RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 SLC4A2P04920 1241 aa26.96■■□□□ 1.91
FOXA1-205ENST00000557418 HSP90B1P14625 803 aaKnown RBP26.96■■□□□ 1.91
FOXA1-205ENST00000557418 SF3B3Q15393 1217 aaKnown RBP26.96■■□□□ 1.91
FOXA1-205ENST00000557418 MAP3K2Q9Y2U5 619 aa26.96■■□□□ 1.91
FOXA1-205ENST00000557418 SNED1Q8TER0 1413 aa26.96■■□□□ 1.91
FOXA1-205ENST00000557418 FZD9O00144 591 aa26.95■■□□□ 1.9
FOXA1-205ENST00000557418 LARGE2Q8N3Y3 721 aa26.95■■□□□ 1.9
FOXA1-205ENST00000557418 PI4KAP2A4QPH2 592 aa26.94■■□□□ 1.9
FOXA1-205ENST00000557418 SLC51AQ86UW1 340 aa26.94■■□□□ 1.9
FOXA1-205ENST00000557418 PI4KAP1Q8N8J0 262 aa26.94■■□□□ 1.9
FOXA1-205ENST00000557418 CWC25Q9NXE8 425 aaPredicted RBP26.94■■□□□ 1.9
FOXA1-205ENST00000557418 IQCA1LA6NCM1 817 aa26.93■■□□□ 1.9
FOXA1-205ENST00000557418 EIF6P56537 245 aaKnown RBP26.93■■□□□ 1.9
FOXA1-205ENST00000557418 TMC4Q7Z404 712 aa26.93■■□□□ 1.9
FOXA1-205ENST00000557418 MPNDQ8N594 471 aa26.93■■□□□ 1.9
FOXA1-205ENST00000557418 SUPT20HQ8NEM7 779 aa26.93■■□□□ 1.9
FOXA1-205ENST00000557418 ZNF541Q9H0D2 1346 aa26.92■■□□□ 1.9
FOXA1-205ENST00000557418 TAF1P21675 1872 aa26.92■■□□□ 1.9
FOXA1-205ENST00000557418 VAMP4O75379 141 aa26.92■■□□□ 1.9
FOXA1-205ENST00000557418 DPP8Q6V1X1 898 aaPredicted RBP26.92■■□□□ 1.9
FOXA1-205ENST00000557418 G2E3Q7L622 706 aa26.92■■□□□ 1.9
FOXA1-205ENST00000557418 VPS33BQ9H267 617 aa26.92■■□□□ 1.9
FOXA1-205ENST00000557418 DDX60Q8IY21 1712 aaKnown RBP26.91■■□□□ 1.9
FOXA1-205ENST00000557418 PCCAP05165 728 aaPredicted RBP26.91■■□□□ 1.9
FOXA1-205ENST00000557418 NEXNQ0ZGT2 675 aa26.91■■□□□ 1.9
FOXA1-205ENST00000557418 L3MBTL3Q96JM7 780 aaPredicted RBP26.91■■□□□ 1.9
FOXA1-205ENST00000557418 PPIP5K2O43314 1243 aa26.9■■□□□ 1.9
FOXA1-205ENST00000557418 JARID2Q92833 1246 aaPredicted RBP26.9■■□□□ 1.9
FOXA1-205ENST00000557418 NIM1KQ8IY84 436 aa26.89■■□□□ 1.9
FOXA1-205ENST00000557418 GPC2Q8N158 579 aa26.89■■□□□ 1.9
FOXA1-205ENST00000557418 RTFDC1Q9BY42 306 aaPredicted RBP26.89■■□□□ 1.9
FOXA1-205ENST00000557418 CACNA1FO60840 1977 aa26.88■■□□□ 1.89
FOXA1-205ENST00000557418 CELF1Q92879 486 aaKnown RBP26.88■■□□□ 1.89
FOXA1-205ENST00000557418 GJA3Q9Y6H8 435 aa26.88■■□□□ 1.89
FOXA1-205ENST00000557418 PDE8AO60658 829 aa26.87■■□□□ 1.89
FOXA1-205ENST00000557418 CT47B1P0C2W7 299 aaPredicted RBP26.87■■□□□ 1.89
FOXA1-205ENST00000557418 RPS8P62241 208 aaKnown RBP26.87■■□□□ 1.89
FOXA1-205ENST00000557418 AOC3Q16853 763 aa26.87■■□□□ 1.89
FOXA1-205ENST00000557418 TAF1DQ9H5J8 278 aaPredicted RBP26.87■■□□□ 1.89
FOXA1-205ENST00000557418 HACL1Q9UJ83 578 aa26.87■■□□□ 1.89
FOXA1-205ENST00000557418 SCN4AP35499 1836 aa26.87■■□□□ 1.89
FOXA1-205ENST00000557418 IGKV5-2P06315 115 aa26.86■■□□□ 1.89
FOXA1-205ENST00000557418 FLIIQ13045 1269 aa26.86■■□□□ 1.89
FOXA1-205ENST00000557418 CEP350Q5VT06 3117 aa26.85■■□□□ 1.89
FOXA1-205ENST00000557418 FKBP5Q13451 457 aaPredicted RBP26.85■■□□□ 1.89
FOXA1-205ENST00000557418 CCDC152Q4G0S7 254 aa26.85■■□□□ 1.89
FOXA1-205ENST00000557418 CHADLQ6NUI6 762 aa26.85■■□□□ 1.89
FOXA1-205ENST00000557418 NSFL1CQ9UNZ2 370 aaKnown RBP26.85■■□□□ 1.89
FOXA1-205ENST00000557418 CWF19L2Q2TBE0 894 aaKnown RBP26.83■■□□□ 1.89
FOXA1-205ENST00000557418 ZNRF3Q9ULT6 936 aa26.83■■□□□ 1.89
FOXA1-205ENST00000557418 COL4A5P29400 1685 aa26.82■■□□□ 1.88
FOXA1-205ENST00000557418 NEURL1BA8MQ27 555 aa26.82■■□□□ 1.88
FOXA1-205ENST00000557418 POTEIP0CG38 1075 aa26.82■■□□□ 1.88
FOXA1-205ENST00000557418 POTEJP0CG39 1038 aa26.82■■□□□ 1.88
FOXA1-205ENST00000557418 EPHX2P34913 555 aa26.82■■□□□ 1.88
FOXA1-205ENST00000557418 HTRA3P83110 453 aa26.82■■□□□ 1.88
FOXA1-205ENST00000557418 EAPPQ56P03 285 aaPredicted RBP26.82■■□□□ 1.88
FOXA1-205ENST00000557418 DNAJC5GQ8N7S2 189 aa26.82■■□□□ 1.88
FOXA1-205ENST00000557418 SEC31BQ9NQW1 1179 aa26.82■■□□□ 1.88
FOXA1-205ENST00000557418 CDHR2Q9BYE9 1310 aa26.82■■□□□ 1.88
FOXA1-205ENST00000557418 KIAA2012Q0VF49 1180 aa26.81■■□□□ 1.88
FOXA1-205ENST00000557418 LDHDQ86WU2 507 aa26.81■■□□□ 1.88
FOXA1-205ENST00000557418 DNAAF4Q8WXU2 420 aa26.81■■□□□ 1.88
FOXA1-205ENST00000557418 CCDC85AQ96PX6 553 aaPredicted RBP26.81■■□□□ 1.88
FOXA1-205ENST00000557418 CLEC11AQ9Y240 323 aa26.81■■□□□ 1.88
FOXA1-205ENST00000557418 LMOD1P29536 600 aaPredicted RBP26.8■■□□□ 1.88
FOXA1-205ENST00000557418 PNMA8AQ86V59 439 aaPredicted RBP26.8■■□□□ 1.88
FOXA1-205ENST00000557418 C6orf229H3BNL8 230 aa26.79■■□□□ 1.88
FOXA1-205ENST00000557418 GPSM2P81274 684 aa26.79■■□□□ 1.88
FOXA1-205ENST00000557418 H7C1W4 665 aa26.78■■□□□ 1.88
FOXA1-205ENST00000557418 RARSP54136 660 aaKnown RBP26.78■■□□□ 1.88
FOXA1-205ENST00000557418 CXCL9Q07325 125 aa26.78■■□□□ 1.88
FOXA1-205ENST00000557418 WASHC4Q2M389 1173 aa26.78■■□□□ 1.88
FOXA1-205ENST00000557418 GCKRQ14397 625 aa26.77■■□□□ 1.88
FOXA1-205ENST00000557418 LINS1Q8NG48 757 aa26.77■■□□□ 1.88
FOXA1-205ENST00000557418 SSH1Q8WYL5 1049 aa26.77■■□□□ 1.88
FOXA1-205ENST00000557418 CTSWP56202 376 aa26.76■■□□□ 1.87
FOXA1-205ENST00000557418 ALDH1L2Q3SY69 923 aa26.76■■□□□ 1.87
FOXA1-205ENST00000557418 UBE3BQ7Z3V4 1068 aa26.76■■□□□ 1.87
FOXA1-205ENST00000557418 ANKRD18AQ8IVF6 992 aa26.76■■□□□ 1.87
FOXA1-205ENST00000557418 TTLL11Q8NHH1 800 aa26.76■■□□□ 1.87
FOXA1-205ENST00000557418 POLLQ9UGP5 575 aa26.76■■□□□ 1.87
FOXA1-205ENST00000557418 RIMBP2O15034 1052 aa26.75■■□□□ 1.87
FOXA1-205ENST00000557418 TNIP1Q15025 636 aa26.75■■□□□ 1.87
FOXA1-205ENST00000557418 CIAPIN1Q6FI81 312 aa26.75■■□□□ 1.87
FOXA1-205ENST00000557418 EYA3Q99504 573 aa26.75■■□□□ 1.87
FOXA1-205ENST00000557418 LRRC37AA6NMS7 1700 aa26.74■■□□□ 1.87
FOXA1-205ENST00000557418 EPS15P42566 896 aa26.74■■□□□ 1.87
FOXA1-205ENST00000557418 SCNN1DP51172 638 aa26.74■■□□□ 1.87
FOXA1-205ENST00000557418 ANKIB1Q9P2G1 1089 aa26.74■■□□□ 1.87
FOXA1-205ENST00000557418 RAD17O75943 681 aa26.73■■□□□ 1.87
FOXA1-205ENST00000557418 MRPL50Q8N5N7 158 aaKnown RBP26.73■■□□□ 1.87
FOXA1-205ENST00000557418 TBC1D16Q8TBP0 767 aa26.73■■□□□ 1.87
FOXA1-205ENST00000557418 KLRG1Q96E93 195 aa26.73■■□□□ 1.87
FOXA1-205ENST00000557418 CDC5LQ99459 802 aaKnown RBP26.73■■□□□ 1.87
FOXA1-205ENST00000557418 PODXL2Q9NZ53 605 aa26.73■■□□□ 1.87
FOXA1-205ENST00000557418 F6X3S4 739 aa26.72■■□□□ 1.87
FOXA1-205ENST00000557418 BRPF1P55201 1214 aaPredicted RBP26.72■■□□□ 1.87
FOXA1-205ENST00000557418 ZC3H12CQ9C0D7 883 aaKnown RBP26.72■■□□□ 1.87
FOXA1-205ENST00000557418 RCAN3Q9UKA8 241 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms