RNA–Protein interactions for RNA: ENST00000557273.5

RDH11-209, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-209ENST00000557273 GRAPQ13588 217 aa13.27□□□□□ -0.29
RDH11-209ENST00000557273 RALBP1Q15311 655 aa13.27□□□□□ -0.29
RDH11-209ENST00000557273 DPP8Q6V1X1 898 aaPredicted RBP13.27□□□□□ -0.29
RDH11-209ENST00000557273 COPS6Q7L5N1 327 aa13.27□□□□□ -0.29
RDH11-209ENST00000557273 MPNDQ8N594 471 aa13.27□□□□□ -0.29
RDH11-209ENST00000557273 GRAPLQ8TC17 118 aaPredicted RBP13.27□□□□□ -0.29
RDH11-209ENST00000557273 SH3TC1Q8TE82 1336 aa13.27□□□□□ -0.29
RDH11-209ENST00000557273 TRAF5O00463 557 aa13.26□□□□□ -0.29
RDH11-209ENST00000557273 ANXA1P04083 346 aa13.26□□□□□ -0.29
RDH11-209ENST00000557273 GMPSP49915 693 aaPredicted RBP13.26□□□□□ -0.29
RDH11-209ENST00000557273 CIAPIN1Q6FI81 312 aa13.26□□□□□ -0.29
RDH11-209ENST00000557273 CYP4F22Q6NT55 531 aa13.26□□□□□ -0.29
RDH11-209ENST00000557273 DDX46Q7L014 1031 aaKnown RBP13.26□□□□□ -0.29
RDH11-209ENST00000557273 SAPCD2Q86UD0 394 aa13.26□□□□□ -0.29
RDH11-209ENST00000557273 XAGE3Q8WTP9 111 aa13.26□□□□□ -0.29
RDH11-209ENST00000557273 ABHD8Q96I13 439 aa13.26□□□□□ -0.29
RDH11-209ENST00000557273 GPR101Q96P66 508 aaPredicted RBP13.26□□□□□ -0.29
RDH11-209ENST00000557273 CHL1O00533 1208 aa13.25□□□□□ -0.29
RDH11-209ENST00000557273 HOXB7P09629 217 aa13.25□□□□□ -0.29
RDH11-209ENST00000557273 TNIP1Q15025 636 aa13.25□□□□□ -0.29
RDH11-209ENST00000557273 BEGAINQ9BUH8 593 aa13.25□□□□□ -0.29
RDH11-209ENST00000557273 TRMT112Q9UI30 125 aaKnown RBP13.25□□□□□ -0.29
RDH11-209ENST00000557273 POLR2AP24928 1970 aaKnown RBP13.24□□□□□ -0.29
RDH11-209ENST00000557273 CA12O43570 354 aa13.24□□□□□ -0.29
RDH11-209ENST00000557273 HCLS1P14317 486 aaPredicted RBP13.24□□□□□ -0.29
RDH11-209ENST00000557273 YDJCA8MPS7 323 aa13.23□□□□□ -0.29
RDH11-209ENST00000557273 CELF2O95319 508 aaKnown RBP13.23□□□□□ -0.29
RDH11-209ENST00000557273 HIRAP54198 1017 aaPredicted RBP13.23□□□□□ -0.29
RDH11-209ENST00000557273 SF3B3Q15393 1217 aaKnown RBP13.23□□□□□ -0.29
RDH11-209ENST00000557273 PAXIP1Q6ZW49 1069 aaPredicted RBP13.23□□□□□ -0.29
RDH11-209ENST00000557273 CDC37L1Q7L3B6 337 aa13.23□□□□□ -0.29
RDH11-209ENST00000557273 PLBD2Q8NHP8 589 aa13.23□□□□□ -0.29
RDH11-209ENST00000557273 DPF2Q92785 391 aa13.23□□□□□ -0.29
RDH11-209ENST00000557273 ISCA1Q9BUE6 129 aa13.23□□□□□ -0.29
RDH11-209ENST00000557273 GLIS2Q9BZE0 524 aaPredicted RBP13.23□□□□□ -0.29
RDH11-209ENST00000557273 CASP8AP2Q9UKL3 1982 aa13.22□□□□□ -0.29
RDH11-209ENST00000557273 RAD17O75943 681 aa13.22□□□□□ -0.29
RDH11-209ENST00000557273 BRPF1P55201 1214 aaPredicted RBP13.22□□□□□ -0.29
RDH11-209ENST00000557273 AIMP1Q12904 312 aaKnown RBP13.22□□□□□ -0.29
RDH11-209ENST00000557273 TRPM4Q8TD43 1214 aa13.22□□□□□ -0.29
RDH11-209ENST00000557273 BCL2L13Q9BXK5 485 aa13.22□□□□□ -0.29
RDH11-209ENST00000557273 PSME4Q14997 1843 aa13.21□□□□□ -0.29
RDH11-209ENST00000557273 TRIM28Q13263 835 aaKnown RBP13.21□□□□□ -0.29
RDH11-209ENST00000557273 CHPF2Q9P2E5 772 aa13.21□□□□□ -0.29
RDH11-209ENST00000557273 CNOT7Q9UIV1 285 aaKnown RBP13.21□□□□□ -0.29
RDH11-209ENST00000557273 TRIM35Q9UPQ4 493 aa13.21□□□□□ -0.29
RDH11-209ENST00000557273 COL4A1P02462 1669 aa13.21□□□□□ -0.3
RDH11-209ENST00000557273 ZNF609O15014 1411 aa13.21□□□□□ -0.3
RDH11-209ENST00000557273 MYBBP1AQ9BQG0 1328 aaKnown RBP13.2□□□□□ -0.3
RDH11-209ENST00000557273 SCN9AQ15858 1988 aa13.2□□□□□ -0.3
RDH11-209ENST00000557273 H7C1D1 291 aa13.2□□□□□ -0.3
RDH11-209ENST00000557273 AOC2O75106 756 aa13.2□□□□□ -0.3
RDH11-209ENST00000557273 RPS12P25398 132 aaKnown RBP13.2□□□□□ -0.3
RDH11-209ENST00000557273 RGS19P49795 217 aa13.2□□□□□ -0.3
RDH11-209ENST00000557273 KRT24Q2M2I5 525 aa13.2□□□□□ -0.3
RDH11-209ENST00000557273 HDGFL1Q5TGJ6 251 aa13.2□□□□□ -0.3
RDH11-209ENST00000557273 ANKRD13DQ6ZTN6 518 aa13.2□□□□□ -0.3
RDH11-209ENST00000557273 NECTIN2Q92692 538 aa13.2□□□□□ -0.3
RDH11-209ENST00000557273 DBF4Q9UBU7 674 aaPredicted RBP13.2□□□□□ -0.3
RDH11-209ENST00000557273 NOGQ13253 232 aa13.19□□□□□ -0.3
RDH11-209ENST00000557273 GRM1Q13255 1194 aa13.19□□□□□ -0.3
RDH11-209ENST00000557273 WASHC4Q2M389 1173 aa13.19□□□□□ -0.3
RDH11-209ENST00000557273 MICALL2Q8IY33 904 aa13.19□□□□□ -0.3
RDH11-209ENST00000557273 CELF1Q92879 486 aaKnown RBP13.19□□□□□ -0.3
RDH11-209ENST00000557273 RUNDC1Q96C34 613 aa13.19□□□□□ -0.3
RDH11-209ENST00000557273 SHTN1A0MZ66 631 aa13.18□□□□□ -0.3
RDH11-209ENST00000557273 PSMD14O00487 310 aa13.18□□□□□ -0.3
RDH11-209ENST00000557273 FAM89AQ96GI7 184 aa13.18□□□□□ -0.3
RDH11-209ENST00000557273 CFAP44Q96MT7 982 aa13.18□□□□□ -0.3
RDH11-209ENST00000557273 HYPKQ9NX55 129 aa13.18□□□□□ -0.3
RDH11-209ENST00000557273 EYA3Q99504 573 aa13.17□□□□□ -0.3
RDH11-209ENST00000557273 DBNDD1Q9H9R9 158 aa13.17□□□□□ -0.3
RDH11-209ENST00000557273 PODXL2Q9NZ53 605 aa13.17□□□□□ -0.3
RDH11-209ENST00000557273 POLLQ9UGP5 575 aa13.17□□□□□ -0.3
RDH11-209ENST00000557273 NSFL1CQ9UNZ2 370 aaKnown RBP13.17□□□□□ -0.3
RDH11-209ENST00000557273 RTL9Q8NET4 1388 aa13.17□□□□□ -0.3
RDH11-209ENST00000557273 AKAP11Q9UKA4 1901 aa13.17□□□□□ -0.3
RDH11-209ENST00000557273 ECE2O60344 883 aa13.16□□□□□ -0.3
RDH11-209ENST00000557273 HSP90B1P14625 803 aaKnown RBP13.16□□□□□ -0.3
RDH11-209ENST00000557273 RPS8P62241 208 aaKnown RBP13.16□□□□□ -0.3
RDH11-209ENST00000557273 GPSM2P81274 684 aa13.16□□□□□ -0.3
RDH11-209ENST00000557273 NEUROD2Q15784 382 aa13.16□□□□□ -0.3
RDH11-209ENST00000557273 FAM161AQ3B820 660 aa13.16□□□□□ -0.3
RDH11-209ENST00000557273 CCDC146Q8IYE0 955 aa13.16□□□□□ -0.3
RDH11-209ENST00000557273 ZBTB12Q9Y330 459 aaPredicted RBP13.16□□□□□ -0.3
RDH11-209ENST00000557273 ATP5J2-PTCD1G3V325 749 aa13.15□□□□□ -0.3
RDH11-209ENST00000557273 IRS4O14654 1257 aaPredicted RBP13.15□□□□□ -0.3
RDH11-209ENST00000557273 VIL1P09327 827 aaKnown RBP13.15□□□□□ -0.3
RDH11-209ENST00000557273 ZNF853P0CG23 659 aa13.15□□□□□ -0.3
RDH11-209ENST00000557273 HUNKP57058 714 aa13.15□□□□□ -0.3
RDH11-209ENST00000557273 DUSP27Q5VZP5 1158 aa13.15□□□□□ -0.3
RDH11-209ENST00000557273 SAMD7Q7Z3H4 446 aa13.15□□□□□ -0.3
RDH11-209ENST00000557273 KRT26Q7Z3Y9 468 aa13.15□□□□□ -0.3
RDH11-209ENST00000557273 USP48Q86UV5 1035 aa13.15□□□□□ -0.3
RDH11-209ENST00000557273 ZBTB38Q8NAP3 1195 aaPredicted RBP13.15□□□□□ -0.3
RDH11-209ENST00000557273 TBC1D16Q8TBP0 767 aa13.15□□□□□ -0.3
RDH11-209ENST00000557273 ZNF408Q9H9D4 720 aa13.15□□□□□ -0.3
RDH11-209ENST00000557273 SAGE1Q9NXZ1 904 aa13.15□□□□□ -0.3
RDH11-209ENST00000557273 TSKSQ9UJT2 592 aa13.15□□□□□ -0.3
RDH11-209ENST00000557273 MYH3P11055 1940 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms