RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 CPLX3Q8WVH0 158 aa5.25□□□□□ -1.57
TDP1-217ENST00000557782 MARVELD3Q96A59 401 aa5.25□□□□□ -1.57
TDP1-217ENST00000557782 MYH16Q9H6N6 1097 aa5.25□□□□□ -1.57
TDP1-217ENST00000557782 SUGT1Q9Y2Z0 365 aa5.25□□□□□ -1.57
TDP1-217ENST00000557782 HRH3Q9Y5N1 445 aa5.25□□□□□ -1.57
TDP1-217ENST00000557782 MRVI1Q9Y6F6 885 aa5.25□□□□□ -1.57
TDP1-217ENST00000557782 POTECB2RU33 542 aa5.24□□□□□ -1.57
TDP1-217ENST00000557782 PARNO95453 639 aaKnown RBP5.24□□□□□ -1.57
TDP1-217ENST00000557782 S100BP04271 92 aaPredicted RBP5.24□□□□□ -1.57
TDP1-217ENST00000557782 RLBP1P12271 317 aa5.24□□□□□ -1.57
TDP1-217ENST00000557782 ETFBP38117 255 aa5.24□□□□□ -1.57
TDP1-217ENST00000557782 EIF4A3P38919 411 aaKnown RBP5.24□□□□□ -1.57
TDP1-217ENST00000557782 CENPCQ03188 943 aa5.24□□□□□ -1.57
TDP1-217ENST00000557782 RASA3Q14644 834 aa5.24□□□□□ -1.57
TDP1-217ENST00000557782 PLEKHG6Q3KR16 790 aa5.24□□□□□ -1.57
TDP1-217ENST00000557782 ARSHQ5FYA8 562 aa5.24□□□□□ -1.57
TDP1-217ENST00000557782 IER5Q5VY09 327 aa5.24□□□□□ -1.57
TDP1-217ENST00000557782 TMEM214Q6NUQ4 689 aaKnown RBP5.24□□□□□ -1.57
TDP1-217ENST00000557782 HNRNPLLQ8WVV9 542 aaKnown RBP5.24□□□□□ -1.57
TDP1-217ENST00000557782 APPBP2Q92624 585 aa5.24□□□□□ -1.57
TDP1-217ENST00000557782 NLRP3Q96P20 1036 aa5.24□□□□□ -1.57
TDP1-217ENST00000557782 HS3ST6Q96QI5 342 aa5.24□□□□□ -1.57
TDP1-217ENST00000557782 ZSCAN10Q96SZ4 725 aaPredicted RBP5.24□□□□□ -1.57
TDP1-217ENST00000557782 FHDC1Q9C0D6 1143 aaPredicted RBP5.24□□□□□ -1.57
TDP1-217ENST00000557782 SUV39H2Q9H5I1 410 aa5.24□□□□□ -1.57
TDP1-217ENST00000557782 GINM1Q9NU53 330 aa5.24□□□□□ -1.57
TDP1-217ENST00000557782 CHPF2Q9P2E5 772 aa5.24□□□□□ -1.57
TDP1-217ENST00000557782 ADAMTS1Q9UHI8 967 aa5.24□□□□□ -1.57
TDP1-217ENST00000557782 RIPOR2Q9Y4F9 1068 aa5.24□□□□□ -1.57
TDP1-217ENST00000557782 TLL2Q9Y6L7 1015 aa5.24□□□□□ -1.57
TDP1-217ENST00000557782 KLF4O43474 513 aa5.23□□□□□ -1.57
TDP1-217ENST00000557782 ST18O60284 1047 aa5.23□□□□□ -1.57
TDP1-217ENST00000557782 SOX9P48436 509 aa5.23□□□□□ -1.57
TDP1-217ENST00000557782 IDH3AP50213 366 aa5.23□□□□□ -1.57
TDP1-217ENST00000557782 ARSDP51689 593 aa5.23□□□□□ -1.57
TDP1-217ENST00000557782 IFRD2Q12894 506 aaPredicted RBP5.23□□□□□ -1.57
TDP1-217ENST00000557782 CCDC85BQ15834 202 aaPredicted RBP5.23□□□□□ -1.57
TDP1-217ENST00000557782 TNNI3KQ59H18 835 aa5.23□□□□□ -1.57
TDP1-217ENST00000557782 GORABQ5T7V8 394 aa5.23□□□□□ -1.57
TDP1-217ENST00000557782 GALNT12Q8IXK2 581 aa5.23□□□□□ -1.57
TDP1-217ENST00000557782 ZNF295-AS1Q8N0V1 137 aa5.23□□□□□ -1.57
TDP1-217ENST00000557782 RHBDD1Q8TEB9 315 aa5.23□□□□□ -1.57
TDP1-217ENST00000557782 IRF2BPLQ9H1B7 796 aa5.23□□□□□ -1.57
TDP1-217ENST00000557782 FANCLQ9NW38 375 aa5.23□□□□□ -1.57
TDP1-217ENST00000557782 PRKAG3Q9UGI9 489 aa5.23□□□□□ -1.57
TDP1-217ENST00000557782 TRAK1Q9UPV9 953 aa5.23□□□□□ -1.57
TDP1-217ENST00000557782 BCS1LQ9Y276 419 aa5.23□□□□□ -1.57
TDP1-217ENST00000557782 CCDC85CA6NKD9 419 aa5.22□□□□□ -1.57
TDP1-217ENST00000557782 MINDY4BA8MYZ0 360 aa5.22□□□□□ -1.57
TDP1-217ENST00000557782 UBAP1LF5GYI3 381 aa5.22□□□□□ -1.57
TDP1-217ENST00000557782 MEN1O00255 615 aa5.22□□□□□ -1.57
TDP1-217ENST00000557782 TPD52L2O43399 206 aaKnown RBP5.22□□□□□ -1.57
TDP1-217ENST00000557782 NBPF1Q3BBV0 1214 aa5.22□□□□□ -1.57
TDP1-217ENST00000557782 GNASQ5JWF2 1037 aa5.22□□□□□ -1.57
TDP1-217ENST00000557782 RC3H1Q5TC82 1133 aaKnown RBP5.22□□□□□ -1.57
TDP1-217ENST00000557782 HOMER1Q86YM7 354 aa5.22□□□□□ -1.57
TDP1-217ENST00000557782 CMTR1Q8N1G2 835 aaKnown RBP5.22□□□□□ -1.57
TDP1-217ENST00000557782 SH3TC2Q8TF17 1288 aa5.22□□□□□ -1.57
TDP1-217ENST00000557782 PMEPA1Q969W9 287 aa5.22□□□□□ -1.57
TDP1-217ENST00000557782 ANAPC16Q96DE5 110 aa5.22□□□□□ -1.57
TDP1-217ENST00000557782 EAF1Q96JC9 268 aaPredicted RBP5.22□□□□□ -1.57
TDP1-217ENST00000557782 CCDC136Q96JN2 1154 aa5.22□□□□□ -1.57
TDP1-217ENST00000557782 TMEM74Q96NL1 305 aa5.22□□□□□ -1.57
TDP1-217ENST00000557782 NT5C1AQ9BXI3 368 aa5.22□□□□□ -1.57
TDP1-217ENST00000557782 SRRTQ9BXP5 876 aaKnown RBP5.22□□□□□ -1.57
TDP1-217ENST00000557782 ELP3Q9H9T3 547 aa5.22□□□□□ -1.57
TDP1-217ENST00000557782 DDX56Q9NY93 547 aaKnown RBP5.22□□□□□ -1.57
TDP1-217ENST00000557782 PPM1HQ9ULR3 514 aa5.22□□□□□ -1.57
TDP1-217ENST00000557782 SUPT16HQ9Y5B9 1047 aaKnown RBP5.22□□□□□ -1.57
TDP1-217ENST00000557782 GPC6Q9Y625 555 aaPredicted RBP5.22□□□□□ -1.57
TDP1-217ENST00000557782 PPEF1O14829 653 aaPredicted RBP5.21□□□□□ -1.58
TDP1-217ENST00000557782 TXLNAP40222 546 aa5.21□□□□□ -1.58
TDP1-217ENST00000557782 RPIAP49247 311 aa5.21□□□□□ -1.58
TDP1-217ENST00000557782 ANKLE1Q8NAG6 615 aa5.21□□□□□ -1.58
TDP1-217ENST00000557782 TRPM4Q8TD43 1214 aa5.21□□□□□ -1.58
TDP1-217ENST00000557782 ZNF296Q8WUU4 475 aaPredicted RBP5.21□□□□□ -1.58
TDP1-217ENST00000557782 KCTD12Q96CX2 325 aaKnown RBP5.21□□□□□ -1.58
TDP1-217ENST00000557782 CCDC113Q9H0I3 377 aa5.21□□□□□ -1.58
TDP1-217ENST00000557782 TYW1Q9NV66 732 aaKnown RBP5.21□□□□□ -1.58
TDP1-217ENST00000557782 ANKIB1Q9P2G1 1089 aa5.21□□□□□ -1.58
TDP1-217ENST00000557782 MAGEC2Q9UBF1 373 aaPredicted RBP5.21□□□□□ -1.58
TDP1-217ENST00000557782 FAN1Q9Y2M0 1017 aa5.21□□□□□ -1.58
TDP1-217ENST00000557782 LOC102724159A0A0B4J2E5 919 aa5.2□□□□□ -1.58
TDP1-217ENST00000557782 FAM221BA6H8Z2 402 aa5.2□□□□□ -1.58
TDP1-217ENST00000557782 POLR3DP05423 398 aaPredicted RBP5.2□□□□□ -1.58
TDP1-217ENST00000557782 EPB42P16452 691 aa5.2□□□□□ -1.58
TDP1-217ENST00000557782 TATP17735 454 aaPredicted RBP5.2□□□□□ -1.58
TDP1-217ENST00000557782 GGCXP38435 758 aa5.2□□□□□ -1.58
TDP1-217ENST00000557782 PTGIRP43119 386 aa5.2□□□□□ -1.58
TDP1-217ENST00000557782 PLA2G4AP47712 749 aa5.2□□□□□ -1.58
TDP1-217ENST00000557782 CBLBQ13191 982 aa5.2□□□□□ -1.58
TDP1-217ENST00000557782 GRM2Q14416 872 aa5.2□□□□□ -1.58
TDP1-217ENST00000557782 PWP2Q15269 919 aaKnown RBP5.2□□□□□ -1.58
TDP1-217ENST00000557782 PCNX4Q63HM2 1172 aa5.2□□□□□ -1.58
TDP1-217ENST00000557782 RPUSD2Q8IZ73 545 aaKnown RBP5.2□□□□□ -1.58
TDP1-217ENST00000557782 PRPF38AQ8NAV1 312 aaKnown RBP5.2□□□□□ -1.58
TDP1-217ENST00000557782 ANKRD24Q8TF21 1146 aa5.2□□□□□ -1.58
TDP1-217ENST00000557782 SUSD3Q96L08 255 aa5.2□□□□□ -1.58
TDP1-217ENST00000557782 EHD4Q9H223 541 aa5.2□□□□□ -1.58
TDP1-217ENST00000557782 ZDHHC3Q9NYG2 299 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms