RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 RPS6KB1P23443 525 aa21.13■□□□□ 0.97
XRCC3-218ENST00000557439 C17orf53Q8N3J3 647 aaPredicted RBP21.13■□□□□ 0.97
XRCC3-218ENST00000557439 HIP1O00291 1037 aa21.12■□□□□ 0.97
XRCC3-218ENST00000557439 SNRPA1P09661 255 aaKnown RBP21.12■□□□□ 0.97
XRCC3-218ENST00000557439 C19orf44Q9H6X5 657 aa21.12■□□□□ 0.97
XRCC3-218ENST00000557439 ATP6V1DQ9Y5K8 247 aa21.12■□□□□ 0.97
XRCC3-218ENST00000557439 ADCY5O95622 1261 aa21.12■□□□□ 0.97
XRCC3-218ENST00000557439 HSP90AA2PQ14568 343 aaPredicted RBP21.12■□□□□ 0.97
XRCC3-218ENST00000557439 CAMK4Q16566 473 aa21.12■□□□□ 0.97
XRCC3-218ENST00000557439 ADAMTS7Q9UKP4 1686 aa21.12■□□□□ 0.97
XRCC3-218ENST00000557439 JAK2O60674 1132 aa21.11■□□□□ 0.97
XRCC3-218ENST00000557439 RBM10P98175 930 aaKnown RBP21.11■□□□□ 0.97
XRCC3-218ENST00000557439 AP5Z1O43299 807 aa21.11■□□□□ 0.97
XRCC3-218ENST00000557439 PPFIA3O75145 1194 aa21.11■□□□□ 0.97
XRCC3-218ENST00000557439 PSMA5P28066 241 aa21.11■□□□□ 0.97
XRCC3-218ENST00000557439 TTC12Q9H892 705 aaPredicted RBP21.11■□□□□ 0.97
XRCC3-218ENST00000557439 COPRSQ9NQ92 184 aa21.11■□□□□ 0.97
XRCC3-218ENST00000557439 LMBR1LQ6UX01 489 aa21.1■□□□□ 0.97
XRCC3-218ENST00000557439 LIG1P18858 919 aa21.1■□□□□ 0.97
XRCC3-218ENST00000557439 DDX11Q96FC9 970 aa21.1■□□□□ 0.97
XRCC3-218ENST00000557439 FOSBP53539 338 aa21.09■□□□□ 0.97
XRCC3-218ENST00000557439 RNF20Q5VTR2 975 aa21.09■□□□□ 0.97
XRCC3-218ENST00000557439 FUCA2Q9BTY2 467 aa21.09■□□□□ 0.97
XRCC3-218ENST00000557439 SNRKQ9NRH2 765 aa21.09■□□□□ 0.97
XRCC3-218ENST00000557439 ZNF609O15014 1411 aa21.09■□□□□ 0.97
XRCC3-218ENST00000557439 A0A0G2JLW4 131 aa21.09■□□□□ 0.97
XRCC3-218ENST00000557439 CABP4P57796 275 aa21.09■□□□□ 0.97
XRCC3-218ENST00000557439 AFDNP55196 1824 aaKnown RBP21.09■□□□□ 0.97
XRCC3-218ENST00000557439 TPM2P07951 284 aa21.08■□□□□ 0.97
XRCC3-218ENST00000557439 TTLL7Q6ZT98 887 aa21.08■□□□□ 0.97
XRCC3-218ENST00000557439 FMNL2Q96PY5 1086 aa21.08■□□□□ 0.97
XRCC3-218ENST00000557439 ATP5JP18859 108 aa21.08■□□□□ 0.96
XRCC3-218ENST00000557439 NEUROD6Q96NK8 337 aa21.08■□□□□ 0.96
XRCC3-218ENST00000557439 NBPF26B4DH59 902 aa21.07■□□□□ 0.96
XRCC3-218ENST00000557439 ATF3P18847 181 aa21.07■□□□□ 0.96
XRCC3-218ENST00000557439 NBPF14Q5TI25 921 aa21.07■□□□□ 0.96
XRCC3-218ENST00000557439 NBPF10Q6P3W6 841 aaKnown RBP21.07■□□□□ 0.96
XRCC3-218ENST00000557439 NBPF15Q8N660 670 aa21.07■□□□□ 0.96
XRCC3-218ENST00000557439 DCAF5Q96JK2 942 aa21.07■□□□□ 0.96
XRCC3-218ENST00000557439 ALS2Q96Q42 1657 aa21.07■□□□□ 0.96
XRCC3-218ENST00000557439 TIMM10P62072 90 aa21.07■□□□□ 0.96
XRCC3-218ENST00000557439 CYP21A2P08686 494 aa21.06■□□□□ 0.96
XRCC3-218ENST00000557439 ZNF594Q96JF6 807 aaPredicted RBP21.06■□□□□ 0.96
XRCC3-218ENST00000557439 CKAP2LQ8IYA6 745 aa21.06■□□□□ 0.96
XRCC3-218ENST00000557439 FAM184AQ8NB25 1140 aa21.06■□□□□ 0.96
XRCC3-218ENST00000557439 CASP7P55210 303 aa21.05■□□□□ 0.96
XRCC3-218ENST00000557439 Q6ZUG5 572 aa21.05■□□□□ 0.96
XRCC3-218ENST00000557439 MRC1P22897 1456 aa21.05■□□□□ 0.96
XRCC3-218ENST00000557439 HSP90B1P14625 803 aaKnown RBP21.05■□□□□ 0.96
XRCC3-218ENST00000557439 KRT85P78386 507 aa21.05■□□□□ 0.96
XRCC3-218ENST00000557439 RABL6Q3YEC7 729 aaPredicted RBP21.05■□□□□ 0.96
XRCC3-218ENST00000557439 NEK1Q96PY6 1258 aa21.05■□□□□ 0.96
XRCC3-218ENST00000557439 GOLIM4O00461 696 aa21.04■□□□□ 0.96
XRCC3-218ENST00000557439 A1BGP04217 495 aa21.04■□□□□ 0.96
XRCC3-218ENST00000557439 STOX1Q6ZVD7 989 aa21.04■□□□□ 0.96
XRCC3-218ENST00000557439 ZBTB3Q9H5J0 574 aa21.04■□□□□ 0.96
XRCC3-218ENST00000557439 TMEM94Q12767 1356 aa21.04■□□□□ 0.96
XRCC3-218ENST00000557439 UQCRHLA0A096LP55 91 aa21.04■□□□□ 0.96
XRCC3-218ENST00000557439 UQCRHP07919 91 aa21.04■□□□□ 0.96
XRCC3-218ENST00000557439 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.03■□□□□ 0.96
XRCC3-218ENST00000557439 KDM4AO75164 1064 aa21.03■□□□□ 0.96
XRCC3-218ENST00000557439 UVSSAQ2YD98 709 aa21.03■□□□□ 0.96
XRCC3-218ENST00000557439 SPC24Q8NBT2 197 aa21.03■□□□□ 0.96
XRCC3-218ENST00000557439 JCADQ9P266 1359 aa21.03■□□□□ 0.96
XRCC3-218ENST00000557439 ARFGEF2Q9Y6D5 1785 aa21.03■□□□□ 0.96
XRCC3-218ENST00000557439 LETM1O95202 739 aaPredicted RBP21.03■□□□□ 0.96
XRCC3-218ENST00000557439 FOXO4P98177 505 aa21.03■□□□□ 0.96
XRCC3-218ENST00000557439 BRF1Q92994 677 aa21.03■□□□□ 0.96
XRCC3-218ENST00000557439 MST1RQ04912 1400 aa21.03■□□□□ 0.96
XRCC3-218ENST00000557439 MCM5P33992 734 aa21.02■□□□□ 0.96
XRCC3-218ENST00000557439 CEBPZQ03701 1054 aaKnown RBP21.02■□□□□ 0.96
XRCC3-218ENST00000557439 LRRC24Q50LG9 513 aa21.02■□□□□ 0.96
XRCC3-218ENST00000557439 USPL1Q5W0Q7 1092 aa21.02■□□□□ 0.96
XRCC3-218ENST00000557439 ADAMTSL3P82987 1691 aa21.02■□□□□ 0.96
XRCC3-218ENST00000557439 KIAA2012Q0VF49 1180 aa21.02■□□□□ 0.96
XRCC3-218ENST00000557439 ANKRD1Q15327 319 aa21.02■□□□□ 0.96
XRCC3-218ENST00000557439 CSPP1Q1MSJ5 1256 aa21.02■□□□□ 0.96
XRCC3-218ENST00000557439 HAUS7Q99871 368 aa21.02■□□□□ 0.96
XRCC3-218ENST00000557439 DACT1Q9NYF0 836 aa21.02■□□□□ 0.96
XRCC3-218ENST00000557439 COL18A1P39060 1754 aa21.02■□□□□ 0.95
XRCC3-218ENST00000557439 CHST3Q7LGC8 479 aa21.01■□□□□ 0.95
XRCC3-218ENST00000557439 ATG9AQ7Z3C6 839 aa21.01■□□□□ 0.95
XRCC3-218ENST00000557439 PLBD2Q8NHP8 589 aa21.01■□□□□ 0.95
XRCC3-218ENST00000557439 SPATA32Q96LK8 384 aa21.01■□□□□ 0.95
XRCC3-218ENST00000557439 CCDC85AQ96PX6 553 aaPredicted RBP21.01■□□□□ 0.95
XRCC3-218ENST00000557439 FAM13BQ9NYF5 915 aa21.01■□□□□ 0.95
XRCC3-218ENST00000557439 HMG20BQ9P0W2 317 aa21.01■□□□□ 0.95
XRCC3-218ENST00000557439 RRP9O43818 475 aaKnown RBP21.01■□□□□ 0.95
XRCC3-218ENST00000557439 MCMDC2Q4G0Z9 681 aa21.01■□□□□ 0.95
XRCC3-218ENST00000557439 ZNF330Q9Y3S2 320 aaPredicted RBP21.01■□□□□ 0.95
XRCC3-218ENST00000557439 GTF3C6Q969F1 213 aa21■□□□□ 0.95
XRCC3-218ENST00000557439 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21■□□□□ 0.95
XRCC3-218ENST00000557439 KIF1AQ12756 1690 aa21■□□□□ 0.95
XRCC3-218ENST00000557439 FGD1P98174 961 aa21■□□□□ 0.95
XRCC3-218ENST00000557439 DNTTIP2Q5QJE6 756 aaKnown RBP21■□□□□ 0.95
XRCC3-218ENST00000557439 PUS3Q9BZE2 481 aaKnown RBP21■□□□□ 0.95
XRCC3-218ENST00000557439 PDCP20941 246 aa20.99■□□□□ 0.95
XRCC3-218ENST00000557439 SCRN1Q12765 414 aa20.99■□□□□ 0.95
XRCC3-218ENST00000557439 TSGA10IPQ3SY00 556 aa20.99■□□□□ 0.95
XRCC3-218ENST00000557439 LUZP1Q86V48 1076 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms