RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 RTL9Q8NET4 1388 aa9.94□□□□□ -0.82
RTF1-205ENST00000558298 ZC3H4Q9UPT8 1303 aaKnown RBP9.94□□□□□ -0.82
RTF1-205ENST00000558298 MRE11P49959 708 aa9.94□□□□□ -0.82
RTF1-205ENST00000558298 ZBTB38Q8NAP3 1195 aaPredicted RBP9.94□□□□□ -0.82
RTF1-205ENST00000558298 LINS1Q8NG48 757 aa9.94□□□□□ -0.82
RTF1-205ENST00000558298 MASTLQ96GX5 879 aa9.94□□□□□ -0.82
RTF1-205ENST00000558298 KIF16BQ96L93 1317 aa9.93□□□□□ -0.82
RTF1-205ENST00000558298 PI4KAP2A4QPH2 592 aa9.93□□□□□ -0.82
RTF1-205ENST00000558298 PCCAP05165 728 aaPredicted RBP9.93□□□□□ -0.82
RTF1-205ENST00000558298 IGKV5-2P06315 115 aa9.93□□□□□ -0.82
RTF1-205ENST00000558298 NPR1P16066 1061 aa9.93□□□□□ -0.82
RTF1-205ENST00000558298 NEXNQ0ZGT2 675 aa9.93□□□□□ -0.82
RTF1-205ENST00000558298 AIMP1Q12904 312 aaKnown RBP9.93□□□□□ -0.82
RTF1-205ENST00000558298 ERFEQ4G0M1 354 aa9.93□□□□□ -0.82
RTF1-205ENST00000558298 PRPF40BQ6NWY9 871 aaKnown RBP9.93□□□□□ -0.82
RTF1-205ENST00000558298 ARHGAP27Q6ZUM4 889 aa9.93□□□□□ -0.82
RTF1-205ENST00000558298 RIC3Q7Z5B4 369 aa9.93□□□□□ -0.82
RTF1-205ENST00000558298 MRPL50Q8N5N7 158 aaKnown RBP9.93□□□□□ -0.82
RTF1-205ENST00000558298 PI4KAP1Q8N8J0 262 aa9.93□□□□□ -0.82
RTF1-205ENST00000558298 EXOC6Q8TAG9 804 aa9.93□□□□□ -0.82
RTF1-205ENST00000558298 DNAAF4Q8WXU2 420 aa9.93□□□□□ -0.82
RTF1-205ENST00000558298 ARHGAP45Q92619 1136 aa9.93□□□□□ -0.82
RTF1-205ENST00000558298 CNKSR1Q969H4 720 aa9.93□□□□□ -0.82
RTF1-205ENST00000558298 NAP1L5Q96NT1 182 aaPredicted RBP9.93□□□□□ -0.82
RTF1-205ENST00000558298 WDR90Q96KV7 1748 aa9.93□□□□□ -0.82
RTF1-205ENST00000558298 KDM2BQ8NHM5 1336 aa9.92□□□□□ -0.82
RTF1-205ENST00000558298 SENP3-EIF4A1A0A087X0R7 540 aa9.92□□□□□ -0.82
RTF1-205ENST00000558298 NEURL1BA8MQ27 555 aa9.92□□□□□ -0.82
RTF1-205ENST00000558298 GPTP24298 496 aa9.92□□□□□ -0.82
RTF1-205ENST00000558298 RASSF7Q02833 373 aa9.92□□□□□ -0.82
RTF1-205ENST00000558298 FKBP5Q13451 457 aaPredicted RBP9.92□□□□□ -0.82
RTF1-205ENST00000558298 SF3B3Q15393 1217 aaKnown RBP9.92□□□□□ -0.82
RTF1-205ENST00000558298 GRIPAP1Q4V328 841 aa9.92□□□□□ -0.82
RTF1-205ENST00000558298 SOGA3Q5TF21 947 aa9.92□□□□□ -0.82
RTF1-205ENST00000558298 C9orf131Q5VYM1 1079 aa9.92□□□□□ -0.82
RTF1-205ENST00000558298 C3orf67Q6ZVT6 689 aa9.92□□□□□ -0.82
RTF1-205ENST00000558298 G2E3Q7L622 706 aa9.92□□□□□ -0.82
RTF1-205ENST00000558298 NUTM1Q86Y26 1132 aa9.92□□□□□ -0.82
RTF1-205ENST00000558298 SSH1Q8WYL5 1049 aa9.92□□□□□ -0.82
RTF1-205ENST00000558298 CRAMP1Q96RY5 1269 aa9.92□□□□□ -0.82
RTF1-205ENST00000558298 PLA2G12BQ9BX93 195 aa9.92□□□□□ -0.82
RTF1-205ENST00000558298 CWC25Q9NXE8 425 aaPredicted RBP9.92□□□□□ -0.82
RTF1-205ENST00000558298 MAP3K2Q9Y2U5 619 aa9.92□□□□□ -0.82
RTF1-205ENST00000558298 COL4A5P29400 1685 aa9.92□□□□□ -0.82
RTF1-205ENST00000558298 UTYO14607 1347 aa9.91□□□□□ -0.82
RTF1-205ENST00000558298 KIF3CO14782 793 aa9.91□□□□□ -0.82
RTF1-205ENST00000558298 ALDH1L1O75891 902 aa9.91□□□□□ -0.82
RTF1-205ENST00000558298 RARSP54136 660 aaKnown RBP9.91□□□□□ -0.82
RTF1-205ENST00000558298 CC2D2BQ6DHV5 1058 aa9.91□□□□□ -0.82
RTF1-205ENST00000558298 TMC4Q7Z404 712 aa9.91□□□□□ -0.82
RTF1-205ENST00000558298 NLRP3Q96P20 1036 aa9.91□□□□□ -0.82
RTF1-205ENST00000558298 DUOX1Q9NRD9 1551 aa9.91□□□□□ -0.82
RTF1-205ENST00000558298 TAF1P21675 1872 aa9.9□□□□□ -0.82
RTF1-205ENST00000558298 DDX11L8A8MPP1 907 aa9.9□□□□□ -0.82
RTF1-205ENST00000558298 C21orf2O43822 256 aa9.9□□□□□ -0.82
RTF1-205ENST00000558298 LMNB1P20700 586 aa9.9□□□□□ -0.82
RTF1-205ENST00000558298 ALDH1B1P30837 517 aa9.9□□□□□ -0.82
RTF1-205ENST00000558298 CASP7P55210 303 aa9.9□□□□□ -0.82
RTF1-205ENST00000558298 GCKRQ14397 625 aa9.9□□□□□ -0.82
RTF1-205ENST00000558298 BEND3Q5T5X7 828 aa9.9□□□□□ -0.82
RTF1-205ENST00000558298 ZNF622Q969S3 477 aaKnown RBP eCLIP9.9□□□□□ -0.824e-10■■□□□ 14.5
RTF1-205ENST00000558298 TRMT112Q9UI30 125 aaKnown RBP9.9□□□□□ -0.82
RTF1-205ENST00000558298 A0A1B0GUL6 1792 aa9.9□□□□□ -0.82
RTF1-205ENST00000558298 ABCC4O15439 1325 aa9.89□□□□□ -0.83
RTF1-205ENST00000558298 FAM177BA6PVY3 158 aa9.89□□□□□ -0.83
RTF1-205ENST00000558298 H7C1W4 665 aa9.89□□□□□ -0.83
RTF1-205ENST00000558298 NPHP1O15259 732 aa9.89□□□□□ -0.83
RTF1-205ENST00000558298 GTF2E1P29083 439 aaPredicted RBP9.89□□□□□ -0.83
RTF1-205ENST00000558298 C1QTNF8P60827 252 aa9.89□□□□□ -0.83
RTF1-205ENST00000558298 SLC51AQ86UW1 340 aa9.89□□□□□ -0.83
RTF1-205ENST00000558298 MYD88Q99836 296 aa9.89□□□□□ -0.83
RTF1-205ENST00000558298 GPBP1L1Q9HC44 474 aaPredicted RBP9.89□□□□□ -0.83
RTF1-205ENST00000558298 RNF181Q9P0P0 153 aa9.89□□□□□ -0.83
RTF1-205ENST00000558298 FSD2A1L4K1 749 aa9.88□□□□□ -0.83
RTF1-205ENST00000558298 ATP5J2-PTCD1G3V325 749 aa9.88□□□□□ -0.83
RTF1-205ENST00000558298 IRS4O14654 1257 aaPredicted RBP9.88□□□□□ -0.83
RTF1-205ENST00000558298 PDE8AO60658 829 aa9.88□□□□□ -0.83
RTF1-205ENST00000558298 FRAT2O75474 233 aaPredicted RBP9.88□□□□□ -0.83
RTF1-205ENST00000558298 SKOR2Q2VWA4 1001 aaPredicted RBP9.88□□□□□ -0.83
RTF1-205ENST00000558298 OLFM4Q6UX06 510 aa9.88□□□□□ -0.83
RTF1-205ENST00000558298 SYNE4Q8N205 404 aa9.88□□□□□ -0.83
RTF1-205ENST00000558298 ANP32BQ92688 251 aaKnown RBP9.88□□□□□ -0.83
RTF1-205ENST00000558298 TRIM44Q96DX7 344 aaPredicted RBP9.88□□□□□ -0.83
RTF1-205ENST00000558298 API5Q9BZZ5 524 aaKnown RBP9.88□□□□□ -0.83
RTF1-205ENST00000558298 TAOK3Q9H2K8 898 aa9.88□□□□□ -0.83
RTF1-205ENST00000558298 SMC4Q9NTJ3 1288 aa9.88□□□□□ -0.83
RTF1-205ENST00000558298 PODXL2Q9NZ53 605 aa9.88□□□□□ -0.83
RTF1-205ENST00000558298 ADAMTSL1Q8N6G6 1762 aa9.88□□□□□ -0.83
RTF1-205ENST00000558298 CCDC93Q567U6 631 aa9.87□□□□□ -0.83
RTF1-205ENST00000558298 RBM17Q96I25 401 aaKnown RBP9.87□□□□□ -0.83
RTF1-205ENST00000558298 PSMD1Q99460 953 aa9.87□□□□□ -0.83
RTF1-205ENST00000558298 NMRK2Q9NPI5 230 aa9.87□□□□□ -0.83
RTF1-205ENST00000558298 GRM8O00222 908 aa9.86□□□□□ -0.83
RTF1-205ENST00000558298 IPO8O15397 1037 aaKnown RBP9.86□□□□□ -0.83
RTF1-205ENST00000558298 BBOX1O75936 387 aa9.86□□□□□ -0.83
RTF1-205ENST00000558298 CSF1RP07333 972 aa9.86□□□□□ -0.83
RTF1-205ENST00000558298 CCT4P50991 539 aaKnown RBP9.86□□□□□ -0.83
RTF1-205ENST00000558298 CTSWP56202 376 aa9.86□□□□□ -0.83
RTF1-205ENST00000558298 FKBP4Q02790 459 aaKnown RBP eCLIP9.86□□□□□ -0.83
RTF1-205ENST00000558298 GRAPQ13588 217 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms