RNA–Protein interactions for RNA: ENST00000557295.1

LINC00640-204, long intergenic non-protein coding RNA 640, humanhuman

TSL 5 BASIC

Gene LINC00640, Length 708 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-204ENST00000557295 NLRP2Q9NX02 1062 aa9.71□□□□□ -0.86
LINC00640-204ENST00000557295 TTC21AQ8NDW8 1320 aa9.71□□□□□ -0.86
LINC00640-204ENST00000557295 ZBTB24O43167 697 aaPredicted RBP9.7□□□□□ -0.86
LINC00640-204ENST00000557295 FBXO45P0C2W1 286 aa9.7□□□□□ -0.86
LINC00640-204ENST00000557295 GGCXP38435 758 aa9.7□□□□□ -0.86
LINC00640-204ENST00000557295 NBPF1Q3BBV0 1214 aa9.7□□□□□ -0.86
LINC00640-204ENST00000557295 IRX2Q9BZI1 471 aaPredicted RBP9.7□□□□□ -0.86
LINC00640-204ENST00000557295 UNC93B1Q9H1C4 597 aa9.7□□□□□ -0.86
LINC00640-204ENST00000557295 ALG2Q9H553 416 aa9.7□□□□□ -0.86
LINC00640-204ENST00000557295 NFAT5O94916 1531 aa9.7□□□□□ -0.86
LINC00640-204ENST00000557295 S1PR4O95977 384 aa9.69□□□□□ -0.86
LINC00640-204ENST00000557295 KCNQ4P56696 695 aa9.69□□□□□ -0.86
LINC00640-204ENST00000557295 PDXDC2PQ6P474 469 aa9.69□□□□□ -0.86
LINC00640-204ENST00000557295 COL23A1Q86Y22 540 aaPredicted RBP9.69□□□□□ -0.86
LINC00640-204ENST00000557295 ARHGAP9Q9BRR9 750 aa9.69□□□□□ -0.86
LINC00640-204ENST00000557295 COL24A1Q17RW2 1714 aa9.68□□□□□ -0.86
LINC00640-204ENST00000557295 PIK3C2AO00443 1686 aa9.68□□□□□ -0.86
LINC00640-204ENST00000557295 ANKRD36BQ8N2N9 1353 aa9.68□□□□□ -0.86
LINC00640-204ENST00000557295 GPR37L1O60883 481 aa9.68□□□□□ -0.86
LINC00640-204ENST00000557295 GPSM3Q9Y4H4 160 aa9.68□□□□□ -0.86
LINC00640-204ENST00000557295 PCDHB9Q9Y5E1 797 aa9.68□□□□□ -0.86
LINC00640-204ENST00000557295 WNK3Q9BYP7 1800 aa9.68□□□□□ -0.86
LINC00640-204ENST00000557295 RAB3GAP2Q9H2M9 1393 aa9.67□□□□□ -0.86
LINC00640-204ENST00000557295 EVC2Q86UK5 1308 aa9.67□□□□□ -0.86
LINC00640-204ENST00000557295 LMOD1P29536 600 aaPredicted RBP9.67□□□□□ -0.86
LINC00640-204ENST00000557295 MCCD1P59942 119 aaPredicted RBP9.67□□□□□ -0.86
LINC00640-204ENST00000557295 NKX2-3Q8TAU0 364 aa9.67□□□□□ -0.86
LINC00640-204ENST00000557295 DDX54Q8TDD1 881 aaKnown RBP9.67□□□□□ -0.86
LINC00640-204ENST00000557295 ANKRD24Q8TF21 1146 aa9.67□□□□□ -0.86
LINC00640-204ENST00000557295 PPP1R12CQ9BZL4 782 aa9.67□□□□□ -0.86
LINC00640-204ENST00000557295 CCNL1Q9UK58 526 aaPredicted RBP9.67□□□□□ -0.86
LINC00640-204ENST00000557295 FCF1Q9Y324 198 aaKnown RBP9.67□□□□□ -0.86
LINC00640-204ENST00000557295 AKAP12Q02952 1782 aa9.67□□□□□ -0.86
LINC00640-204ENST00000557295 NSD2O96028 1365 aa9.66□□□□□ -0.86
LINC00640-204ENST00000557295 USP31Q70CQ4 1352 aa9.66□□□□□ -0.86
LINC00640-204ENST00000557295 MAGEB6P1A0A0J9YX57 407 aa9.66□□□□□ -0.86
LINC00640-204ENST00000557295 TOMM70O94826 608 aa9.66□□□□□ -0.86
LINC00640-204ENST00000557295 HMGB2P26583 209 aaKnown RBP9.66□□□□□ -0.86
LINC00640-204ENST00000557295 COL13A1Q5TAT6 717 aaPredicted RBP9.66□□□□□ -0.86
LINC00640-204ENST00000557295 MSL1Q68DK7 614 aa9.66□□□□□ -0.86
LINC00640-204ENST00000557295 PPP1R18Q6NYC8 613 aa9.66□□□□□ -0.86
LINC00640-204ENST00000557295 FLAD1Q8NFF5 587 aa9.66□□□□□ -0.86
LINC00640-204ENST00000557295 ADAMTS19Q8TE59 1207 aa9.66□□□□□ -0.86
LINC00640-204ENST00000557295 CARD14Q9BXL6 1004 aa9.66□□□□□ -0.86
LINC00640-204ENST00000557295 TFIP11Q9UBB9 837 aaKnown RBP9.66□□□□□ -0.86
LINC00640-204ENST00000557295 PALM3A6NDB9 673 aaPredicted RBP9.65□□□□□ -0.86
LINC00640-204ENST00000557295 PDE4CQ08493 712 aa9.65□□□□□ -0.86
LINC00640-204ENST00000557295 SLFNL1Q499Z3 407 aa9.65□□□□□ -0.86
LINC00640-204ENST00000557295 DZIP3Q86Y13 1208 aaKnown RBP9.65□□□□□ -0.86
LINC00640-204ENST00000557295 JMYQ8N9B5 988 aa9.65□□□□□ -0.86
LINC00640-204ENST00000557295 SYTL4Q96C24 671 aaPredicted RBP9.65□□□□□ -0.86
LINC00640-204ENST00000557295 KTN1Q86UP2 1357 aaKnown RBP9.64□□□□□ -0.87
LINC00640-204ENST00000557295 PRELPP51888 382 aa9.64□□□□□ -0.87
LINC00640-204ENST00000557295 BPHLQ86WA6 291 aaPredicted RBP9.64□□□□□ -0.87
LINC00640-204ENST00000557295 QSER1Q2KHR3 1735 aa9.64□□□□□ -0.87
LINC00640-204ENST00000557295 IGSF1Q8N6C5 1336 aa9.63□□□□□ -0.87
LINC00640-204ENST00000557295 LINC01559Q495D7 138 aa9.63□□□□□ -0.87
LINC00640-204ENST00000557295 PTCRAQ6ISU1 281 aaPredicted RBP9.63□□□□□ -0.87
LINC00640-204ENST00000557295 BAP1Q92560 729 aa9.63□□□□□ -0.87
LINC00640-204ENST00000557295 PBXIP1Q96AQ6 731 aa9.63□□□□□ -0.87
LINC00640-204ENST00000557295 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.63□□□□□ -0.87
LINC00640-204ENST00000557295 BTAF1O14981 1849 aa9.63□□□□□ -0.87
LINC00640-204ENST00000557295 USP47Q96K76 1375 aa9.63□□□□□ -0.87
LINC00640-204ENST00000557295 QRICH2Q9H0J4 1663 aa9.62□□□□□ -0.87
LINC00640-204ENST00000557295 TNS4Q8IZW8 715 aa9.62□□□□□ -0.87
LINC00640-204ENST00000557295 ADAM32Q8TC27 787 aa9.62□□□□□ -0.87
LINC00640-204ENST00000557295 KLRG1Q96E93 195 aa9.62□□□□□ -0.87
LINC00640-204ENST00000557295 KIAA1210Q9ULL0 1709 aa9.62□□□□□ -0.87
LINC00640-204ENST00000557295 SKIP12755 728 aa9.61□□□□□ -0.87
LINC00640-204ENST00000557295 NME9Q86XW9 330 aa9.61□□□□□ -0.87
LINC00640-204ENST00000557295 ZCRB1Q8TBF4 217 aaKnown RBP9.61□□□□□ -0.87
LINC00640-204ENST00000557295 IP6K1Q92551 441 aa9.61□□□□□ -0.87
LINC00640-204ENST00000557295 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.6□□□□□ -0.87
LINC00640-204ENST00000557295 ATP9BO43861 1147 aa9.6□□□□□ -0.87
LINC00640-204ENST00000557295 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.6□□□□□ -0.87
LINC00640-204ENST00000557295 SBNO2Q9Y2G9 1366 aa9.6□□□□□ -0.87
LINC00640-204ENST00000557295 PPEF1O14829 653 aaPredicted RBP9.59□□□□□ -0.87
LINC00640-204ENST00000557295 FSTL1Q12841 308 aa9.59□□□□□ -0.87
LINC00640-204ENST00000557295 CDCA8Q53HL2 280 aa9.59□□□□□ -0.87
LINC00640-204ENST00000557295 TBC1D9Q6ZT07 1266 aa9.59□□□□□ -0.87
LINC00640-204ENST00000557295 RNF135Q8IUD6 432 aa9.59□□□□□ -0.87
LINC00640-204ENST00000557295 PRKD2Q9BZL6 878 aa9.59□□□□□ -0.87
LINC00640-204ENST00000557295 VRTNQ9H8Y1 702 aa9.59□□□□□ -0.87
LINC00640-204ENST00000557295 ZNF511Q8NB15 262 aa9.58□□□□□ -0.88
LINC00640-204ENST00000557295 SLC10A4Q96EP9 437 aa9.58□□□□□ -0.88
LINC00640-204ENST00000557295 NMRK2Q9NPI5 230 aa9.58□□□□□ -0.88
LINC00640-204ENST00000557295 CEP126Q9P2H0 1117 aa9.58□□□□□ -0.88
LINC00640-204ENST00000557295 WWC3Q9ULE0 1092 aa9.58□□□□□ -0.88
LINC00640-204ENST00000557295 CGNL1Q0VF96 1302 aa9.57□□□□□ -0.88
LINC00640-204ENST00000557295 CICQ96RK0 1608 aaPredicted RBP9.57□□□□□ -0.88
LINC00640-204ENST00000557295 AMIGO3Q86WK7 504 aa9.57□□□□□ -0.88
LINC00640-204ENST00000557295 NFATC2IPQ8NCF5 419 aa9.57□□□□□ -0.88
LINC00640-204ENST00000557295 UCN2Q96RP3 112 aa9.57□□□□□ -0.88
LINC00640-204ENST00000557295 MAFBQ9Y5Q3 323 aaPredicted RBP9.57□□□□□ -0.88
LINC00640-204ENST00000557295 V9GY48 417 aaPredicted RBP9.57□□□□□ -0.88
LINC00640-204ENST00000557295 PALLDQ8WX93 1383 aa9.57□□□□□ -0.88
LINC00640-204ENST00000557295 NSD3Q9BZ95 1437 aa9.56□□□□□ -0.88
LINC00640-204ENST00000557295 CD163L1Q9NR16 1453 aa9.56□□□□□ -0.88
LINC00640-204ENST00000557295 CD2BP2O95400 341 aaKnown RBP9.56□□□□□ -0.88
LINC00640-204ENST00000557295 SSFA2P28290 1259 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms