RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 LRFN2Q9ULH4 789 aa6.56□□□□□ -1.36
LRRC28-205ENST00000558248 MTMR7Q9Y216 660 aa6.56□□□□□ -1.36
LRRC28-205ENST00000558248 WDR62O43379 1518 aa6.55□□□□□ -1.36
LRRC28-205ENST00000558248 BAZ1BQ9UIG0 1483 aaKnown RBP6.55□□□□□ -1.36
LRRC28-205ENST00000558248 NFKB1P19838 968 aa6.55□□□□□ -1.36
LRRC28-205ENST00000558248 DGKGP49619 791 aa6.55□□□□□ -1.36
LRRC28-205ENST00000558248 NAA30Q147X3 362 aaPredicted RBP6.55□□□□□ -1.36
LRRC28-205ENST00000558248 B4GALNT3Q6L9W6 998 aa6.55□□□□□ -1.36
LRRC28-205ENST00000558248 ABTB2Q8N961 1025 aa6.55□□□□□ -1.36
LRRC28-205ENST00000558248 IGFLR1Q9H665 355 aa6.55□□□□□ -1.36
LRRC28-205ENST00000558248 SPDYE3A6NKU9 549 aa6.54□□□□□ -1.36
LRRC28-205ENST00000558248 RGL4Q8IZJ4 473 aa6.54□□□□□ -1.36
LRRC28-205ENST00000558248 GSX2Q9BZM3 304 aa6.54□□□□□ -1.36
LRRC28-205ENST00000558248 USTQ9Y2C2 406 aa6.54□□□□□ -1.36
LRRC28-205ENST00000558248 RTCBQ9Y3I0 505 aaKnown RBP6.54□□□□□ -1.36
LRRC28-205ENST00000558248 CMTR1Q8N1G2 835 aaKnown RBP6.53□□□□□ -1.36
LRRC28-205ENST00000558248 PIK3R5Q8WYR1 880 aa6.53□□□□□ -1.36
LRRC28-205ENST00000558248 SAP130Q9H0E3 1048 aa6.53□□□□□ -1.36
LRRC28-205ENST00000558248 STIM2Q9P246 746 aa6.53□□□□□ -1.36
LRRC28-205ENST00000558248 CADPSQ9ULU8 1353 aa6.53□□□□□ -1.36
LRRC28-205ENST00000558248 TMEM88BA6NKF7 163 aa6.52□□□□□ -1.37
LRRC28-205ENST00000558248 XYLBO75191 536 aa6.52□□□□□ -1.37
LRRC28-205ENST00000558248 MAP3K6O95382 1288 aa6.52□□□□□ -1.37
LRRC28-205ENST00000558248 RARAP10276 462 aa6.52□□□□□ -1.37
LRRC28-205ENST00000558248 PDE4CQ08493 712 aa6.52□□□□□ -1.37
LRRC28-205ENST00000558248 KRT25Q7Z3Z0 450 aa6.52□□□□□ -1.37
LRRC28-205ENST00000558248 ETFBKMTQ8IXQ9 262 aa6.52□□□□□ -1.37
LRRC28-205ENST00000558248 FNDC3AQ9Y2H6 1198 aaKnown RBP6.52□□□□□ -1.37
LRRC28-205ENST00000558248 SMARCA4P51532 1647 aa6.51□□□□□ -1.37
LRRC28-205ENST00000558248 M0R082 166 aa6.51□□□□□ -1.37
LRRC28-205ENST00000558248 OPLAHO14841 1288 aa6.51□□□□□ -1.37
LRRC28-205ENST00000558248 GSK3AP49840 483 aa6.51□□□□□ -1.37
LRRC28-205ENST00000558248 LINC00114Q6XXX2 140 aa6.51□□□□□ -1.37
LRRC28-205ENST00000558248 CAPN12Q6ZSI9 719 aa6.51□□□□□ -1.37
LRRC28-205ENST00000558248 ZNF417Q8TAU3 575 aa6.51□□□□□ -1.37
LRRC28-205ENST00000558248 ZNF587Q96SQ5 575 aaPredicted RBP6.51□□□□□ -1.37
LRRC28-205ENST00000558248 MDFIQ99750 246 aa6.51□□□□□ -1.37
LRRC28-205ENST00000558248 DNAJB12Q9NXW2 375 aaKnown RBP6.51□□□□□ -1.37
LRRC28-205ENST00000558248 SLC6A14Q9UN76 642 aa6.51□□□□□ -1.37
LRRC28-205ENST00000558248 TNFRSF10BO14763 440 aa6.5□□□□□ -1.37
LRRC28-205ENST00000558248 LILRB5O75023 590 aa6.5□□□□□ -1.37
LRRC28-205ENST00000558248 EGFRP00533 1210 aa6.5□□□□□ -1.37
LRRC28-205ENST00000558248 SSFA2P28290 1259 aa6.5□□□□□ -1.37
LRRC28-205ENST00000558248 ZAP70P43403 619 aa6.5□□□□□ -1.37
LRRC28-205ENST00000558248 DHX32Q7L7V1 743 aaKnown RBP6.5□□□□□ -1.37
LRRC28-205ENST00000558248 HELQQ8TDG4 1101 aa6.5□□□□□ -1.37
LRRC28-205ENST00000558248 DCAF5Q96JK2 942 aa6.5□□□□□ -1.37
LRRC28-205ENST00000558248 SLAIN2Q9P270 581 aa6.5□□□□□ -1.37
LRRC28-205ENST00000558248 SEPT3Q9UH03 358 aa6.5□□□□□ -1.37
LRRC28-205ENST00000558248 SASH3O75995 380 aa6.49□□□□□ -1.37
LRRC28-205ENST00000558248 PSAPP07602 524 aa6.49□□□□□ -1.37
LRRC28-205ENST00000558248 PCSK2P16519 638 aa6.49□□□□□ -1.37
LRRC28-205ENST00000558248 HOXB4P17483 251 aaPredicted RBP6.49□□□□□ -1.37
LRRC28-205ENST00000558248 TARSP26639 723 aaKnown RBP6.49□□□□□ -1.37
LRRC28-205ENST00000558248 GRNP28799 593 aaKnown RBP6.49□□□□□ -1.37
LRRC28-205ENST00000558248 PRRT3Q5FWE3 981 aa6.49□□□□□ -1.37
LRRC28-205ENST00000558248 FAM35AQ86V20 835 aa6.49□□□□□ -1.37
LRRC28-205ENST00000558248 KCTD17Q8N5Z5 321 aa6.49□□□□□ -1.37
LRRC28-205ENST00000558248 TTC16Q8NEE8 873 aa6.49□□□□□ -1.37
LRRC28-205ENST00000558248 PRDM6Q9NQX0 595 aa6.49□□□□□ -1.37
LRRC28-205ENST00000558248 USP20Q9Y2K6 914 aa6.49□□□□□ -1.37
LRRC28-205ENST00000558248 ARAP1Q96P48 1450 aa6.48□□□□□ -1.37
LRRC28-205ENST00000558248 UBAP1LF5GYI3 381 aa6.48□□□□□ -1.37
LRRC28-205ENST00000558248 IGHA1P01876 353 aa6.48□□□□□ -1.37
LRRC28-205ENST00000558248 ALBP02768 609 aa6.48□□□□□ -1.37
LRRC28-205ENST00000558248 RPLP1P05386 114 aaKnown RBP6.48□□□□□ -1.37
LRRC28-205ENST00000558248 HMGB1P09429 215 aaKnown RBP6.48□□□□□ -1.37
LRRC28-205ENST00000558248 MICALL1Q8N3F8 863 aa6.48□□□□□ -1.37
LRRC28-205ENST00000558248 JPH1Q9HDC5 661 aaPredicted RBP6.48□□□□□ -1.37
LRRC28-205ENST00000558248 RGS9O75916 674 aaPredicted RBP6.47□□□□□ -1.37
LRRC28-205ENST00000558248 NRLP54845 237 aa6.47□□□□□ -1.37
LRRC28-205ENST00000558248 GPLD1P80108 840 aa6.47□□□□□ -1.37
LRRC28-205ENST00000558248 PLAURQ03405 335 aa6.47□□□□□ -1.37
LRRC28-205ENST00000558248 GPAT2Q6NUI2 795 aa6.47□□□□□ -1.37
LRRC28-205ENST00000558248 PSAPL1Q6NUJ1 521 aa6.47□□□□□ -1.37
LRRC28-205ENST00000558248 NLRP13Q86W25 1043 aa6.47□□□□□ -1.37
LRRC28-205ENST00000558248 GPR152Q8TDT2 470 aa6.47□□□□□ -1.37
LRRC28-205ENST00000558248 GTF3C2Q8WUA4 911 aaPredicted RBP6.47□□□□□ -1.37
LRRC28-205ENST00000558248 PLVAPQ9BX97 442 aa6.47□□□□□ -1.37
LRRC28-205ENST00000558248 RBSNQ9H1K0 784 aa6.47□□□□□ -1.37
LRRC28-205ENST00000558248 TLR7Q9NYK1 1049 aaKnown RBP6.47□□□□□ -1.37
LRRC28-205ENST00000558248 ZFATQ9P243 1243 aa6.47□□□□□ -1.37
LRRC28-205ENST00000558248 STARD13Q9Y3M8 1113 aa6.47□□□□□ -1.37
LRRC28-205ENST00000558248 KCNMB2Q9Y691 235 aa6.47□□□□□ -1.37
LRRC28-205ENST00000558248 SPATA31C1P0DKV0 1188 aa6.46□□□□□ -1.38
LRRC28-205ENST00000558248 CPB1P15086 417 aa6.46□□□□□ -1.38
LRRC28-205ENST00000558248 NOM1Q5C9Z4 860 aaKnown RBP6.46□□□□□ -1.38
LRRC28-205ENST00000558248 ALKBH2Q6NS38 261 aa6.46□□□□□ -1.38
LRRC28-205ENST00000558248 ELMSAN1Q6PJG2 1045 aa6.46□□□□□ -1.38
LRRC28-205ENST00000558248 TRPM4Q8TD43 1214 aa6.46□□□□□ -1.38
LRRC28-205ENST00000558248 NUDT8Q8WV74 236 aa6.46□□□□□ -1.38
LRRC28-205ENST00000558248 TRIM11Q96F44 468 aa6.46□□□□□ -1.38
LRRC28-205ENST00000558248 SUV39H2Q9H5I1 410 aa6.46□□□□□ -1.38
LRRC28-205ENST00000558248 CEP164Q9UPV0 1460 aa6.46□□□□□ -1.38
LRRC28-205ENST00000558248 FAM13AO94988 1023 aa6.45□□□□□ -1.38
LRRC28-205ENST00000558248 EIF2AK2P19525 551 aaKnown RBP6.45□□□□□ -1.38
LRRC28-205ENST00000558248 COL8A1P27658 744 aa6.45□□□□□ -1.38
LRRC28-205ENST00000558248 SOX18P35713 384 aa6.45□□□□□ -1.38
LRRC28-205ENST00000558248 MLLT1Q03111 559 aaPredicted RBP6.45□□□□□ -1.38
LRRC28-205ENST00000558248 SF3B2Q13435 895 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms