RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 KCNK17Q96T54 332 aa8.02□□□□□ -1.13
ATXN3-245ENST00000556958 EYA1Q99502 592 aa8.02□□□□□ -1.13
ATXN3-245ENST00000556958 GGNBP2Q9H3C7 697 aa8.02□□□□□ -1.13
ATXN3-245ENST00000556958 ADARB2Q9NS39 739 aaKnown RBP8.02□□□□□ -1.13
ATXN3-245ENST00000556958 PPM1GO15355 546 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-245ENST00000556958 CYP19A1P11511 503 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-245ENST00000556958 NPR1P16066 1061 aa8.01□□□□□ -1.13
ATXN3-245ENST00000556958 SCNN1DP51172 638 aa8.01□□□□□ -1.13
ATXN3-245ENST00000556958 AMOTQ4VCS5 1084 aa8.01□□□□□ -1.13
ATXN3-245ENST00000556958 FBXO46Q6PJ61 603 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-245ENST00000556958 NPM2Q86SE8 214 aaKnown RBP8.01□□□□□ -1.13
ATXN3-245ENST00000556958 DNAJC10Q8IXB1 793 aa8.01□□□□□ -1.13
ATXN3-245ENST00000556958 CNBD1Q8NA66 436 aa8.01□□□□□ -1.13
ATXN3-245ENST00000556958 TMC2Q8TDI7 906 aa8.01□□□□□ -1.13
ATXN3-245ENST00000556958 SETDB2Q96T68 719 aa8.01□□□□□ -1.13
ATXN3-245ENST00000556958 A0A0C4DFX4 3053 aa8□□□□□ -1.13
ATXN3-245ENST00000556958 COL15A1P39059 1388 aa8□□□□□ -1.13
ATXN3-245ENST00000556958 CARMIL3Q8ND23 1372 aa8□□□□□ -1.13
ATXN3-245ENST00000556958 ALDH1B1P30837 517 aa8□□□□□ -1.13
ATXN3-245ENST00000556958 ZNF157P51786 506 aaPredicted RBP8□□□□□ -1.13
ATXN3-245ENST00000556958 C1orf141Q5JVX7 400 aa8□□□□□ -1.13
ATXN3-245ENST00000556958 TBC1D9BQ66K14 1250 aa8□□□□□ -1.13
ATXN3-245ENST00000556958 CCDC24Q8N4L8 307 aa8□□□□□ -1.13
ATXN3-245ENST00000556958 C2orf69Q8N8R5 385 aa8□□□□□ -1.13
ATXN3-245ENST00000556958 PTCD2Q8WV60 388 aaKnown RBP8□□□□□ -1.13
ATXN3-245ENST00000556958 PSMD1Q99460 953 aa8□□□□□ -1.13
ATXN3-245ENST00000556958 GLIS2Q9BZE0 524 aaPredicted RBP8□□□□□ -1.13
ATXN3-245ENST00000556958 PGAP2Q9UHJ9 254 aa8□□□□□ -1.13
ATXN3-245ENST00000556958 MAP2P11137 1827 aaKnown RBP8□□□□□ -1.13
ATXN3-245ENST00000556958 THSD7BQ9C0I4 1608 aa8□□□□□ -1.13
ATXN3-245ENST00000556958 GRIPAP1Q4V328 841 aa7.99□□□□□ -1.13
ATXN3-245ENST00000556958 CC2D2BQ6DHV5 1058 aa7.99□□□□□ -1.13
ATXN3-245ENST00000556958 ZNF530Q6P9A1 599 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-245ENST00000556958 CSRNP1Q96S65 589 aa7.99□□□□□ -1.13
ATXN3-245ENST00000556958 LTN1O94822 1766 aa7.99□□□□□ -1.13
ATXN3-245ENST00000556958 LTBP1Q14766 1721 aa7.98□□□□□ -1.13
ATXN3-245ENST00000556958 FAM155AB1AL88 458 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-245ENST00000556958 BHMG1C9JSJ3 638 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-245ENST00000556958 STARD3NLO95772 234 aa7.98□□□□□ -1.13
ATXN3-245ENST00000556958 CANXP27824 592 aaKnown RBP7.98□□□□□ -1.13
ATXN3-245ENST00000556958 LARGE2Q8N3Y3 721 aa7.98□□□□□ -1.13
ATXN3-245ENST00000556958 L3MBTL2Q969R5 705 aa7.98□□□□□ -1.13
ATXN3-245ENST00000556958 GPRC5DQ9NZD1 345 aa7.98□□□□□ -1.13
ATXN3-245ENST00000556958 ZBTB1Q9Y2K1 713 aa7.98□□□□□ -1.13
ATXN3-245ENST00000556958 EMILIN1Q9Y6C2 1016 aa7.98□□□□□ -1.13
ATXN3-245ENST00000556958 SCN4AP35499 1836 aa7.98□□□□□ -1.13
ATXN3-245ENST00000556958 TIAM2Q8IVF5 1701 aa7.98□□□□□ -1.13
ATXN3-245ENST00000556958 NCAPD2Q15021 1401 aa7.97□□□□□ -1.13
ATXN3-245ENST00000556958 EIF5P55010 431 aaKnown RBP7.97□□□□□ -1.13
ATXN3-245ENST00000556958 VSIG10Q8N0Z9 540 aa7.97□□□□□ -1.13
ATXN3-245ENST00000556958 ZNF296Q8WUU4 475 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-245ENST00000556958 GBA2Q9HCG7 927 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-245ENST00000556958 NOM1Q5C9Z4 860 aaKnown RBP7.96□□□□□ -1.14
ATXN3-245ENST00000556958 USP48Q86UV5 1035 aa7.96□□□□□ -1.14
ATXN3-245ENST00000556958 NIM1KQ8IY84 436 aa7.96□□□□□ -1.14
ATXN3-245ENST00000556958 CARD11Q9BXL7 1154 aa7.96□□□□□ -1.14
ATXN3-245ENST00000556958 CASP8AP2Q9UKL3 1982 aa7.96□□□□□ -1.14
ATXN3-245ENST00000556958 KLRG2A4D1S0 409 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-245ENST00000556958 GTPBP6O43824 516 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-245ENST00000556958 TPTE2Q6XPS3 522 aa7.95□□□□□ -1.14
ATXN3-245ENST00000556958 NBPF5PQ86XG9 351 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-245ENST00000556958 WNT2BQ93097 391 aa7.95□□□□□ -1.14
ATXN3-245ENST00000556958 SLC4A5Q9BY07 1137 aa7.95□□□□□ -1.14
ATXN3-245ENST00000556958 VPS33BQ9H267 617 aa7.95□□□□□ -1.14
ATXN3-245ENST00000556958 TSHZ2Q9NRE2 1034 aa7.95□□□□□ -1.14
ATXN3-245ENST00000556958 MON2Q7Z3U7 1717 aa7.95□□□□□ -1.14
ATXN3-245ENST00000556958 ADAMTSL1Q8N6G6 1762 aa7.94□□□□□ -1.14
ATXN3-245ENST00000556958 H7C1D1 291 aa7.94□□□□□ -1.14
ATXN3-245ENST00000556958 GPR25O00155 361 aa7.94□□□□□ -1.14
ATXN3-245ENST00000556958 SLC10A3P09131 477 aa7.94□□□□□ -1.14
ATXN3-245ENST00000556958 OLFM4Q6UX06 510 aa7.94□□□□□ -1.14
ATXN3-245ENST00000556958 BCL2L13Q9BXK5 485 aa7.94□□□□□ -1.14
ATXN3-245ENST00000556958 TEX13AQ9BXU3 409 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-245ENST00000556958 TMX4Q9H1E5 349 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-245ENST00000556958 RYDENQ9NUL5 291 aaKnown RBP7.94□□□□□ -1.14
ATXN3-245ENST00000556958 TBC1D2BQ9UPU7 963 aa7.94□□□□□ -1.14
ATXN3-245ENST00000556958 ZNF831Q5JPB2 1677 aa7.93□□□□□ -1.14
ATXN3-245ENST00000556958 FKTNO75072 461 aa7.93□□□□□ -1.14
ATXN3-245ENST00000556958 TBC1D8O95759 1140 aa7.93□□□□□ -1.14
ATXN3-245ENST00000556958 GMPSP49915 693 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-245ENST00000556958 TNIP1Q15025 636 aa7.93□□□□□ -1.14
ATXN3-245ENST00000556958 KRT26Q7Z3Y9 468 aa7.93□□□□□ -1.14
ATXN3-245ENST00000556958 SLC52A2Q9HAB3 445 aa7.93□□□□□ -1.14
ATXN3-245ENST00000556958 ZNF330Q9Y3S2 320 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-245ENST00000556958 CDHR2Q9BYE9 1310 aa7.93□□□□□ -1.14
ATXN3-245ENST00000556958 H0YGN5 161 aa7.92□□□□□ -1.14
ATXN3-245ENST00000556958 GTF2E1P29083 439 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-245ENST00000556958 IL6STP40189 918 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-245ENST00000556958 HIRAP54198 1017 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-245ENST00000556958 CXCL9Q07325 125 aa7.92□□□□□ -1.14
ATXN3-245ENST00000556958 EIF4A2Q14240 407 aaKnown RBP7.92□□□□□ -1.14
ATXN3-245ENST00000556958 CLEC4GQ6UXB4 293 aa7.92□□□□□ -1.14
ATXN3-245ENST00000556958 DCPSQ96C86 337 aaKnown RBP7.92□□□□□ -1.14
ATXN3-245ENST00000556958 ZNRF3Q9ULT6 936 aa7.92□□□□□ -1.14
ATXN3-245ENST00000556958 ITGB4P16144 1822 aa7.92□□□□□ -1.14
ATXN3-245ENST00000556958 PPIP5K2O43314 1243 aa7.91□□□□□ -1.14
ATXN3-245ENST00000556958 EN2P19622 333 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-245ENST00000556958 SLC39A6Q13433 755 aa7.91□□□□□ -1.14
ATXN3-245ENST00000556958 TRAF7Q6Q0C0 670 aa7.91□□□□□ -1.14
ATXN3-245ENST00000556958 CNOT7Q9UIV1 285 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms