RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-215	ENST00000557517	SNED1	Q8TER0	1413 aa		13.74	□□□□□ -0.21
PSMC6-215	ENST00000557517	FER1L6	Q2WGJ9	1857 aa		13.74	□□□□□ -0.21
PSMC6-215	ENST00000557517	FZD9	O00144	591 aa		13.74	□□□□□ -0.21
PSMC6-215	ENST00000557517	ISCA1	Q9BUE6	129 aa		13.74	□□□□□ -0.21
PSMC6-215	ENST00000557517	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.74	□□□□□ -0.21
PSMC6-215	ENST00000557517	BBOX1	O75936	387 aa		13.73	□□□□□ -0.21
PSMC6-215	ENST00000557517	IARS	P41252	1262 aa	Known RBP	13.73	□□□□□ -0.21
PSMC6-215	ENST00000557517	C8orf58	Q8NAV2	365 aa		13.73	□□□□□ -0.21
PSMC6-215	ENST00000557517	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.73	□□□□□ -0.21
PSMC6-215	ENST00000557517	TRMT112	Q9UI30	125 aa	Known RBP	13.73	□□□□□ -0.21
PSMC6-215	ENST00000557517	CHMP4A	Q9BY43	222 aa		13.72	□□□□□ -0.21
PSMC6-215	ENST00000557517	VPS33B	Q9H267	617 aa		13.72	□□□□□ -0.21
PSMC6-215	ENST00000557517	PRDM10	Q9NQV6	1147 aa		13.72	□□□□□ -0.21
PSMC6-215	ENST00000557517	ATP6V0A2	Q9Y487	856 aa		13.72	□□□□□ -0.21
PSMC6-215	ENST00000557517	LAMB4	A4D0S4	1761 aa		13.72	□□□□□ -0.21
PSMC6-215	ENST00000557517	SLX4	Q8IY92	1834 aa		13.71	□□□□□ -0.21
PSMC6-215	ENST00000557517	SH3TC1	Q8TE82	1336 aa		13.71	□□□□□ -0.21
PSMC6-215	ENST00000557517	COL11A2	P13942	1736 aa	Predicted RBP	13.71	□□□□□ -0.21
PSMC6-215	ENST00000557517	ELL2	O00472	640 aa	Predicted RBP	13.71	□□□□□ -0.21
PSMC6-215	ENST00000557517	FOXN1	O15353	648 aa		13.71	□□□□□ -0.21
PSMC6-215	ENST00000557517	HCLS1	P14317	486 aa	Predicted RBP	13.71	□□□□□ -0.21
PSMC6-215	ENST00000557517	WWC1	Q8IX03	1113 aa		13.71	□□□□□ -0.21
PSMC6-215	ENST00000557517	CNTNAP1	P78357	1384 aa		13.71	□□□□□ -0.22
PSMC6-215	ENST00000557517	IQCA1L	A6NCM1	817 aa		13.7	□□□□□ -0.22
PSMC6-215	ENST00000557517	PPEF1	O14829	653 aa	Predicted RBP	13.7	□□□□□ -0.22
PSMC6-215	ENST00000557517	SF3B3	Q15393	1217 aa	Known RBP	13.7	□□□□□ -0.22
PSMC6-215	ENST00000557517	SP8	Q8IXZ3	490 aa		13.7	□□□□□ -0.22
PSMC6-215	ENST00000557517	JDP2	Q8WYK2	163 aa		13.7	□□□□□ -0.22
PSMC6-215	ENST00000557517	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.7	□□□□□ -0.22
PSMC6-215	ENST00000557517	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.7	□□□□□ -0.22
PSMC6-215	ENST00000557517	PHAX	Q9H814	394 aa	Known RBP	13.7	□□□□□ -0.22
PSMC6-215	ENST00000557517	MKRN1	Q9UHC7	482 aa	Known RBP	13.7	□□□□□ -0.22
PSMC6-215	ENST00000557517	ATP5J2-PTCD1	G3V325	749 aa		13.69	□□□□□ -0.22
PSMC6-215	ENST00000557517	ANP32C	O43423	234 aa		13.69	□□□□□ -0.22
PSMC6-215	ENST00000557517	GPC2	Q8N158	579 aa		13.69	□□□□□ -0.22
PSMC6-215	ENST00000557517	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.69	□□□□□ -0.22
PSMC6-215	ENST00000557517	ABCC4	O15439	1325 aa		13.68	□□□□□ -0.22
PSMC6-215	ENST00000557517	CCDC30	Q5VVM6	783 aa		13.68	□□□□□ -0.22
PSMC6-215	ENST00000557517	RIC3	Q7Z5B4	369 aa		13.68	□□□□□ -0.22
PSMC6-215	ENST00000557517	TSPYL6	Q8N831	410 aa		13.68	□□□□□ -0.22
PSMC6-215	ENST00000557517	FAM89A	Q96GI7	184 aa		13.68	□□□□□ -0.22
PSMC6-215	ENST00000557517	MS4A3	Q96HJ5	214 aa		13.68	□□□□□ -0.22
PSMC6-215	ENST00000557517	TMX4	Q9H1E5	349 aa	Predicted RBP	13.68	□□□□□ -0.22
PSMC6-215	ENST00000557517	IL16	Q14005	1332 aa		13.67	□□□□□ -0.22
PSMC6-215	ENST00000557517	PASK	Q96RG2	1323 aa		13.67	□□□□□ -0.22
PSMC6-215	ENST00000557517	ZNF541	Q9H0D2	1346 aa		13.67	□□□□□ -0.22
PSMC6-215	ENST00000557517	SCN4A	P35499	1836 aa		13.67	□□□□□ -0.22
PSMC6-215	ENST00000557517	TCERG1	O14776	1098 aa	Known RBP	13.67	□□□□□ -0.22
PSMC6-215	ENST00000557517	POTEJ	P0CG39	1038 aa		13.67	□□□□□ -0.22
PSMC6-215	ENST00000557517	DDX46	Q7L014	1031 aa	Known RBP	13.67	□□□□□ -0.22
PSMC6-215	ENST00000557517	SLC51A	Q86UW1	340 aa		13.67	□□□□□ -0.22
PSMC6-215	ENST00000557517	MRS2	Q9HD23	443 aa		13.67	□□□□□ -0.22
PSMC6-215	ENST00000557517	ARFGEF2	Q9Y6D5	1785 aa		13.66	□□□□□ -0.22
PSMC6-215	ENST00000557517	CTCF	P49711	727 aa	Predicted RBP	13.66	□□□□□ -0.22
PSMC6-215	ENST00000557517	GRAP	Q13588	217 aa		13.66	□□□□□ -0.22
PSMC6-215	ENST00000557517	TMC4	Q7Z404	712 aa		13.66	□□□□□ -0.22
PSMC6-215	ENST00000557517	LARGE2	Q8N3Y3	721 aa		13.66	□□□□□ -0.22
PSMC6-215	ENST00000557517	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.66	□□□□□ -0.22
PSMC6-215	ENST00000557517	GRAPL	Q8TC17	118 aa	Predicted RBP	13.66	□□□□□ -0.22
PSMC6-215	ENST00000557517	HACL1	Q9UJ83	578 aa		13.66	□□□□□ -0.22
PSMC6-215	ENST00000557517	EIF6	P56537	245 aa	Known RBP	13.65	□□□□□ -0.22
PSMC6-215	ENST00000557517	GOLGA2	Q08379	1002 aa		13.65	□□□□□ -0.22
PSMC6-215	ENST00000557517	PNMA8A	Q86V59	439 aa	Predicted RBP	13.65	□□□□□ -0.22
PSMC6-215	ENST00000557517	LDHD	Q86WU2	507 aa		13.65	□□□□□ -0.22
PSMC6-215	ENST00000557517	WDR63	Q8IWG1	891 aa		13.65	□□□□□ -0.22
PSMC6-215	ENST00000557517	MPND	Q8N594	471 aa		13.65	□□□□□ -0.22
PSMC6-215	ENST00000557517	CCDC191	Q8NCU4	936 aa		13.65	□□□□□ -0.22
PSMC6-215	ENST00000557517	SUPT20H	Q8NEM7	779 aa		13.65	□□□□□ -0.22
PSMC6-215	ENST00000557517	TSR2	Q969E8	191 aa	Known RBP	13.65	□□□□□ -0.22
PSMC6-215	ENST00000557517	METTL22	Q9BUU2	404 aa	Predicted RBP	13.65	□□□□□ -0.22
PSMC6-215	ENST00000557517	NUP98	P52948	1817 aa		13.64	□□□□□ -0.23
PSMC6-215	ENST00000557517	ADAMTSL1	Q8N6G6	1762 aa		13.64	□□□□□ -0.23
PSMC6-215	ENST00000557517	IRS4	O14654	1257 aa	Predicted RBP	13.64	□□□□□ -0.23
PSMC6-215	ENST00000557517	DDX58	O95786	925 aa	Known RBP	13.64	□□□□□ -0.23
PSMC6-215	ENST00000557517	ITGBL1	O95965	494 aa	Predicted RBP	13.64	□□□□□ -0.23
PSMC6-215	ENST00000557517	EPHX2	P34913	555 aa		13.64	□□□□□ -0.23
PSMC6-215	ENST00000557517	DPP8	Q6V1X1	898 aa	Predicted RBP	13.64	□□□□□ -0.23
PSMC6-215	ENST00000557517	KSR2	Q6VAB6	950 aa		13.64	□□□□□ -0.23
PSMC6-215	ENST00000557517	MIER1	Q8N108	512 aa		13.64	□□□□□ -0.23
PSMC6-215	ENST00000557517	ZNF428	Q96B54	188 aa		13.64	□□□□□ -0.23
PSMC6-215	ENST00000557517	WBP1L	Q9NX94	342 aa		13.64	□□□□□ -0.23
PSMC6-215	ENST00000557517	PPIP5K2	O43314	1243 aa		13.63	□□□□□ -0.23
PSMC6-215	ENST00000557517	PCCA	P05165	728 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMC6-215	ENST00000557517	HSP90B1	P14625	803 aa	Known RBP	13.63	□□□□□ -0.23
PSMC6-215	ENST00000557517	VEGFB	P49765	207 aa		13.63	□□□□□ -0.23
PSMC6-215	ENST00000557517	KIAA2012	Q0VF49	1180 aa		13.63	□□□□□ -0.23
PSMC6-215	ENST00000557517	TWISTNB	Q3B726	338 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMC6-215	ENST00000557517	CELF1	Q92879	486 aa	Known RBP	13.63	□□□□□ -0.23
PSMC6-215	ENST00000557517	AIDA	Q96BJ3	306 aa		13.63	□□□□□ -0.23
PSMC6-215	ENST00000557517	MYD88	Q99836	296 aa		13.63	□□□□□ -0.23
PSMC6-215	ENST00000557517	ZNRF3	Q9ULT6	936 aa		13.63	□□□□□ -0.23
PSMC6-215	ENST00000557517	CACNA1S	Q13698	1873 aa		13.63	□□□□□ -0.23
PSMC6-215	ENST00000557517	PI4KAP2	A4QPH2	592 aa		13.62	□□□□□ -0.23
PSMC6-215	ENST00000557517	SCNN1D	P51172	638 aa		13.62	□□□□□ -0.23
PSMC6-215	ENST00000557517	RPS8	P62241	208 aa	Known RBP	13.62	□□□□□ -0.23
PSMC6-215	ENST00000557517	CXCL9	Q07325	125 aa		13.62	□□□□□ -0.23
PSMC6-215	ENST00000557517	AOC3	Q16853	763 aa		13.62	□□□□□ -0.23
PSMC6-215	ENST00000557517	RTL5	Q5HYW3	569 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMC6-215	ENST00000557517	NIM1K	Q8IY84	436 aa		13.62	□□□□□ -0.23
PSMC6-215	ENST00000557517	PI4KAP1	Q8N8J0	262 aa		13.62	□□□□□ -0.23

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