RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 TADA3O75528 432 aa13.12□□□□□ -0.31
PCAT29-201ENST00000558411 OAS2P29728 719 aaKnown RBP13.12□□□□□ -0.31
PCAT29-201ENST00000558411 ETF1P62495 437 aaKnown RBP13.12□□□□□ -0.31
PCAT29-201ENST00000558411 PRPF40BQ6NWY9 871 aaKnown RBP13.12□□□□□ -0.31
PCAT29-201ENST00000558411 SRLQ86TD4 932 aa13.12□□□□□ -0.31
PCAT29-201ENST00000558411 NECAB1Q8N987 351 aa13.12□□□□□ -0.31
PCAT29-201ENST00000558411 LRRN4CLQ8ND94 238 aa13.12□□□□□ -0.31
PCAT29-201ENST00000558411 STK31Q9BXU1 1019 aa13.12□□□□□ -0.31
PCAT29-201ENST00000558411 NAT10Q9H0A0 1025 aaKnown RBP13.12□□□□□ -0.31
PCAT29-201ENST00000558411 TFIP11Q9UBB9 837 aaKnown RBP13.12□□□□□ -0.31
PCAT29-201ENST00000558411 MON2Q7Z3U7 1717 aa13.11□□□□□ -0.31
PCAT29-201ENST00000558411 ADCY9O60503 1353 aa13.11□□□□□ -0.31
PCAT29-201ENST00000558411 ST5P78524 1137 aa13.11□□□□□ -0.31
PCAT29-201ENST00000558411 POLA2Q14181 598 aa13.11□□□□□ -0.31
PCAT29-201ENST00000558411 ICE2Q659A1 982 aa13.11□□□□□ -0.31
PCAT29-201ENST00000558411 CEP57L1Q8IYX8 460 aa13.11□□□□□ -0.31
PCAT29-201ENST00000558411 RHPN1Q8TCX5 695 aa13.11□□□□□ -0.31
PCAT29-201ENST00000558411 IL1RAPL2Q9NP60 686 aa13.11□□□□□ -0.31
PCAT29-201ENST00000558411 RGPD1P0DJD0 1748 aa13.1□□□□□ -0.31
PCAT29-201ENST00000558411 GLRX3O76003 335 aaKnown RBP13.1□□□□□ -0.31
PCAT29-201ENST00000558411 TBC1D8O95759 1140 aa13.1□□□□□ -0.31
PCAT29-201ENST00000558411 MAP4K4O95819 1239 aaPredicted RBP13.1□□□□□ -0.31
PCAT29-201ENST00000558411 SMC1AQ14683 1233 aaKnown RBP13.1□□□□□ -0.31
PCAT29-201ENST00000558411 LRRFIP1Q32MZ4 808 aaKnown RBP13.1□□□□□ -0.31
PCAT29-201ENST00000558411 NOM1Q5C9Z4 860 aaKnown RBP13.1□□□□□ -0.31
PCAT29-201ENST00000558411 PAXIP1Q6ZW49 1069 aaPredicted RBP13.1□□□□□ -0.31
PCAT29-201ENST00000558411 MCM10Q7L590 875 aa13.1□□□□□ -0.31
PCAT29-201ENST00000558411 NBPF11Q86T75 865 aa13.1□□□□□ -0.31
PCAT29-201ENST00000558411 MNS1Q8NEH6 495 aa13.1□□□□□ -0.31
PCAT29-201ENST00000558411 ZSCAN16Q9H4T2 348 aaPredicted RBP13.1□□□□□ -0.31
PCAT29-201ENST00000558411 DNAI1Q9UI46 699 aa13.1□□□□□ -0.31
PCAT29-201ENST00000558411 PTH1RQ03431 593 aa13.1□□□□□ -0.31
PCAT29-201ENST00000558411 RESTQ13127 1097 aa13.1□□□□□ -0.31
PCAT29-201ENST00000558411 LARP1Q6PKG0 1096 aaKnown RBP13.1□□□□□ -0.31
PCAT29-201ENST00000558411 MYO5BQ9ULV0 1848 aa13.1□□□□□ -0.31
PCAT29-201ENST00000558411 ALKQ9UM73 1620 aa13.09□□□□□ -0.31
PCAT29-201ENST00000558411 IVLP07476 585 aa13.09□□□□□ -0.31
PCAT29-201ENST00000558411 SFPQP23246 707 aaKnown RBP eCLIP13.09□□□□□ -0.31
PCAT29-201ENST00000558411 GTF2A1P52655 376 aaPredicted RBP13.09□□□□□ -0.31
PCAT29-201ENST00000558411 FLIIQ13045 1269 aa13.09□□□□□ -0.31
PCAT29-201ENST00000558411 CC2D1AQ6P1N0 951 aaPredicted RBP13.09□□□□□ -0.31
PCAT29-201ENST00000558411 C10orf67Q8IYJ2 551 aa13.09□□□□□ -0.31
PCAT29-201ENST00000558411 COG3Q96JB2 828 aa13.09□□□□□ -0.31
PCAT29-201ENST00000558411 BPIFA3Q9BQP9 254 aa13.09□□□□□ -0.31
PCAT29-201ENST00000558411 STAG3Q9UJ98 1225 aa13.09□□□□□ -0.31
PCAT29-201ENST00000558411 RRP15Q9Y3B9 282 aaKnown RBP13.09□□□□□ -0.31
PCAT29-201ENST00000558411 MLH3Q9UHC1 1453 aa13.09□□□□□ -0.31
PCAT29-201ENST00000558411 TMEM131LA2VDJ0 1609 aa13.09□□□□□ -0.31
PCAT29-201ENST00000558411 UBTFL1P0CB47 393 aaPredicted RBP13.09□□□□□ -0.31
PCAT29-201ENST00000558411 HSP90AB4PQ58FF6 505 aa13.09□□□□□ -0.31
PCAT29-201ENST00000558411 GPR161Q8N6U8 529 aaKnown RBP13.09□□□□□ -0.31
PCAT29-201ENST00000558411 PLEKHG2Q9H7P9 1386 aa13.09□□□□□ -0.31
PCAT29-201ENST00000558411 C3P01024 1663 aa13.08□□□□□ -0.32
PCAT29-201ENST00000558411 A0A1B0GUL7 405 aa13.08□□□□□ -0.32
PCAT29-201ENST00000558411 CREB3L3Q68CJ9 461 aa13.08□□□□□ -0.32
PCAT29-201ENST00000558411 ARMCX5Q6P1M9 558 aa13.08□□□□□ -0.32
PCAT29-201ENST00000558411 REXO1L1PQ8IX06 675 aa13.08□□□□□ -0.32
PCAT29-201ENST00000558411 SLC26A8Q96RN1 970 aa13.08□□□□□ -0.32
PCAT29-201ENST00000558411 SPATA31D1Q6ZQQ2 1576 aa13.08□□□□□ -0.32
PCAT29-201ENST00000558411 RPS6KA5O75582 802 aa13.07□□□□□ -0.32
PCAT29-201ENST00000558411 SURF6O75683 361 aaKnown RBP13.07□□□□□ -0.32
PCAT29-201ENST00000558411 ACTN2P35609 894 aa13.07□□□□□ -0.32
PCAT29-201ENST00000558411 MMP14P50281 582 aa13.07□□□□□ -0.32
PCAT29-201ENST00000558411 CCDC30Q5VVM6 783 aa13.07□□□□□ -0.32
PCAT29-201ENST00000558411 JAKMIP3Q5VZ66 844 aa13.07□□□□□ -0.32
PCAT29-201ENST00000558411 ATL3Q6DD88 541 aa13.07□□□□□ -0.32
PCAT29-201ENST00000558411 SULT6B1Q6IMI4 303 aa13.07□□□□□ -0.32
PCAT29-201ENST00000558411 NME9Q86XW9 330 aa13.07□□□□□ -0.32
PCAT29-201ENST00000558411 CERS3Q8IU89 383 aa13.07□□□□□ -0.32
PCAT29-201ENST00000558411 USP44Q9H0E7 712 aa13.07□□□□□ -0.32
PCAT29-201ENST00000558411 SNRKQ9NRH2 765 aa13.07□□□□□ -0.32
PCAT29-201ENST00000558411 SLC52A1Q9NWF4 448 aa13.07□□□□□ -0.32
PCAT29-201ENST00000558411 LCMT1Q9UIC8 334 aa13.07□□□□□ -0.32
PCAT29-201ENST00000558411 TSPYL4Q9UJ04 414 aa13.07□□□□□ -0.32
PCAT29-201ENST00000558411 TRIM66O15016 1216 aa13.07□□□□□ -0.32
PCAT29-201ENST00000558411 SASH3O75995 380 aa13.07□□□□□ -0.32
PCAT29-201ENST00000558411 PSME1Q06323 249 aa13.07□□□□□ -0.32
PCAT29-201ENST00000558411 FCHSD1Q86WN1 690 aa13.07□□□□□ -0.32
PCAT29-201ENST00000558411 HOMER1Q86YM7 354 aa13.07□□□□□ -0.32
PCAT29-201ENST00000558411 ARFGAP3Q9NP61 516 aa13.07□□□□□ -0.32
PCAT29-201ENST00000558411 RCOR1Q9UKL0 485 aa13.07□□□□□ -0.32
PCAT29-201ENST00000558411 RBM8AQ9Y5S9 174 aaKnown RBP13.07□□□□□ -0.32
PCAT29-201ENST00000558411 AKAP12Q02952 1782 aa13.07□□□□□ -0.32
PCAT29-201ENST00000558411 HIP1O00291 1037 aa13.06□□□□□ -0.32
PCAT29-201ENST00000558411 KINO60870 393 aaKnown RBP13.06□□□□□ -0.32
PCAT29-201ENST00000558411 GUCY2CP25092 1073 aa13.06□□□□□ -0.32
PCAT29-201ENST00000558411 GGT6Q6P531 493 aa13.06□□□□□ -0.32
PCAT29-201ENST00000558411 BLOC1S2Q6QNY1 142 aa13.06□□□□□ -0.32
PCAT29-201ENST00000558411 CCDC73Q6ZRK6 1079 aa13.06□□□□□ -0.32
PCAT29-201ENST00000558411 MSL3Q8N5Y2 521 aaKnown RBP13.06□□□□□ -0.32
PCAT29-201ENST00000558411 AOPEPQ8N6M6 819 aa13.06□□□□□ -0.32
PCAT29-201ENST00000558411 MAP4K1Q92918 833 aa13.06□□□□□ -0.32
PCAT29-201ENST00000558411 SEC31AO94979 1220 aaKnown RBP13.06□□□□□ -0.32
PCAT29-201ENST00000558411 RPS6KB1P23443 525 aa13.06□□□□□ -0.32
PCAT29-201ENST00000558411 MAGEA9P43362 315 aa13.06□□□□□ -0.32
PCAT29-201ENST00000558411 EVCP57679 992 aa13.06□□□□□ -0.32
PCAT29-201ENST00000558411 FAM160A1Q05DH4 1040 aa13.06□□□□□ -0.32
PCAT29-201ENST00000558411 IDI1Q13907 227 aa13.06□□□□□ -0.32
PCAT29-201ENST00000558411 EIF4A2Q14240 407 aaKnown RBP13.06□□□□□ -0.32
PCAT29-201ENST00000558411 RRS1Q15050 365 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms