RBP15.56■□□□□ 0.08
SMAD3-205ENST00000558428 ZNF784Q8NCA9 323 aaPredicted RBP15.56■□□□□ 0.08
SMAD3-205ENST00000558428 CLUAP1Q96AJ1 413 aa15.56■□□□□ 0.08
SMAD3-205ENST00000558428 IGHMBP2P38935 993 aaKnown RBP15.55■□□□□ 0.08
SMAD3-205ENST00000558428 IARSP41252 1262 aaKnown RBP15.55■□□□□ 0.08
SMAD3-205ENST00000558428 INTS3Q68E01 1043 aaKnown RBP15.55■□□□□ 0.08
SMAD3-205ENST00000558428 ZC3H4Q9UPT8 1303 aaKnown RBP15.54■□□□□ 0.08
SMAD3-205ENST00000558428 ANKRD18BA2A2Z9 1011 aa15.54■□□□□ 0.08
SMAD3-205ENST00000558428 IFIT5Q13325 482 aaKnown RBP15.54■□□□□ 0.08
SMAD3-205ENST00000558428 SUPT20HQ8NEM7 779 aa15.54■□□□□ 0.08
SMAD3-205ENST00000558428 ZNF526Q8TF50 670 aaPredicted RBP15.54■□□□□ 0.08
SMAD3-205ENST00000558428 KAZALD1Q96I82 304 aa15.54■□□□□ 0.08
SMAD3-205ENST00000558428 BICC1Q9H694 974 aaKnown RBP15.54■□□□□ 0.08
SMAD3-205ENST00000558428 RCAN3Q9UKA8 241 aa15.54■□□□□ 0.08
SMAD3-205ENST00000558428 NSFL1CQ9UNZ2 370 aaKnown RBP15.54■□□□□ 0.08
SMAD3-205ENST00000558428 UBTFL1P0CB47 393 aaPredicted RBP15.53■□□□□ 0.08
SMAD3-205ENST00000558428 GPSM2P81274 684 aa15.53■□□□□ 0.08
SMAD3-205ENST00000558428 FTSJ3Q8IY81 847 aaKnown RBP15.53■□□□□ 0.08
SMAD3-205ENST00000558428 RTFDC1Q9BY42 306 aaPredicted RBP15.53■□□□□ 0.08
SMAD3-205ENST00000558428 BSDC1Q9NW68 430 aaPredicted RBP15.53■□□□□ 0.08
SMAD3-205ENST00000558428 PPIP5K2O43314 1243 aa15.52■□□□□ 0.08
SMAD3-205ENST00000558428 CCDC57Q2TAC2 916 aa15.52■□□□□ 0.08
SMAD3-205ENST00000558428 DZIP1LQ8IYY4 767 aaKnown RBP15.52■□□□□ 0.08
SMAD3-205ENST00000558428 LARGE2Q8N3Y3 721 aa15.52■□□□□ 0.08
SMAD3-205ENST00000558428 MPHOSPH8Q99549 860 aa15.52■□□□□ 0.08
SMAD3-205ENST00000558428 ANKIB1Q9P2G1 1089 aa15.52■□□□□ 0.08
SMAD3-205ENST00000558428 DUOX1Q9NRD9 1551 aa15.52■□□□□ 0.07
SMAD3-205ENST00000558428 LTBP1Q14766 1721 aa15.51■□□□□ 0.07
SMAD3-205ENST00000558428 C6orf229H3BNL8 230 aa15.51■□□□□ 0.07
SMAD3-205ENST00000558428 AOC3Q16853 763 aa15.51■□□□□ 0.07
SMAD3-205ENST00000558428 RABL6Q3YEC7 729 aaPredicted RBP15.51■□□□□ 0.07
SMAD3-205ENST00000558428 TAF7LQ5H9L4 462 aa15.51■□□□□ 0.07
SMAD3-205ENST00000558428 TMEM57Q8N5G2 664 aa15.51■□□□□ 0.07
SMAD3-205ENST00000558428 ANKRD44Q8N8A2 993 aa15.51■□□□□ 0.07
SMAD3-205ENST00000558428 JDP2Q8WYK2 163 aa15.51■□□□□ 0.07
SMAD3-205ENST00000558428 MEIS3Q99687 375 aa15.51■□□□□ 0.07
SMAD3-205ENST00000558428 VPS33BQ9H267 617 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms