RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 ZPR1O75312 459 aa15.23■□□□□ 0.03
SHMT2-233ENST00000557529 REC8O95072 547 aa15.23■□□□□ 0.03
SHMT2-233ENST00000557529 SYNE4Q8N205 404 aa15.23■□□□□ 0.03
SHMT2-233ENST00000557529 CCDC8Q9H0W5 538 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-233ENST00000557529 BRWD3Q6RI45 1802 aa15.22■□□□□ 0.03
SHMT2-233ENST00000557529 SCN7AQ01118 1682 aa15.22■□□□□ 0.03
SHMT2-233ENST00000557529 NTSR2O95665 410 aa15.22■□□□□ 0.03
SHMT2-233ENST00000557529 CHMLP26374 656 aa15.22■□□□□ 0.03
SHMT2-233ENST00000557529 RXRBP28702 533 aa15.22■□□□□ 0.03
SHMT2-233ENST00000557529 ZNF594Q96JF6 807 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-233ENST00000557529 CEP126Q9P2H0 1117 aa15.22■□□□□ 0.03
SHMT2-233ENST00000557529 DAXXQ9UER7 740 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-233ENST00000557529 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-233ENST00000557529 TAF1LQ8IZX4 1826 aa15.21■□□□□ 0.03
SHMT2-233ENST00000557529 C4BP0C0L5 1744 aa15.21■□□□□ 0.03
SHMT2-233ENST00000557529 TRIM37O94972 964 aa15.21■□□□□ 0.02
SHMT2-233ENST00000557529 ADRA2BP18089 450 aa15.21■□□□□ 0.02
SHMT2-233ENST00000557529 ITGA6P23229 1130 aa15.21■□□□□ 0.02
SHMT2-233ENST00000557529 EVI5LQ96CN4 794 aa15.21■□□□□ 0.02
SHMT2-233ENST00000557529 GREM2Q9H772 168 aa15.21■□□□□ 0.02
SHMT2-233ENST00000557529 AKAP2Q9Y2D5 859 aa15.21■□□□□ 0.02
SHMT2-233ENST00000557529 ATP5JP18859 108 aa15.2■□□□□ 0.02
SHMT2-233ENST00000557529 BECN1Q14457 450 aa15.2■□□□□ 0.02
SHMT2-233ENST00000557529 LRRC24Q50LG9 513 aa15.2■□□□□ 0.02
SHMT2-233ENST00000557529 TRAPPC3LQ5T215 181 aa15.2■□□□□ 0.02
SHMT2-233ENST00000557529 USPL1Q5W0Q7 1092 aa15.2■□□□□ 0.02
SHMT2-233ENST00000557529 ESYT1Q9BSJ8 1104 aa15.2■□□□□ 0.02
SHMT2-233ENST00000557529 TLR7Q9NYK1 1049 aaKnown RBP15.2■□□□□ 0.02
SHMT2-233ENST00000557529 DBNLQ9UJU6 430 aaKnown RBP15.2■□□□□ 0.02
SHMT2-233ENST00000557529 MYH3P11055 1940 aa15.19■□□□□ 0.02
SHMT2-233ENST00000557529 RTL9Q8NET4 1388 aa15.19■□□□□ 0.02
SHMT2-233ENST00000557529 FAM177BA6PVY3 158 aa15.19■□□□□ 0.02
SHMT2-233ENST00000557529 MSH5O43196 834 aa15.19■□□□□ 0.02
SHMT2-233ENST00000557529 CCDC152Q4G0S7 254 aa15.19■□□□□ 0.02
SHMT2-233ENST00000557529 FBXO41Q8TF61 875 aa15.19■□□□□ 0.02
SHMT2-233ENST00000557529 ARHGEF1Q92888 912 aaKnown RBP15.19■□□□□ 0.02
SHMT2-233ENST00000557529 CCDC85AQ96PX6 553 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-233ENST00000557529 PUS3Q9BZE2 481 aaKnown RBP15.19■□□□□ 0.02
SHMT2-233ENST00000557529 NYXQ9GZU5 481 aa15.19■□□□□ 0.02
SHMT2-233ENST00000557529 ZNF609O15014 1411 aa15.18■□□□□ 0.02
SHMT2-233ENST00000557529 HIP1O00291 1037 aa15.18■□□□□ 0.02
SHMT2-233ENST00000557529 EPB41L2O43491 1005 aaKnown RBP15.18■□□□□ 0.02
SHMT2-233ENST00000557529 MAP4K4O95819 1239 aaPredicted RBP15.18■□□□□ 0.02
SHMT2-233ENST00000557529 HCLS1P14317 486 aaPredicted RBP15.18■□□□□ 0.02
SHMT2-233ENST00000557529 RFC4P35249 363 aa15.18■□□□□ 0.02
SHMT2-233ENST00000557529 LDHAL6AQ6ZMR3 332 aa15.18■□□□□ 0.02
SHMT2-233ENST00000557529 USP26Q9BXU7 913 aa15.18■□□□□ 0.02
SHMT2-233ENST00000557529 BCL2L12Q9HB09 334 aa15.18■□□□□ 0.02
SHMT2-233ENST00000557529 LRRC4BQ9NT99 713 aa15.18■□□□□ 0.02
SHMT2-233ENST00000557529 TBC1D9BQ66K14 1250 aa15.17■□□□□ 0.02
SHMT2-233ENST00000557529 RUFY2Q8WXA3 655 aa15.17■□□□□ 0.02
SHMT2-233ENST00000557529 SETDB2Q96T68 719 aa15.17■□□□□ 0.02
SHMT2-233ENST00000557529 DBNDD2Q9BQY9 259 aa15.17■□□□□ 0.02
SHMT2-233ENST00000557529 CNNM1Q9NRU3 951 aa15.17■□□□□ 0.02
SHMT2-233ENST00000557529 SRP68Q9UHB9 627 aaKnown RBP15.17■□□□□ 0.02
SHMT2-233ENST00000557529 RIPOR2Q9Y4F9 1068 aa15.17■□□□□ 0.02
SHMT2-233ENST00000557529 LAMB2P55268 1798 aa15.17■□□□□ 0.02
SHMT2-233ENST00000557529 SLC10A5Q5PT55 438 aa15.16■□□□□ 0.02
SHMT2-233ENST00000557529 ERICH6Q7L0X2 663 aa15.16■□□□□ 0.02
SHMT2-233ENST00000557529 NEUROD6Q96NK8 337 aa15.16■□□□□ 0.02
SHMT2-233ENST00000557529 BOLA2Q9H3K6 86 aa15.16■□□□□ 0.02
SHMT2-233ENST00000557529 DIAPH3Q9NSV4 1193 aa15.16■□□□□ 0.02
SHMT2-233ENST00000557529 A0A1B0GUL7 405 aa15.15■□□□□ 0.02
SHMT2-233ENST00000557529 PLSCR1O15162 318 aa15.15■□□□□ 0.02
SHMT2-233ENST00000557529 SSFA2P28290 1259 aa15.15■□□□□ 0.02
SHMT2-233ENST00000557529 GTF2E1P29083 439 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-233ENST00000557529 METTL24Q5JXM2 366 aa15.15■□□□□ 0.02
SHMT2-233ENST00000557529 BICDL1Q6ZP65 573 aa15.15■□□□□ 0.02
SHMT2-233ENST00000557529 TICAM2Q86XR7 235 aa15.15■□□□□ 0.02
SHMT2-233ENST00000557529 MROH5Q6ZUA9 1318 aa15.15■□□□□ 0.02
SHMT2-233ENST00000557529 LRP5O75197 1615 aa15.15■□□□□ 0.02
SHMT2-233ENST00000557529 AK9Q5TCS8 1911 aa15.15■□□□□ 0.02
SHMT2-233ENST00000557529 PHF14O94880 888 aa15.14■□□□□ 0.01
SHMT2-233ENST00000557529 MCCP23508 829 aa15.14■□□□□ 0.01
SHMT2-233ENST00000557529 TIMM10P62072 90 aa15.14■□□□□ 0.01
SHMT2-233ENST00000557529 SF3B3Q15393 1217 aaKnown RBP15.14■□□□□ 0.01
SHMT2-233ENST00000557529 TXNRD1Q16881 649 aa15.14■□□□□ 0.01
SHMT2-233ENST00000557529 ERFEQ4G0M1 354 aa15.14■□□□□ 0.01
SHMT2-233ENST00000557529 TPTE2Q6XPS3 522 aa15.14■□□□□ 0.01
SHMT2-233ENST00000557529 SMIM5Q71RC9 77 aa15.14■□□□□ 0.01
SHMT2-233ENST00000557529 NBPF5PQ86XG9 351 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-233ENST00000557529 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.14■□□□□ 0.01
SHMT2-233ENST00000557529 HAUS7Q99871 368 aa15.14■□□□□ 0.01
SHMT2-233ENST00000557529 RIC1Q4ADV7 1423 aa15.14■□□□□ 0.01
SHMT2-233ENST00000557529 DDX60Q8IY21 1712 aaKnown RBP15.14■□□□□ 0.01
SHMT2-233ENST00000557529 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.13■□□□□ 0.01
SHMT2-233ENST00000557529 SGSM2O43147 1006 aa15.13■□□□□ 0.01
SHMT2-233ENST00000557529 IGHMBP2P38935 993 aaKnown RBP15.13■□□□□ 0.01
SHMT2-233ENST00000557529 ATP2B3Q16720 1220 aa15.13■□□□□ 0.01
SHMT2-233ENST00000557529 COL24A1Q17RW2 1714 aa15.13■□□□□ 0.01
SHMT2-233ENST00000557529 RFX7Q2KHR2 1363 aa15.13■□□□□ 0.01
SHMT2-233ENST00000557529 CCDC158Q5M9N0 1113 aa15.13■□□□□ 0.01
SHMT2-233ENST00000557529 AMIGO3Q86WK7 504 aa15.13■□□□□ 0.01
SHMT2-233ENST00000557529 CDC5LQ99459 802 aaKnown RBP15.13■□□□□ 0.01
SHMT2-233ENST00000557529 MPHOSPH8Q99549 860 aa15.13■□□□□ 0.01
SHMT2-233ENST00000557529 ABCC12Q96J65 1359 aa15.12■□□□□ 0.01
SHMT2-233ENST00000557529 GORABQ5T7V8 394 aa15.12■□□□□ 0.01
SHMT2-233ENST00000557529 FSD1Q9BTV5 496 aa15.12■□□□□ 0.01
SHMT2-233ENST00000557529 ANO2Q9NQ90 1003 aa15.12■□□□□ 0.01
SHMT2-233ENST00000557529 C4AP0C0L4 1744 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms