RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 CCDC85AQ96PX6 553 aaPredicted RBP13.76□□□□□ -0.21
NEK9-210ENST00000557026 ASXL1Q8IXJ9 1541 aa13.76□□□□□ -0.21
NEK9-210ENST00000557026 MAP3K5Q99683 1374 aa13.76□□□□□ -0.21
NEK9-210ENST00000557026 RBM26Q5T8P6 1007 aaKnown RBP13.75□□□□□ -0.21
NEK9-210ENST00000557026 MCTP2Q6DN12 878 aa13.75□□□□□ -0.21
NEK9-210ENST00000557026 IMPG2Q9BZV3 1241 aa13.75□□□□□ -0.21
NEK9-210ENST00000557026 SLC5A4Q9NY91 659 aa13.75□□□□□ -0.21
NEK9-210ENST00000557026 AMER1Q5JTC6 1135 aaPredicted RBP13.75□□□□□ -0.21
NEK9-210ENST00000557026 USHBP1Q8N6Y0 703 aa13.75□□□□□ -0.21
NEK9-210ENST00000557026 SSX2IPQ9Y2D8 614 aa13.75□□□□□ -0.21
NEK9-210ENST00000557026 POTEB2H3BUK9 544 aa13.75□□□□□ -0.21
NEK9-210ENST00000557026 CEBPZQ03701 1054 aaKnown RBP13.75□□□□□ -0.21
NEK9-210ENST00000557026 ZNF771Q7L3S4 317 aaPredicted RBP13.75□□□□□ -0.21
NEK9-210ENST00000557026 GRM8O00222 908 aa13.75□□□□□ -0.21
NEK9-210ENST00000557026 GNA11P29992 359 aa13.75□□□□□ -0.21
NEK9-210ENST00000557026 ACTN2P35609 894 aa13.75□□□□□ -0.21
NEK9-210ENST00000557026 METAP2P50579 478 aaKnown RBP eCLIP13.75□□□□□ -0.21
NEK9-210ENST00000557026 KRT13P13646 458 aa13.74□□□□□ -0.21
NEK9-210ENST00000557026 LEKR1Q6ZMV7 388 aa13.74□□□□□ -0.21
NEK9-210ENST00000557026 CCDC82Q8N4S0 544 aa13.74□□□□□ -0.21
NEK9-210ENST00000557026 POLR3AO14802 1390 aaPredicted RBP13.74□□□□□ -0.21
NEK9-210ENST00000557026 CYP7A1P22680 504 aa13.74□□□□□ -0.21
NEK9-210ENST00000557026 RBM25P49756 843 aaKnown RBP13.74□□□□□ -0.21
NEK9-210ENST00000557026 SYCP3Q8IZU3 236 aa13.74□□□□□ -0.21
NEK9-210ENST00000557026 KIAA0556O60303 1618 aa13.74□□□□□ -0.21
NEK9-210ENST00000557026 PAFAH1B1P43034 410 aa13.74□□□□□ -0.21
NEK9-210ENST00000557026 SSR1P43307 286 aaKnown RBP13.74□□□□□ -0.21
NEK9-210ENST00000557026 GSDMDP57764 484 aa13.74□□□□□ -0.21
NEK9-210ENST00000557026 BMP2KLQ5H9B9 411 aa13.74□□□□□ -0.21
NEK9-210ENST00000557026 FILIP1Q7Z7B0 1213 aa13.74□□□□□ -0.21
NEK9-210ENST00000557026 CCDC117Q8IWD4 279 aaPredicted RBP13.74□□□□□ -0.21
NEK9-210ENST00000557026 ALS2CR12Q96Q35 445 aa13.74□□□□□ -0.21
NEK9-210ENST00000557026 TMOD4Q9NZQ9 345 aa13.74□□□□□ -0.21
NEK9-210ENST00000557026 GCOM1H8Y6P7 765 aaPredicted RBP13.74□□□□□ -0.21
NEK9-210ENST00000557026 MYZAPP0CAP1 466 aa13.74□□□□□ -0.21
NEK9-210ENST00000557026 NEK1Q96PY6 1258 aa13.74□□□□□ -0.21
NEK9-210ENST00000557026 GOLGA6L10A0A0M3HER8 536 aa13.73□□□□□ -0.21
NEK9-210ENST00000557026 PI4KAP2A4QPH2 592 aa13.73□□□□□ -0.21
NEK9-210ENST00000557026 ALDH1B1P30837 517 aa13.73□□□□□ -0.21
NEK9-210ENST00000557026 PI4KAP1Q8N8J0 262 aa13.73□□□□□ -0.21
NEK9-210ENST00000557026 RBM28Q9NW13 759 aaKnown RBP13.73□□□□□ -0.21
NEK9-210ENST00000557026 AXDND1Q5T1B0 1012 aaPredicted RBP13.73□□□□□ -0.21
NEK9-210ENST00000557026 SMARCC2Q8TAQ2 1214 aa13.73□□□□□ -0.21
NEK9-210ENST00000557026 TBC1D22AQ8WUA7 517 aa13.73□□□□□ -0.21
NEK9-210ENST00000557026 SREK1Q8WXA9 508 aaKnown RBP13.73□□□□□ -0.21
NEK9-210ENST00000557026 TBC1D5Q92609 795 aa13.73□□□□□ -0.21
NEK9-210ENST00000557026 ABCC1P33527 1531 aa13.73□□□□□ -0.21
NEK9-210ENST00000557026 GRIPAP1Q4V328 841 aa13.73□□□□□ -0.21
NEK9-210ENST00000557026 CCDC97Q96F63 343 aaPredicted RBP13.73□□□□□ -0.21
NEK9-210ENST00000557026 H0YHG0 523 aa13.73□□□□□ -0.21
NEK9-210ENST00000557026 CNBD1Q8NA66 436 aa13.73□□□□□ -0.21
NEK9-210ENST00000557026 USP16Q9Y5T5 823 aa13.73□□□□□ -0.21
NEK9-210ENST00000557026 ARHGEF12Q9NZN5 1544 aa13.72□□□□□ -0.21
NEK9-210ENST00000557026 CCDC66A2RUB6 948 aa13.72□□□□□ -0.21
NEK9-210ENST00000557026 SNX16P57768 344 aa13.72□□□□□ -0.21
NEK9-210ENST00000557026 PPP2R5BQ15173 497 aa13.72□□□□□ -0.21
NEK9-210ENST00000557026 CCDC40Q4G0X9 1142 aa13.72□□□□□ -0.21
NEK9-210ENST00000557026 STK11IPQ8N1F8 1099 aa13.72□□□□□ -0.21
NEK9-210ENST00000557026 CTAGE1Q96RT6 745 aa13.72□□□□□ -0.21
NEK9-210ENST00000557026 KDM4AO75164 1064 aa13.72□□□□□ -0.21
NEK9-210ENST00000557026 GCP02774 474 aa13.72□□□□□ -0.21
NEK9-210ENST00000557026 MAP3K9P80192 1104 aa13.72□□□□□ -0.21
NEK9-210ENST00000557026 CCDC183Q5T5S1 534 aa13.72□□□□□ -0.21
NEK9-210ENST00000557026 HOMER2Q9NSB8 354 aa13.72□□□□□ -0.21
NEK9-210ENST00000557026 SAMM50Q9Y512 469 aa13.72□□□□□ -0.21
NEK9-210ENST00000557026 SFPQP23246 707 aaKnown RBP eCLIP13.72□□□□□ -0.21
NEK9-210ENST00000557026 CFAP100Q494V2 611 aa13.72□□□□□ -0.21
NEK9-210ENST00000557026 CNNM3Q8NE01 707 aa13.72□□□□□ -0.21
NEK9-210ENST00000557026 TSNARE1Q96NA8 513 aa13.72□□□□□ -0.21
NEK9-210ENST00000557026 TRAPPC8Q9Y2L5 1435 aa13.72□□□□□ -0.21
NEK9-210ENST00000557026 SYCP2Q9BX26 1530 aa13.72□□□□□ -0.21
NEK9-210ENST00000557026 LDHBP07195 334 aaKnown RBP13.72□□□□□ -0.21
NEK9-210ENST00000557026 CHRNA2Q15822 529 aa13.72□□□□□ -0.21
NEK9-210ENST00000557026 IFIT1BQ5T764 474 aaKnown RBP13.72□□□□□ -0.21
NEK9-210ENST00000557026 XAGE3Q8WTP9 111 aa13.72□□□□□ -0.21
NEK9-210ENST00000557026 KIF21AQ7Z4S6 1674 aa13.71□□□□□ -0.21
NEK9-210ENST00000557026 MAGEB6P1A0A0J9YX57 407 aa13.71□□□□□ -0.21
NEK9-210ENST00000557026 SPDYE3A6NKU9 549 aa13.71□□□□□ -0.21
NEK9-210ENST00000557026 KIF5CO60282 957 aa13.71□□□□□ -0.21
NEK9-210ENST00000557026 KIAA0754O94854 1291 aa13.71□□□□□ -0.21
NEK9-210ENST00000557026 TTLL5Q6EMB2 1281 aa13.71□□□□□ -0.21
NEK9-210ENST00000557026 RRP36Q96EU6 259 aaKnown RBP13.71□□□□□ -0.21
NEK9-210ENST00000557026 ARHGEF10LQ9HCE6 1279 aa13.71□□□□□ -0.21
NEK9-210ENST00000557026 ENOX2Q16206 610 aaKnown RBP13.71□□□□□ -0.21
NEK9-210ENST00000557026 WDR66Q8TBY9 1149 aa13.71□□□□□ -0.21
NEK9-210ENST00000557026 CCDC8Q9H0W5 538 aaPredicted RBP13.71□□□□□ -0.21
NEK9-210ENST00000557026 PICK1Q9NRD5 415 aa13.71□□□□□ -0.21
NEK9-210ENST00000557026 TCOF1Q13428 1488 aaKnown RBP13.71□□□□□ -0.21
NEK9-210ENST00000557026 WDR62O43379 1518 aa13.71□□□□□ -0.21
NEK9-210ENST00000557026 MAP4K4O95819 1239 aaPredicted RBP13.71□□□□□ -0.21
NEK9-210ENST00000557026 TNFAIP1Q13829 316 aa13.71□□□□□ -0.21
NEK9-210ENST00000557026 ZBTB43O43298 467 aa13.71□□□□□ -0.22
NEK9-210ENST00000557026 PABPC4Q13310 644 aaKnown RBP eCLIP13.71□□□□□ -0.22
NEK9-210ENST00000557026 TMC4Q7Z404 712 aa13.71□□□□□ -0.22
NEK9-210ENST00000557026 SBNO1A3KN83 1393 aa13.71□□□□□ -0.22
NEK9-210ENST00000557026 H0YIN7 160 aa13.7□□□□□ -0.22
NEK9-210ENST00000557026 TUBB4AP04350 444 aa13.7□□□□□ -0.22
NEK9-210ENST00000557026 CCDC102BQ68D86 513 aa13.7□□□□□ -0.22
NEK9-210ENST00000557026 LRSAM1Q6UWE0 723 aa13.7□□□□□ -0.22
NEK9-210ENST00000557026 CTNNA2P26232 953 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms