RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 CACNA1FO60840 1977 aa21.44■■□□□ 1.02
NEDD4-212ENST00000557845 PCCAP05165 728 aaPredicted RBP21.43■■□□□ 1.02
NEDD4-212ENST00000557845 ZNF541Q9H0D2 1346 aa21.43■■□□□ 1.02
NEDD4-212ENST00000557845 HSP90B1P14625 803 aaKnown RBP21.42■■□□□ 1.02
NEDD4-212ENST00000557845 APLP1P51693 650 aa21.42■■□□□ 1.02
NEDD4-212ENST00000557845 TMC4Q7Z404 712 aa21.42■■□□□ 1.02
NEDD4-212ENST00000557845 LARGE2Q8N3Y3 721 aa21.42■■□□□ 1.02
NEDD4-212ENST00000557845 JARID2Q92833 1246 aaPredicted RBP21.42■■□□□ 1.02
NEDD4-212ENST00000557845 L3MBTL3Q96JM7 780 aaPredicted RBP21.42■■□□□ 1.02
NEDD4-212ENST00000557845 RTFDC1Q9BY42 306 aaPredicted RBP21.42■■□□□ 1.02
NEDD4-212ENST00000557845 VPS33BQ9H267 617 aa21.42■■□□□ 1.02
NEDD4-212ENST00000557845 MYH16Q9H6N6 1097 aa21.42■■□□□ 1.02
NEDD4-212ENST00000557845 IGKV5-2P06315 115 aa21.41■■□□□ 1.02
NEDD4-212ENST00000557845 NEXNQ0ZGT2 675 aa21.41■■□□□ 1.02
NEDD4-212ENST00000557845 DPP8Q6V1X1 898 aaPredicted RBP21.41■■□□□ 1.02
NEDD4-212ENST00000557845 MPNDQ8N594 471 aa21.41■■□□□ 1.02
NEDD4-212ENST00000557845 SUPT20HQ8NEM7 779 aa21.41■■□□□ 1.02
NEDD4-212ENST00000557845 CELF1Q92879 486 aaKnown RBP21.41■■□□□ 1.02
NEDD4-212ENST00000557845 COL4A5P29400 1685 aa21.4■■□□□ 1.02
NEDD4-212ENST00000557845 IQCA1LA6NCM1 817 aa21.4■■□□□ 1.02
NEDD4-212ENST00000557845 PDE8AO60658 829 aa21.4■■□□□ 1.02
NEDD4-212ENST00000557845 FLIIQ13045 1269 aa21.4■■□□□ 1.02
NEDD4-212ENST00000557845 SCN4AP35499 1836 aa21.4■■□□□ 1.02
NEDD4-212ENST00000557845 ZNF521Q96K83 1311 aa21.39■■□□□ 1.01
NEDD4-212ENST00000557845 PPIP5K2O43314 1243 aa21.39■■□□□ 1.01
NEDD4-212ENST00000557845 EIF6P56537 245 aaKnown RBP21.39■■□□□ 1.01
NEDD4-212ENST00000557845 GPC2Q8N158 579 aa21.39■■□□□ 1.01
NEDD4-212ENST00000557845 RPS8P62241 208 aaKnown RBP21.38■■□□□ 1.01
NEDD4-212ENST00000557845 AOC3Q16853 763 aa21.38■■□□□ 1.01
NEDD4-212ENST00000557845 CWF19L2Q2TBE0 894 aaKnown RBP21.38■■□□□ 1.01
NEDD4-212ENST00000557845 CDHR2Q9BYE9 1310 aa21.37■■□□□ 1.01
NEDD4-212ENST00000557845 NEURL1BA8MQ27 555 aa21.37■■□□□ 1.01
NEDD4-212ENST00000557845 FKBP5Q13451 457 aaPredicted RBP21.37■■□□□ 1.01
NEDD4-212ENST00000557845 NIM1KQ8IY84 436 aa21.37■■□□□ 1.01
NEDD4-212ENST00000557845 TAF1DQ9H5J8 278 aaPredicted RBP21.37■■□□□ 1.01
NEDD4-212ENST00000557845 CCDC152Q4G0S7 254 aa21.36■■□□□ 1.01
NEDD4-212ENST00000557845 SEC31BQ9NQW1 1179 aa21.36■■□□□ 1.01
NEDD4-212ENST00000557845 LRRC37AA6NMS7 1700 aa21.35■■□□□ 1.01
NEDD4-212ENST00000557845 COL4A1P02462 1669 aa21.35■■□□□ 1.01
NEDD4-212ENST00000557845 DNAAF4Q8WXU2 420 aa21.35■■□□□ 1.01
NEDD4-212ENST00000557845 HACL1Q9UJ83 578 aa21.35■■□□□ 1.01
NEDD4-212ENST00000557845 NSFL1CQ9UNZ2 370 aaKnown RBP21.35■■□□□ 1.01
NEDD4-212ENST00000557845 GJA3Q9Y6H8 435 aa21.35■■□□□ 1.01
NEDD4-212ENST00000557845 CEP350Q5VT06 3117 aa21.34■■□□□ 1.01
NEDD4-212ENST00000557845 H7C1W4 665 aa21.34■■□□□ 1.01
NEDD4-212ENST00000557845 CCER2I3L3R5 266 aa21.34■■□□□ 1.01
NEDD4-212ENST00000557845 POTEIP0CG38 1075 aa21.34■■□□□ 1.01
NEDD4-212ENST00000557845 POTEJP0CG39 1038 aa21.34■■□□□ 1.01
NEDD4-212ENST00000557845 KIAA2012Q0VF49 1180 aa21.34■■□□□ 1.01
NEDD4-212ENST00000557845 CHADLQ6NUI6 762 aa21.34■■□□□ 1.01
NEDD4-212ENST00000557845 CCDC85AQ96PX6 553 aaPredicted RBP21.34■■□□□ 1.01
NEDD4-212ENST00000557845 ZNRF3Q9ULT6 936 aa21.34■■□□□ 1.01
NEDD4-212ENST00000557845 DNAJC5GQ8N7S2 189 aa21.33■■□□□ 1.01
NEDD4-212ENST00000557845 EPHX2P34913 555 aa21.32■■□□□ 1
NEDD4-212ENST00000557845 GPSM2P81274 684 aa21.32■■□□□ 1
NEDD4-212ENST00000557845 HTRA3P83110 453 aa21.32■■□□□ 1
NEDD4-212ENST00000557845 GCKRQ14397 625 aa21.32■■□□□ 1
NEDD4-212ENST00000557845 LINS1Q8NG48 757 aa21.32■■□□□ 1
NEDD4-212ENST00000557845 TTLL11Q8NHH1 800 aa21.32■■□□□ 1
NEDD4-212ENST00000557845 CTSWP56202 376 aa21.31■■□□□ 1
NEDD4-212ENST00000557845 CXCL9Q07325 125 aa21.31■■□□□ 1
NEDD4-212ENST00000557845 WASHC4Q2M389 1173 aa21.31■■□□□ 1
NEDD4-212ENST00000557845 UBE3BQ7Z3V4 1068 aa21.31■■□□□ 1
NEDD4-212ENST00000557845 LDHDQ86WU2 507 aa21.31■■□□□ 1
NEDD4-212ENST00000557845 POLLQ9UGP5 575 aa21.31■■□□□ 1
NEDD4-212ENST00000557845 MYH3P11055 1940 aa21.31■■□□□ 1
NEDD4-212ENST00000557845 DUOX1Q9NRD9 1551 aa21.31■■□□□ 1
NEDD4-212ENST00000557845 C6orf229H3BNL8 230 aa21.3■■□□□ 1
NEDD4-212ENST00000557845 EAPPQ56P03 285 aaPredicted RBP21.3■■□□□ 1
NEDD4-212ENST00000557845 PNMA8AQ86V59 439 aaPredicted RBP21.3■■□□□ 1
NEDD4-212ENST00000557845 E9PSI1 815 aa21.29■■□□□ 1
NEDD4-212ENST00000557845 F6X3S4 739 aa21.29■■□□□ 1
NEDD4-212ENST00000557845 SCNN1DP51172 638 aa21.29■■□□□ 1
NEDD4-212ENST00000557845 ANKRD18AQ8IVF6 992 aa21.29■■□□□ 1
NEDD4-212ENST00000557845 PODXL2Q9NZ53 605 aa21.29■■□□□ 1
NEDD4-212ENST00000557845 LMOD1P29536 600 aaPredicted RBP21.28■■□□□ 1
NEDD4-212ENST00000557845 CASP7P55210 303 aa21.28■■□□□ 1
NEDD4-212ENST00000557845 SLFN5Q08AF3 891 aa21.28■■□□□ 1
NEDD4-212ENST00000557845 TBC1D16Q8TBP0 767 aa21.28■■□□□ 1
NEDD4-212ENST00000557845 PLA2G12BQ9BX93 195 aa21.28■■□□□ 1
NEDD4-212ENST00000557845 CLEC11AQ9Y240 323 aa21.28■■□□□ 1
NEDD4-212ENST00000557845 LTBP1Q14766 1721 aa21.27■■□□□ 1
NEDD4-212ENST00000557845 RIMBP2O15034 1052 aa21.27■■□□□ 1
NEDD4-212ENST00000557845 EPS15P42566 896 aa21.27■■□□□ 1
NEDD4-212ENST00000557845 BEND3Q5T5X7 828 aa21.27■■□□□ 1
NEDD4-212ENST00000557845 CIAPIN1Q6FI81 312 aa21.27■■□□□ 1
NEDD4-212ENST00000557845 CDC5LQ99459 802 aaKnown RBP21.27■■□□□ 1
NEDD4-212ENST00000557845 EYA3Q99504 573 aa21.27■■□□□ 1
NEDD4-212ENST00000557845 GREM2Q9H772 168 aa21.27■■□□□ 1
NEDD4-212ENST00000557845 ANKIB1Q9P2G1 1089 aa21.27■■□□□ 1
NEDD4-212ENST00000557845 YDJCA8MPS7 323 aa21.26■□□□□ 0.99
NEDD4-212ENST00000557845 RAD17O75943 681 aa21.26■□□□□ 0.99
NEDD4-212ENST00000557845 TNIP1Q15025 636 aa21.26■□□□□ 0.99
NEDD4-212ENST00000557845 ADAMTSL1Q8N6G6 1762 aa21.25■□□□□ 0.99
NEDD4-212ENST00000557845 RTL9Q8NET4 1388 aa21.25■□□□□ 0.99
NEDD4-212ENST00000557845 ZC3H12CQ9C0D7 883 aaKnown RBP21.25■□□□□ 0.99
NEDD4-212ENST00000557845 ITGBL1O95965 494 aaPredicted RBP21.24■□□□□ 0.99
NEDD4-212ENST00000557845 CSF1RP07333 972 aa21.24■□□□□ 0.99
NEDD4-212ENST00000557845 CDCA7LQ96GN5 454 aa21.24■□□□□ 0.99
NEDD4-212ENST00000557845 GPR101Q96P66 508 aaPredicted RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms