RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 UTRNP46939 3433 aa26.44■■□□□ 1.82
SEC23A-213ENST00000557280 UTYO14607 1347 aa26.43■■□□□ 1.82
SEC23A-213ENST00000557280 EPHA10Q5JZY3 1008 aa26.43■■□□□ 1.82
SEC23A-213ENST00000557280 INTS3Q68E01 1043 aaKnown RBP26.43■■□□□ 1.82
SEC23A-213ENST00000557280 RBM17Q96I25 401 aaKnown RBP26.43■■□□□ 1.82
SEC23A-213ENST00000557280 PLA2G12BQ9BX93 195 aa26.43■■□□□ 1.82
SEC23A-213ENST00000557280 MYH3P11055 1940 aa26.42■■□□□ 1.82
SEC23A-213ENST00000557280 OLFM4Q6UX06 510 aa26.42■■□□□ 1.82
SEC23A-213ENST00000557280 TMEM57Q8N5G2 664 aa26.42■■□□□ 1.82
SEC23A-213ENST00000557280 SUCLG2Q96I99 432 aa26.42■■□□□ 1.82
SEC23A-213ENST00000557280 CRAMP1Q96RY5 1269 aa26.42■■□□□ 1.82
SEC23A-213ENST00000557280 FOXO4P98177 505 aa26.41■■□□□ 1.82
SEC23A-213ENST00000557280 TTLL11Q8NHH1 800 aa26.41■■□□□ 1.82
SEC23A-213ENST00000557280 KAZALD1Q96I82 304 aa26.41■■□□□ 1.82
SEC23A-213ENST00000557280 SEC31BQ9NQW1 1179 aa26.41■■□□□ 1.82
SEC23A-213ENST00000557280 C21orf2O43822 256 aa26.4■■□□□ 1.82
SEC23A-213ENST00000557280 HSP90B1P14625 803 aaKnown RBP26.39■■□□□ 1.82
SEC23A-213ENST00000557280 ALDH1B1P30837 517 aa26.39■■□□□ 1.82
SEC23A-213ENST00000557280 DDX46Q7L014 1031 aaKnown RBP26.39■■□□□ 1.82
SEC23A-213ENST00000557280 DZIP1LQ8IYY4 767 aaKnown RBP26.39■■□□□ 1.82
SEC23A-213ENST00000557280 PANK1Q8TE04 598 aa26.39■■□□□ 1.82
SEC23A-213ENST00000557280 C7orf43Q8WVR3 580 aa26.39■■□□□ 1.82
SEC23A-213ENST00000557280 CELF1Q92879 486 aaKnown RBP26.39■■□□□ 1.82
SEC23A-213ENST00000557280 MEIS3Q99687 375 aa26.39■■□□□ 1.82
SEC23A-213ENST00000557280 GREM2Q9H772 168 aa26.39■■□□□ 1.82
SEC23A-213ENST00000557280 CCDC152Q4G0S7 254 aa26.38■■□□□ 1.81
SEC23A-213ENST00000557280 FTSJ3Q8IY81 847 aaKnown RBP26.38■■□□□ 1.81
SEC23A-213ENST00000557280 PPEF1O14829 653 aaPredicted RBP26.37■■□□□ 1.81
SEC23A-213ENST00000557280 GRAPQ13588 217 aa26.37■■□□□ 1.81
SEC23A-213ENST00000557280 FAM161AQ3B820 660 aa26.37■■□□□ 1.81
SEC23A-213ENST00000557280 GRAPLQ8TC17 118 aaPredicted RBP26.37■■□□□ 1.81
SEC23A-213ENST00000557280 CSF1RP07333 972 aa26.36■■□□□ 1.81
SEC23A-213ENST00000557280 DCAF8L1A6NGE4 600 aa26.35■■□□□ 1.81
SEC23A-213ENST00000557280 C20orf194Q5TEA3 1177 aa26.35■■□□□ 1.81
SEC23A-213ENST00000557280 ANKRD44Q8N8A2 993 aa26.35■■□□□ 1.81
SEC23A-213ENST00000557280 SNED1Q8TER0 1413 aa26.35■■□□□ 1.81
SEC23A-213ENST00000557280 BICC1Q9H694 974 aaKnown RBP26.35■■□□□ 1.81
SEC23A-213ENST00000557280 RTL9Q8NET4 1388 aa26.34■■□□□ 1.81
SEC23A-213ENST00000557280 GRIN3BO60391 1043 aa26.34■■□□□ 1.81
SEC23A-213ENST00000557280 LMBR1LQ6UX01 489 aa26.34■■□□□ 1.81
SEC23A-213ENST00000557280 ARHGAP27Q6ZUM4 889 aa26.34■■□□□ 1.81
SEC23A-213ENST00000557280 RASSF7Q02833 373 aa26.33■■□□□ 1.81
SEC23A-213ENST00000557280 ITPRIPQ8IWB1 547 aa26.33■■□□□ 1.81
SEC23A-213ENST00000557280 LRRC37AA6NMS7 1700 aa26.32■■□□□ 1.8
SEC23A-213ENST00000557280 NFKBIEO00221 500 aa26.32■■□□□ 1.8
SEC23A-213ENST00000557280 UBTFL1P0CB47 393 aaPredicted RBP26.32■■□□□ 1.8
SEC23A-213ENST00000557280 SPEF2Q9C093 1822 aa26.32■■□□□ 1.8
SEC23A-213ENST00000557280 ITGA6P23229 1130 aa26.31■■□□□ 1.8
SEC23A-213ENST00000557280 CHMP3Q9Y3E7 222 aa26.31■■□□□ 1.8
SEC23A-213ENST00000557280 LRRFIP2Q9Y608 721 aaKnown RBP26.31■■□□□ 1.8
SEC23A-213ENST00000557280 FER1L6Q2WGJ9 1857 aa26.31■■□□□ 1.8
SEC23A-213ENST00000557280 BBOX1O75936 387 aa26.3■■□□□ 1.8
SEC23A-213ENST00000557280 PRELPP51888 382 aa26.3■■□□□ 1.8
SEC23A-213ENST00000557280 RABL6Q3YEC7 729 aaPredicted RBP26.3■■□□□ 1.8
SEC23A-213ENST00000557280 ATP6V0A2Q9Y487 856 aa26.3■■□□□ 1.8
SEC23A-213ENST00000557280 RPS8P62241 208 aaKnown RBP26.29■■□□□ 1.8
SEC23A-213ENST00000557280 CCDC93Q567U6 631 aa26.29■■□□□ 1.8
SEC23A-213ENST00000557280 RRP1P56182 461 aaKnown RBP26.28■■□□□ 1.8
SEC23A-213ENST00000557280 ANKRD18AQ8IVF6 992 aa26.27■■□□□ 1.8
SEC23A-213ENST00000557280 CDC5LQ99459 802 aaKnown RBP26.27■■□□□ 1.8
SEC23A-213ENST00000557280 COG6Q9Y2V7 657 aa26.27■■□□□ 1.8
SEC23A-213ENST00000557280 DUOX1Q9NRD9 1551 aa26.26■■□□□ 1.79
SEC23A-213ENST00000557280 GNAI3P08754 354 aa26.26■■□□□ 1.79
SEC23A-213ENST00000557280 SOGA3Q5TF21 947 aa26.26■■□□□ 1.79
SEC23A-213ENST00000557280 SP8Q8IXZ3 490 aa26.26■■□□□ 1.79
SEC23A-213ENST00000557280 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.26■■□□□ 1.79
SEC23A-213ENST00000557280 ZNF594Q96JF6 807 aaPredicted RBP26.26■■□□□ 1.79
SEC23A-213ENST00000557280 ANKRD18BA2A2Z9 1011 aa26.25■■□□□ 1.79
SEC23A-213ENST00000557280 IFIT5Q13325 482 aaKnown RBP26.25■■□□□ 1.79
SEC23A-213ENST00000557280 MVPQ14764 893 aaKnown RBP26.25■■□□□ 1.79
SEC23A-213ENST00000557280 LTBP1Q14766 1721 aa26.25■■□□□ 1.79
SEC23A-213ENST00000557280 ZBTB7BO15156 539 aaPredicted RBP26.24■■□□□ 1.79
SEC23A-213ENST00000557280 MS4A1P11836 297 aa26.24■■□□□ 1.79
SEC23A-213ENST00000557280 TAOK3Q9H2K8 898 aa26.24■■□□□ 1.79
SEC23A-213ENST00000557280 C1orf115Q9H7X2 142 aa26.24■■□□□ 1.79
SEC23A-213ENST00000557280 PDE3AQ14432 1141 aa26.23■■□□□ 1.79
SEC23A-213ENST00000557280 TMC4Q7Z404 712 aa26.23■■□□□ 1.79
SEC23A-213ENST00000557280 LTBP3Q9NS15 1303 aa26.22■■□□□ 1.79
SEC23A-213ENST00000557280 GPSM2P81274 684 aa26.22■■□□□ 1.79
SEC23A-213ENST00000557280 CCDC57Q2TAC2 916 aa26.22■■□□□ 1.79
SEC23A-213ENST00000557280 CC2D2BQ6DHV5 1058 aa26.22■■□□□ 1.79
SEC23A-213ENST00000557280 RTKN2Q8IZC4 609 aa26.22■■□□□ 1.79
SEC23A-213ENST00000557280 SBF1O95248 1867 aa26.21■■□□□ 1.79
SEC23A-213ENST00000557280 IGHMBP2P38935 993 aaKnown RBP26.21■■□□□ 1.79
SEC23A-213ENST00000557280 FKBP4Q02790 459 aaKnown RBP eCLIP26.21■■□□□ 1.79
SEC23A-213ENST00000557280 KLHDC4Q8TBB5 520 aa26.21■■□□□ 1.79
SEC23A-213ENST00000557280 ZNF277Q9NRM2 450 aaPredicted RBP26.21■■□□□ 1.79
SEC23A-213ENST00000557280 BSDC1Q9NW68 430 aaPredicted RBP26.21■■□□□ 1.79
SEC23A-213ENST00000557280 GNAI2P04899 355 aa26.2■■□□□ 1.78
SEC23A-213ENST00000557280 RFX5P48382 616 aaPredicted RBP26.2■■□□□ 1.78
SEC23A-213ENST00000557280 C9orf131Q5VYM1 1079 aa26.19■■□□□ 1.78
SEC23A-213ENST00000557280 MPNDQ8N594 471 aa26.19■■□□□ 1.78
SEC23A-213ENST00000557280 PSMD1Q99460 953 aa26.19■■□□□ 1.78
SEC23A-213ENST00000557280 MINPP1Q9UNW1 487 aa26.19■■□□□ 1.78
SEC23A-213ENST00000557280 CHD4Q14839 1912 aa26.19■■□□□ 1.78
SEC23A-213ENST00000557280 COL4A5P29400 1685 aa26.19■■□□□ 1.78
SEC23A-213ENST00000557280 TAF7LQ5H9L4 462 aa26.18■■□□□ 1.78
SEC23A-213ENST00000557280 DPP8Q6V1X1 898 aaPredicted RBP26.18■■□□□ 1.78
SEC23A-213ENST00000557280 MPHOSPH8Q99549 860 aa26.18■■□□□ 1.78
SEC23A-213ENST00000557280 PUS3Q9BZE2 481 aaKnown RBP26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms