RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 UTYO14607 1347 aa32.22■■■□□ 2.75
SMAD6-202ENST00000557916 ZNF219Q9P2Y4 722 aaPredicted RBP32.21■■■□□ 2.75
SMAD6-202ENST00000557916 FTSJ3Q8IY81 847 aaKnown RBP32.2■■■□□ 2.75
SMAD6-202ENST00000557916 DZIP1LQ8IYY4 767 aaKnown RBP32.2■■■□□ 2.75
SMAD6-202ENST00000557916 TTLL11Q8NHH1 800 aa32.2■■■□□ 2.75
SMAD6-202ENST00000557916 CCDC85AQ96PX6 553 aaPredicted RBP32.2■■■□□ 2.75
SMAD6-202ENST00000557916 SLX4Q8IY92 1834 aa32.19■■■□□ 2.74
SMAD6-202ENST00000557916 C21orf2O43822 256 aa32.18■■■□□ 2.74
SMAD6-202ENST00000557916 GRAPQ13588 217 aa32.17■■■□□ 2.74
SMAD6-202ENST00000557916 TMEM57Q8N5G2 664 aa32.17■■■□□ 2.74
SMAD6-202ENST00000557916 GRAPLQ8TC17 118 aaPredicted RBP32.17■■■□□ 2.74
SMAD6-202ENST00000557916 ARFGEF1Q9Y6D6 1849 aa32.17■■■□□ 2.74
SMAD6-202ENST00000557916 PLIN1O60240 522 aa32.17■■■□□ 2.74
SMAD6-202ENST00000557916 SUCLG2Q96I99 432 aa32.17■■■□□ 2.74
SMAD6-202ENST00000557916 FOXO4P98177 505 aa32.16■■■□□ 2.74
SMAD6-202ENST00000557916 EPHA10Q5JZY3 1008 aa32.16■■■□□ 2.74
SMAD6-202ENST00000557916 ARHGAP27Q6ZUM4 889 aa32.16■■■□□ 2.74
SMAD6-202ENST00000557916 C7orf43Q8WVR3 580 aa32.16■■■□□ 2.74
SMAD6-202ENST00000557916 SEC31BQ9NQW1 1179 aa32.16■■■□□ 2.74
SMAD6-202ENST00000557916 CACNA1SQ13698 1873 aa32.16■■■□□ 2.74
SMAD6-202ENST00000557916 PPEF1O14829 653 aaPredicted RBP32.15■■■□□ 2.74
SMAD6-202ENST00000557916 BBOX1O75936 387 aa32.15■■■□□ 2.74
SMAD6-202ENST00000557916 CSF1RP07333 972 aa32.15■■■□□ 2.74
SMAD6-202ENST00000557916 MS4A1P11836 297 aa32.15■■■□□ 2.74
SMAD6-202ENST00000557916 RLBP1P12271 317 aa32.14■■■□□ 2.74
SMAD6-202ENST00000557916 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.14■■■□□ 2.74
SMAD6-202ENST00000557916 CELF1Q92879 486 aaKnown RBP32.14■■■□□ 2.74
SMAD6-202ENST00000557916 GREM2Q9H772 168 aa32.14■■■□□ 2.74
SMAD6-202ENST00000557916 KAZALD1Q96I82 304 aa32.13■■■□□ 2.73
SMAD6-202ENST00000557916 MYH3P11055 1940 aa32.13■■■□□ 2.73
SMAD6-202ENST00000557916 UTRNP46939 3433 aa32.12■■■□□ 2.73
SMAD6-202ENST00000557916 UBTFL1P0CB47 393 aaPredicted RBP32.12■■■□□ 2.73
SMAD6-202ENST00000557916 SOGA3Q5TF21 947 aa32.12■■■□□ 2.73
SMAD6-202ENST00000557916 PANK1Q8TE04 598 aa32.12■■■□□ 2.73
SMAD6-202ENST00000557916 RTL9Q8NET4 1388 aa32.12■■■□□ 2.73
SMAD6-202ENST00000557916 LMBR1LQ6UX01 489 aa32.11■■■□□ 2.73
SMAD6-202ENST00000557916 MEIS3Q99687 375 aa32.11■■■□□ 2.73
SMAD6-202ENST00000557916 RPS8P62241 208 aaKnown RBP32.1■■■□□ 2.73
SMAD6-202ENST00000557916 FAM161AQ3B820 660 aa32.1■■■□□ 2.73
SMAD6-202ENST00000557916 OLFM4Q6UX06 510 aa32.1■■■□□ 2.73
SMAD6-202ENST00000557916 CHMP3Q9Y3E7 222 aa32.1■■■□□ 2.73
SMAD6-202ENST00000557916 ITPRIPQ8IWB1 547 aa32.09■■■□□ 2.73
SMAD6-202ENST00000557916 BICC1Q9H694 974 aaKnown RBP32.09■■■□□ 2.73
SMAD6-202ENST00000557916 ATP6V0A2Q9Y487 856 aa32.09■■■□□ 2.73
SMAD6-202ENST00000557916 TAF1P21675 1872 aa32.09■■■□□ 2.73
SMAD6-202ENST00000557916 GNAI3P08754 354 aa32.09■■■□□ 2.73
SMAD6-202ENST00000557916 CCDC93Q567U6 631 aa32.09■■■□□ 2.73
SMAD6-202ENST00000557916 TMC4Q7Z404 712 aa32.09■■■□□ 2.73
SMAD6-202ENST00000557916 CDC5LQ99459 802 aaKnown RBP32.09■■■□□ 2.73
SMAD6-202ENST00000557916 TMX4Q9H1E5 349 aaPredicted RBP32.09■■■□□ 2.73
SMAD6-202ENST00000557916 HDAC5Q9UQL6 1122 aa32.09■■■□□ 2.73
SMAD6-202ENST00000557916 ITGA6P23229 1130 aa32.08■■■□□ 2.73
SMAD6-202ENST00000557916 CC2D2BQ6DHV5 1058 aa32.08■■■□□ 2.73
SMAD6-202ENST00000557916 SP8Q8IXZ3 490 aa32.08■■■□□ 2.73
SMAD6-202ENST00000557916 SLC51AQ86UW1 340 aa32.07■■■□□ 2.72
SMAD6-202ENST00000557916 ANKRD18AQ8IVF6 992 aa32.07■■■□□ 2.72
SMAD6-202ENST00000557916 ANKRD44Q8N8A2 993 aa32.06■■■□□ 2.72
SMAD6-202ENST00000557916 COL4A1P02462 1669 aa32.06■■■□□ 2.72
SMAD6-202ENST00000557916 ANKRD18BA2A2Z9 1011 aa32.05■■■□□ 2.72
SMAD6-202ENST00000557916 IFIT5Q13325 482 aaKnown RBP32.05■■■□□ 2.72
SMAD6-202ENST00000557916 RABL6Q3YEC7 729 aaPredicted RBP32.05■■■□□ 2.72
SMAD6-202ENST00000557916 RTKN2Q8IZC4 609 aa32.05■■■□□ 2.72
SMAD6-202ENST00000557916 LRRFIP2Q9Y608 721 aaKnown RBP32.05■■■□□ 2.72
SMAD6-202ENST00000557916 NFKBIEO00221 500 aa32.04■■■□□ 2.72
SMAD6-202ENST00000557916 PDE3AQ14432 1141 aa32.03■■■□□ 2.72
SMAD6-202ENST00000557916 CCDC57Q2TAC2 916 aa32.03■■■□□ 2.72
SMAD6-202ENST00000557916 RASSF7Q02833 373 aa32.02■■■□□ 2.72
SMAD6-202ENST00000557916 GRIPAP1Q4V328 841 aa32.02■■■□□ 2.72
SMAD6-202ENST00000557916 IGHMBP2P38935 993 aaKnown RBP32.01■■■□□ 2.72
SMAD6-202ENST00000557916 RRP1P56182 461 aaKnown RBP32.01■■■□□ 2.72
SMAD6-202ENST00000557916 C20orf194Q5TEA3 1177 aa32.01■■■□□ 2.72
SMAD6-202ENST00000557916 TAOK3Q9H2K8 898 aa32.01■■■□□ 2.72
SMAD6-202ENST00000557916 ZBTB7BO15156 539 aaPredicted RBP32■■■□□ 2.71
SMAD6-202ENST00000557916 MVPQ14764 893 aaKnown RBP32■■■□□ 2.71
SMAD6-202ENST00000557916 BSDC1Q9NW68 430 aaPredicted RBP32■■■□□ 2.71
SMAD6-202ENST00000557916 COG6Q9Y2V7 657 aa32■■■□□ 2.71
SMAD6-202ENST00000557916 GNAI2P04899 355 aa32■■■□□ 2.71
SMAD6-202ENST00000557916 FKBP4Q02790 459 aaKnown RBP eCLIP31.99■■■□□ 2.71
SMAD6-202ENST00000557916 MPHOSPH8Q99549 860 aa31.99■■■□□ 2.71
SMAD6-202ENST00000557916 LTBP3Q9NS15 1303 aa31.99■■■□□ 2.71
SMAD6-202ENST00000557916 FER1L6Q2WGJ9 1857 aa31.98■■■□□ 2.71
SMAD6-202ENST00000557916 SNED1Q8TER0 1413 aa31.98■■■□□ 2.71
SMAD6-202ENST00000557916 TAF7LQ5H9L4 462 aa31.98■■■□□ 2.71
SMAD6-202ENST00000557916 MPNDQ8N594 471 aa31.98■■■□□ 2.71
SMAD6-202ENST00000557916 ZNF594Q96JF6 807 aaPredicted RBP31.97■■■□□ 2.71
SMAD6-202ENST00000557916 PSMD1Q99460 953 aa31.97■■■□□ 2.71
SMAD6-202ENST00000557916 DPP8Q6V1X1 898 aaPredicted RBP31.96■■■□□ 2.71
SMAD6-202ENST00000557916 DDX19BQ9UMR2 479 aa31.96■■■□□ 2.71
SMAD6-202ENST00000557916 LMNB1P20700 586 aa31.95■■■□□ 2.71
SMAD6-202ENST00000557916 NSFL1CQ9UNZ2 370 aaKnown RBP31.95■■■□□ 2.71
SMAD6-202ENST00000557916 LRRC37AA6NMS7 1700 aa31.94■■■□□ 2.7
SMAD6-202ENST00000557916 PRELPP51888 382 aa31.94■■■□□ 2.7
SMAD6-202ENST00000557916 GPSM2P81274 684 aa31.94■■■□□ 2.7
SMAD6-202ENST00000557916 C9orf131Q5VYM1 1079 aa31.93■■■□□ 2.7
SMAD6-202ENST00000557916 MINPP1Q9UNW1 487 aa31.93■■■□□ 2.7
SMAD6-202ENST00000557916 LDHAL6AQ6ZMR3 332 aa31.92■■■□□ 2.7
SMAD6-202ENST00000557916 ZNF277Q9NRM2 450 aaPredicted RBP31.92■■■□□ 2.7
SMAD6-202ENST00000557916 RNF181Q9P0P0 153 aa31.92■■■□□ 2.7
SMAD6-202ENST00000557916 ANKIB1Q9P2G1 1089 aa31.92■■■□□ 2.7
SMAD6-202ENST00000557916 RTFDC1Q9BY42 306 aaPredicted RBP31.92■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms